RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 HNRNPMP52272 730 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAF1-212ENST00000494557 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
RAF1-212ENST00000494557 TESK2Q96S53 571 aa11.86□□□□□ -0.51
RAF1-212ENST00000494557 KIF13AQ9H1H9 1805 aa11.85□□□□□ -0.51
RAF1-212ENST00000494557 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
RAF1-212ENST00000494557 EFCAB2Q5VUJ9 269 aa11.84□□□□□ -0.51
RAF1-212ENST00000494557 PIK3C2GO75747 1445 aa11.84□□□□□ -0.51
RAF1-212ENST00000494557 PER1O15534 1290 aaPredicted RBP11.83□□□□□ -0.52
RAF1-212ENST00000494557 VIRMAQ69YN4 1812 aaKnown RBP11.82□□□□□ -0.52
RAF1-212ENST00000494557 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
RAF1-212ENST00000494557 RIMBP3CA6NJZ7 1639 aa11.81□□□□□ -0.52
RAF1-212ENST00000494557 RIMBP3BA6NNM3 1639 aa11.81□□□□□ -0.52
RAF1-212ENST00000494557 RIMBP3Q9UFD9 1639 aa11.81□□□□□ -0.52
RAF1-212ENST00000494557 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
RAF1-212ENST00000494557 ASXL1Q8IXJ9 1541 aa11.8□□□□□ -0.52
RAF1-212ENST00000494557 SPATA31D1Q6ZQQ2 1576 aa11.79□□□□□ -0.52
RAF1-212ENST00000494557 FBLN2P98095 1184 aa11.78□□□□□ -0.52
RAF1-212ENST00000494557 DISP3Q9P2K9 1392 aa11.78□□□□□ -0.52
RAF1-212ENST00000494557 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
RAF1-212ENST00000494557 ADGRB2O60241 1585 aa11.77□□□□□ -0.52
RAF1-212ENST00000494557 RALBP1Q15311 655 aa11.77□□□□□ -0.52
RAF1-212ENST00000494557 NPATQ14207 1427 aa11.77□□□□□ -0.52
RAF1-212ENST00000494557 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
RAF1-212ENST00000494557 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
RAF1-212ENST00000494557 CCDC184Q52MB2 194 aa11.76□□□□□ -0.53
RAF1-212ENST00000494557 CDC42BPGQ6DT37 1551 aa11.76□□□□□ -0.53
RAF1-212ENST00000494557 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
RAF1-212ENST00000494557 DLC1Q96QB1 1528 aa11.76□□□□□ -0.53
RAF1-212ENST00000494557 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
RAF1-212ENST00000494557 ARHGEF40Q8TER5 1519 aa11.75□□□□□ -0.53
RAF1-212ENST00000494557 ARID3CA6NKF2 412 aa11.75□□□□□ -0.53
RAF1-212ENST00000494557 HIRIP3Q9BW71 556 aaPredicted RBP11.75□□□□□ -0.53
RAF1-212ENST00000494557 USP54Q70EL1 1684 aa11.74□□□□□ -0.53
RAF1-212ENST00000494557 SPAG9O60271 1321 aaKnown RBP11.73□□□□□ -0.53
RAF1-212ENST00000494557 MED14O60244 1454 aa11.73□□□□□ -0.53
RAF1-212ENST00000494557 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
RAF1-212ENST00000494557 IQSEC2Q5JU85 1478 aa11.72□□□□□ -0.53
RAF1-212ENST00000494557 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
RAF1-212ENST00000494557 TULP4Q9NRJ4 1543 aa11.71□□□□□ -0.53
RAF1-212ENST00000494557 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
RAF1-212ENST00000494557 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.53
RAF1-212ENST00000494557 AKAP12Q02952 1782 aa11.71□□□□□ -0.54
RAF1-212ENST00000494557 CD109Q6YHK3 1445 aa11.71□□□□□ -0.54
RAF1-212ENST00000494557 KANK1Q14678 1352 aa11.7□□□□□ -0.54
RAF1-212ENST00000494557 MON2Q7Z3U7 1717 aa11.7□□□□□ -0.54
RAF1-212ENST00000494557 CARD11Q9BXL7 1154 aa11.69□□□□□ -0.54
RAF1-212ENST00000494557 EIF3AQ14152 1382 aaKnown RBP11.68□□□□□ -0.54
RAF1-212ENST00000494557 ST20-MTHFSA0A0A6YYL1 179 aa11.68□□□□□ -0.54
RAF1-212ENST00000494557 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
RAF1-212ENST00000494557 RPGRIP1LQ68CZ1 1315 aa11.68□□□□□ -0.54
RAF1-212ENST00000494557 NRKQ7Z2Y5 1582 aa11.68□□□□□ -0.54
RAF1-212ENST00000494557 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
RAF1-212ENST00000494557 PTPRMP28827 1452 aa11.66□□□□□ -0.54
RAF1-212ENST00000494557 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
RAF1-212ENST00000494557 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
RAF1-212ENST00000494557 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
RAF1-212ENST00000494557 UBR1Q8IWV7 1749 aa11.64□□□□□ -0.55
RAF1-212ENST00000494557 CPS1P31327 1500 aa11.64□□□□□ -0.55
RAF1-212ENST00000494557 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
RAF1-212ENST00000494557 NBPF1Q3BBV0 1214 aa11.64□□□□□ -0.55
RAF1-212ENST00000494557 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
RAF1-212ENST00000494557 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
RAF1-212ENST00000494557 NLRP13Q86W25 1043 aa11.63□□□□□ -0.55
RAF1-212ENST00000494557 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
RAF1-212ENST00000494557 LRRC7Q96NW7 1537 aa11.62□□□□□ -0.55
RAF1-212ENST00000494557 NINLQ9Y2I6 1382 aa11.61□□□□□ -0.55
RAF1-212ENST00000494557 C3P01024 1663 aa11.61□□□□□ -0.55
RAF1-212ENST00000494557 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
RAF1-212ENST00000494557 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
RAF1-212ENST00000494557 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
RAF1-212ENST00000494557 CD163L1Q9NR16 1453 aa11.6□□□□□ -0.55
RAF1-212ENST00000494557 POLR3AO14802 1390 aaPredicted RBP11.6□□□□□ -0.55
RAF1-212ENST00000494557 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
RAF1-212ENST00000494557 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
RAF1-212ENST00000494557 TRMT2AQ8IZ69 625 aaKnown RBP11.59□□□□□ -0.55
RAF1-212ENST00000494557 NSD2O96028 1365 aa11.59□□□□□ -0.55
RAF1-212ENST00000494557 PPP4R2Q9NY27 417 aa11.58□□□□□ -0.56
RAF1-212ENST00000494557 FKBP8Q14318 412 aa11.58□□□□□ -0.56
RAF1-212ENST00000494557 PPP6R1Q9UPN7 881 aa11.58□□□□□ -0.56
RAF1-212ENST00000494557 TECPR2O15040 1411 aa11.57□□□□□ -0.56
RAF1-212ENST00000494557 TMF1P82094 1093 aa11.57□□□□□ -0.56
RAF1-212ENST00000494557 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
RAF1-212ENST00000494557 RGPD1P0DJD0 1748 aa11.57□□□□□ -0.56
RAF1-212ENST00000494557 C14orf93Q9H972 538 aaKnown RBP11.56□□□□□ -0.56
RAF1-212ENST00000494557 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
RAF1-212ENST00000494557 ITSN1Q15811 1721 aa11.56□□□□□ -0.56
RAF1-212ENST00000494557 NGEFQ8N5V2 710 aa11.56□□□□□ -0.56
RAF1-212ENST00000494557 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
RAF1-212ENST00000494557 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
RAF1-212ENST00000494557 PLPPR3Q6T4P5 718 aa11.55□□□□□ -0.56
RAF1-212ENST00000494557 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
RAF1-212ENST00000494557 YEATS2Q9ULM3 1422 aa11.54□□□□□ -0.56
RAF1-212ENST00000494557 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
RAF1-212ENST00000494557 DIP2AQ14689 1571 aa11.52□□□□□ -0.56
RAF1-212ENST00000494557 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.56
RAF1-212ENST00000494557 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.57
RAF1-212ENST00000494557 ATP7BP35670 1465 aa11.51□□□□□ -0.57
RAF1-212ENST00000494557 ADGRF5Q8IZF2 1346 aa11.51□□□□□ -0.57
RAF1-212ENST00000494557 XRN1Q8IZH2 1706 aaKnown RBP11.5□□□□□ -0.57
RAF1-212ENST00000494557 FMN2Q9NZ56 1722 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms