RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
SSB-212ENST00000494051 BCAMP50895 628 aa12.68□□□□□ -0.38
SSB-212ENST00000494051 RNF40O75150 1001 aa12.67□□□□□ -0.38
SSB-212ENST00000494051 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
SSB-212ENST00000494051 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
SSB-212ENST00000494051 TRIM66O15016 1216 aa12.65□□□□□ -0.38
SSB-212ENST00000494051 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
SSB-212ENST00000494051 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
SSB-212ENST00000494051 PTPN5P54829 565 aa12.63□□□□□ -0.39
SSB-212ENST00000494051 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
SSB-212ENST00000494051 SLF2Q8IX21 1173 aa12.62□□□□□ -0.39
SSB-212ENST00000494051 DAXXQ9UER7 740 aaPredicted RBP12.62□□□□□ -0.39
SSB-212ENST00000494051 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
SSB-212ENST00000494051 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
SSB-212ENST00000494051 CLCN1P35523 988 aa12.6□□□□□ -0.39
SSB-212ENST00000494051 PPP4CP60510 307 aa12.6□□□□□ -0.39
SSB-212ENST00000494051 AMHR2Q16671 573 aa12.59□□□□□ -0.39
SSB-212ENST00000494051 TSR3Q9UJK0 312 aaKnown RBP12.59□□□□□ -0.39
SSB-212ENST00000494051 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
SSB-212ENST00000494051 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
SSB-212ENST00000494051 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
SSB-212ENST00000494051 PDE4DQ08499 809 aa12.57□□□□□ -0.4
SSB-212ENST00000494051 HCSTQ9UBK5 93 aa12.57□□□□□ -0.4
SSB-212ENST00000494051 RSPH4AQ5TD94 716 aa12.55□□□□□ -0.4
SSB-212ENST00000494051 SULF1Q8IWU6 871 aa12.55□□□□□ -0.4
SSB-212ENST00000494051 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
SSB-212ENST00000494051 REPIN1Q9BWE0 567 aaKnown RBP12.55□□□□□ -0.4
SSB-212ENST00000494051 PARP9Q8IXQ6 854 aa12.54□□□□□ -0.4
SSB-212ENST00000494051 SLC10A3P09131 477 aa12.53□□□□□ -0.4
SSB-212ENST00000494051 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
SSB-212ENST00000494051 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
SSB-212ENST00000494051 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
SSB-212ENST00000494051 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
SSB-212ENST00000494051 CFHP08603 1231 aa12.49□□□□□ -0.41
SSB-212ENST00000494051 SSTR3P32745 418 aaPredicted RBP12.49□□□□□ -0.41
SSB-212ENST00000494051 NYAP1Q6ZVC0 841 aa12.48□□□□□ -0.41
SSB-212ENST00000494051 APLP1P51693 650 aa12.47□□□□□ -0.41
SSB-212ENST00000494051 GPBP1L1Q9HC44 474 aaPredicted RBP12.47□□□□□ -0.41
SSB-212ENST00000494051 CD46P15529 392 aa12.46□□□□□ -0.41
SSB-212ENST00000494051 KMT5BQ4FZB7 885 aa12.46□□□□□ -0.41
SSB-212ENST00000494051 PRR14Q9BWN1 585 aa12.45□□□□□ -0.42
SSB-212ENST00000494051 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
SSB-212ENST00000494051 MS4A1P11836 297 aa12.43□□□□□ -0.42
SSB-212ENST00000494051 GCGRP47871 477 aa12.43□□□□□ -0.42
SSB-212ENST00000494051 KDM4CQ9H3R0 1056 aa12.42□□□□□ -0.42
SSB-212ENST00000494051 BEGAINQ9BUH8 593 aa12.41□□□□□ -0.42
SSB-212ENST00000494051 ACTN4O43707 911 aaKnown RBP12.4□□□□□ -0.42
SSB-212ENST00000494051 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
SSB-212ENST00000494051 PCDHB3Q9Y5E6 796 aa12.38□□□□□ -0.43
SSB-212ENST00000494051 KDM4AO75164 1064 aa12.37□□□□□ -0.43
SSB-212ENST00000494051 FUT2Q10981 343 aa12.37□□□□□ -0.43
SSB-212ENST00000494051 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
SSB-212ENST00000494051 COPS2P61201 443 aa12.36□□□□□ -0.43
SSB-212ENST00000494051 PUS10Q3MIT2 529 aaKnown RBP12.36□□□□□ -0.43
SSB-212ENST00000494051 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
SSB-212ENST00000494051 BLOC1S3Q6QNY0 202 aa12.34□□□□□ -0.43
SSB-212ENST00000494051 MTRQ99707 1265 aa12.34□□□□□ -0.43
SSB-212ENST00000494051 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
SSB-212ENST00000494051 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
SSB-212ENST00000494051 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
SSB-212ENST00000494051 USP46P62068 366 aa12.31□□□□□ -0.44
SSB-212ENST00000494051 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
SSB-212ENST00000494051 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
SSB-212ENST00000494051 IRX2Q9BZI1 471 aaPredicted RBP12.3□□□□□ -0.44
SSB-212ENST00000494051 IL21Q9HBE4 155 aa12.3□□□□□ -0.44
SSB-212ENST00000494051 MORN1Q5T089 497 aa12.29□□□□□ -0.44
SSB-212ENST00000494051 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
SSB-212ENST00000494051 HOXA2O43364 376 aa12.28□□□□□ -0.44
SSB-212ENST00000494051 NR1I2O75469 434 aa12.28□□□□□ -0.44
SSB-212ENST00000494051 KCNC4Q03721 635 aa12.28□□□□□ -0.44
SSB-212ENST00000494051 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
SSB-212ENST00000494051 HLA-CQ95604 372 aa12.28□□□□□ -0.44
SSB-212ENST00000494051 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
SSB-212ENST00000494051 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
SSB-212ENST00000494051 SCUBE3Q8IX30 993 aa12.27□□□□□ -0.45
SSB-212ENST00000494051 IL27Q8NEV9 243 aa12.27□□□□□ -0.45
SSB-212ENST00000494051 SLC27A5Q9Y2P5 690 aa12.26□□□□□ -0.45
SSB-212ENST00000494051 MOXD2PA6NHM9 499 aa12.25□□□□□ -0.45
SSB-212ENST00000494051 ZPR1O75312 459 aa12.25□□□□□ -0.45
SSB-212ENST00000494051 NDUFV2P19404 249 aa12.25□□□□□ -0.45
SSB-212ENST00000494051 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
SSB-212ENST00000494051 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
SSB-212ENST00000494051 FDX1P10109 184 aa12.22□□□□□ -0.45
SSB-212ENST00000494051 MYSM1Q5VVJ2 828 aa12.22□□□□□ -0.45
SSB-212ENST00000494051 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
SSB-212ENST00000494051 TLL1O43897 1013 aa12.21□□□□□ -0.45
SSB-212ENST00000494051 RGS20O76081 388 aa12.21□□□□□ -0.45
SSB-212ENST00000494051 NKX2-3Q8TAU0 364 aa12.21□□□□□ -0.45
SSB-212ENST00000494051 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
SSB-212ENST00000494051 POLR3EQ9NVU0 708 aa12.2□□□□□ -0.46
SSB-212ENST00000494051 Q3C1V9 767 aa12.19□□□□□ -0.46
SSB-212ENST00000494051 FMNL1O95466 1100 aaPredicted RBP12.18□□□□□ -0.46
SSB-212ENST00000494051 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
SSB-212ENST00000494051 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
SSB-212ENST00000494051 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
SSB-212ENST00000494051 SPTLC1O15269 473 aa12.17□□□□□ -0.46
SSB-212ENST00000494051 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
SSB-212ENST00000494051 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
SSB-212ENST00000494051 SPSB2Q99619 263 aa12.17□□□□□ -0.46
SSB-212ENST00000494051 BRICD5Q6PL45 260 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms