RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 TMEM2Q9UHN6 1383 aa21.47■■□□□ 1.03
ACTB-213ENST00000493945 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
ACTB-213ENST00000493945 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
ACTB-213ENST00000493945 IFT172Q9UG01 1749 aa21.46■■□□□ 1.03
ACTB-213ENST00000493945 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.03
ACTB-213ENST00000493945 POLR1AO95602 1720 aaPredicted RBP21.45■■□□□ 1.02
ACTB-213ENST00000493945 RIMS2Q9UQ26 1411 aa21.45■■□□□ 1.02
ACTB-213ENST00000493945 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
ACTB-213ENST00000493945 MYOM2P54296 1465 aa21.44■■□□□ 1.02
ACTB-213ENST00000493945 ARHGAP23Q9P227 1491 aa21.44■■□□□ 1.02
ACTB-213ENST00000493945 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
ACTB-213ENST00000493945 ZEB1P37275 1124 aaPredicted RBP21.42■■□□□ 1.02
ACTB-213ENST00000493945 ANKLE2Q86XL3 938 aa21.42■■□□□ 1.02
ACTB-213ENST00000493945 SCAF11Q99590 1463 aaKnown RBP21.42■■□□□ 1.02
ACTB-213ENST00000493945 ZFYVE9O95405 1425 aa21.4■■□□□ 1.02
ACTB-213ENST00000493945 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
ACTB-213ENST00000493945 LAMC1P11047 1609 aa21.38■■□□□ 1.01
ACTB-213ENST00000493945 TXNDC2Q86VQ3 553 aa21.37■■□□□ 1.01
ACTB-213ENST00000493945 L3MBTL2Q969R5 705 aa21.36■■□□□ 1.01
ACTB-213ENST00000493945 PLEKHG1Q9ULL1 1385 aa21.35■■□□□ 1.01
ACTB-213ENST00000493945 BCANQ96GW7 911 aa21.34■■□□□ 1.01
ACTB-213ENST00000493945 DIP2AQ14689 1571 aa21.34■■□□□ 1.01
ACTB-213ENST00000493945 KDM2AQ9Y2K7 1162 aa21.33■■□□□ 1.01
ACTB-213ENST00000493945 IQGAP1P46940 1657 aa21.33■■□□□ 1
ACTB-213ENST00000493945 SETBP1Q9Y6X0 1596 aa21.31■■□□□ 1
ACTB-213ENST00000493945 KIAA1210Q9ULL0 1709 aa21.31■■□□□ 1
ACTB-213ENST00000493945 MED14O60244 1454 aa21.31■■□□□ 1
ACTB-213ENST00000493945 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
ACTB-213ENST00000493945 PIK3C2GO75747 1445 aa21.3■■□□□ 1
ACTB-213ENST00000493945 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
ACTB-213ENST00000493945 NPHP4O75161 1426 aaPredicted RBP21.29■■□□□ 1
ACTB-213ENST00000493945 HSPA2P54652 639 aa21.29■■□□□ 1
ACTB-213ENST00000493945 PRAG1Q86YV5 1406 aa21.29■■□□□ 1
ACTB-213ENST00000493945 NUTM2DQ5VT03 806 aaPredicted RBP21.27■■□□□ 1
ACTB-213ENST00000493945 LTKP29376 864 aa21.26■□□□□ 0.99
ACTB-213ENST00000493945 ADGRF5Q8IZF2 1346 aa21.25■□□□□ 0.99
ACTB-213ENST00000493945 STRCQ7RTU9 1775 aa21.23■□□□□ 0.99
ACTB-213ENST00000493945 NCKAP5LQ9HCH0 1330 aa21.23■□□□□ 0.99
ACTB-213ENST00000493945 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
ACTB-213ENST00000493945 ALKQ9UM73 1620 aa21.22■□□□□ 0.99
ACTB-213ENST00000493945 NRXN3Q9Y4C0 1643 aa21.22■□□□□ 0.99
ACTB-213ENST00000493945 RALGAPBQ86X10 1494 aa21.21■□□□□ 0.99
ACTB-213ENST00000493945 PIK3R4Q99570 1358 aa21.21■□□□□ 0.99
ACTB-213ENST00000493945 ROCK2O75116 1388 aaKnown RBP21.2■□□□□ 0.98
ACTB-213ENST00000493945 C14orf93Q9H972 538 aaKnown RBP21.19■□□□□ 0.98
ACTB-213ENST00000493945 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
ACTB-213ENST00000493945 ADAMTS13Q76LX8 1427 aa21.17■□□□□ 0.98
ACTB-213ENST00000493945 SETD1AO15047 1707 aaKnown RBP21.17■□□□□ 0.98
ACTB-213ENST00000493945 EIF3AQ14152 1382 aaKnown RBP21.15■□□□□ 0.98
ACTB-213ENST00000493945 CFAP70Q5T0N1 1121 aa21.14■□□□□ 0.97
ACTB-213ENST00000493945 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
ACTB-213ENST00000493945 KNDC1Q76NI1 1749 aa21.12■□□□□ 0.97
ACTB-213ENST00000493945 GPRASP1Q5JY77 1395 aa21.11■□□□□ 0.97
ACTB-213ENST00000493945 CARD11Q9BXL7 1154 aa21.11■□□□□ 0.97
ACTB-213ENST00000493945 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
ACTB-213ENST00000493945 CHD2O14647 1828 aaKnown RBP21.11■□□□□ 0.97
ACTB-213ENST00000493945 ADGRB1O14514 1584 aa21.1■□□□□ 0.97
ACTB-213ENST00000493945 NBPF8Q3BBV2 869 aa21.1■□□□□ 0.97
ACTB-213ENST00000493945 YTHDC2Q9H6S0 1430 aaKnown RBP21.09■□□□□ 0.97
ACTB-213ENST00000493945 NWD1Q149M9 1564 aa21.09■□□□□ 0.97
ACTB-213ENST00000493945 LRPPRCP42704 1394 aaKnown RBP21.09■□□□□ 0.97
ACTB-213ENST00000493945 NKTRP30414 1462 aaKnown RBP21.08■□□□□ 0.97
ACTB-213ENST00000493945 ASXL1Q8IXJ9 1541 aa21.07■□□□□ 0.96
ACTB-213ENST00000493945 DLC1Q96QB1 1528 aa21.07■□□□□ 0.96
ACTB-213ENST00000493945 METP08581 1390 aa21.07■□□□□ 0.96
ACTB-213ENST00000493945 XRN1Q8IZH2 1706 aaKnown RBP21.07■□□□□ 0.96
ACTB-213ENST00000493945 PTCH1Q13635 1447 aa21.06■□□□□ 0.96
ACTB-213ENST00000493945 CPS1P31327 1500 aa21.06■□□□□ 0.96
ACTB-213ENST00000493945 TECPR2O15040 1411 aa21.05■□□□□ 0.96
ACTB-213ENST00000493945 KCNA6P17658 529 aa21.05■□□□□ 0.96
ACTB-213ENST00000493945 ABCC11Q96J66 1382 aa21.05■□□□□ 0.96
ACTB-213ENST00000493945 SLC24A1O60721 1099 aa21.03■□□□□ 0.96
ACTB-213ENST00000493945 TMEM132EQ6IEE7 984 aa21.03■□□□□ 0.96
ACTB-213ENST00000493945 ARHGEF28Q8N1W1 1705 aaKnown RBP21.03■□□□□ 0.96
ACTB-213ENST00000493945 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
ACTB-213ENST00000493945 AMOTL2Q9Y2J4 779 aa21.02■□□□□ 0.96
ACTB-213ENST00000493945 FAM135BQ49AJ0 1406 aa21.02■□□□□ 0.96
ACTB-213ENST00000493945 STK26Q9P289 416 aa21.01■□□□□ 0.95
ACTB-213ENST00000493945 USP47Q96K76 1375 aa21■□□□□ 0.95
ACTB-213ENST00000493945 EIF4G2P78344 907 aaKnown RBP eCLIP21■□□□□ 0.95
ACTB-213ENST00000493945 SIRT1Q96EB6 747 aa21■□□□□ 0.95
ACTB-213ENST00000493945 POGKQ9P215 609 aa21■□□□□ 0.95
ACTB-213ENST00000493945 TRAK1Q9UPV9 953 aa20.99■□□□□ 0.95
ACTB-213ENST00000493945 PTPRUQ92729 1446 aa20.97■□□□□ 0.95
ACTB-213ENST00000493945 CENPJQ9HC77 1338 aaPredicted RBP20.96■□□□□ 0.95
ACTB-213ENST00000493945 QRICH2Q9H0J4 1663 aa20.96■□□□□ 0.95
ACTB-213ENST00000493945 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.95
ACTB-213ENST00000493945 PROSER2Q86WR7 435 aaPredicted RBP20.94■□□□□ 0.94
ACTB-213ENST00000493945 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
ACTB-213ENST00000493945 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
ACTB-213ENST00000493945 PRAM1Q96QH2 718 aa20.93■□□□□ 0.94
ACTB-213ENST00000493945 STRCP1A6NGW2 1772 aa20.92■□□□□ 0.94
ACTB-213ENST00000493945 ROBO2Q9HCK4 1378 aa20.92■□□□□ 0.94
ACTB-213ENST00000493945 SBNO2Q9Y2G9 1366 aa20.92■□□□□ 0.94
ACTB-213ENST00000493945 ADGRB2O60241 1585 aa20.89■□□□□ 0.93
ACTB-213ENST00000493945 ADGRL3Q9HAR2 1447 aa20.88■□□□□ 0.93
ACTB-213ENST00000493945 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
ACTB-213ENST00000493945 MSH6P52701 1360 aa20.87■□□□□ 0.93
ACTB-213ENST00000493945 TMEM94Q12767 1356 aa20.86■□□□□ 0.93
ACTB-213ENST00000493945 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms