RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 HRO43593 1189 aa7.83□□□□□ -1.16
GTF3A-208ENST00000493903 CLCN1P35523 988 aa7.83□□□□□ -1.16
GTF3A-208ENST00000493903 TMUB1Q9BVT8 246 aa7.83□□□□□ -1.16
GTF3A-208ENST00000493903 CCDC9Q9Y3X0 531 aaKnown RBP7.83□□□□□ -1.16
GTF3A-208ENST00000493903 PADI6Q6TGC4 694 aa7.82□□□□□ -1.16
GTF3A-208ENST00000493903 KIAA1468Q9P260 1216 aa7.82□□□□□ -1.16
GTF3A-208ENST00000493903 FAM198AQ9UFP1 575 aa7.82□□□□□ -1.16
GTF3A-208ENST00000493903 BHMG1C9JSJ3 638 aaPredicted RBP7.81□□□□□ -1.16
GTF3A-208ENST00000493903 SKIV2LQ15477 1246 aaKnown RBP7.81□□□□□ -1.16
GTF3A-208ENST00000493903 RABGEF1Q9UJ41 708 aa7.81□□□□□ -1.16
GTF3A-208ENST00000493903 C3orf80F5H4A9 247 aa7.8□□□□□ -1.16
GTF3A-208ENST00000493903 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
GTF3A-208ENST00000493903 REPIN1Q9BWE0 567 aaKnown RBP7.8□□□□□ -1.16
GTF3A-208ENST00000493903 GPCPD1Q9NPB8 672 aa7.8□□□□□ -1.16
GTF3A-208ENST00000493903 RBM27Q9P2N5 1060 aaKnown RBP7.8□□□□□ -1.16
GTF3A-208ENST00000493903 PACS2Q86VP3 889 aa7.79□□□□□ -1.16
GTF3A-208ENST00000493903 TTC13Q8NBP0 860 aa7.79□□□□□ -1.16
GTF3A-208ENST00000493903 NBPF3Q9H094 633 aa7.79□□□□□ -1.16
GTF3A-208ENST00000493903 SEPT9Q9UHD8 586 aaPredicted RBP7.79□□□□□ -1.16
GTF3A-208ENST00000493903 SERPINA10Q9UK55 444 aa7.79□□□□□ -1.16
GTF3A-208ENST00000493903 RAD21O60216 631 aa7.78□□□□□ -1.16
GTF3A-208ENST00000493903 STAC3Q96MF2 364 aa7.78□□□□□ -1.16
GTF3A-208ENST00000493903 MYT1LQ9UL68 1186 aa7.78□□□□□ -1.16
GTF3A-208ENST00000493903 SMAPO00193 183 aa7.77□□□□□ -1.17
GTF3A-208ENST00000493903 MMRN1Q13201 1228 aa7.77□□□□□ -1.17
GTF3A-208ENST00000493903 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
GTF3A-208ENST00000493903 MRPL50Q8N5N7 158 aaKnown RBP7.77□□□□□ -1.17
GTF3A-208ENST00000493903 TRAIPQ9BWF2 469 aa7.77□□□□□ -1.17
GTF3A-208ENST00000493903 SSTR3P32745 418 aaPredicted RBP7.76□□□□□ -1.17
GTF3A-208ENST00000493903 FAM161AQ3B820 660 aa7.76□□□□□ -1.17
GTF3A-208ENST00000493903 NUDT18Q6ZVK8 323 aa7.76□□□□□ -1.17
GTF3A-208ENST00000493903 TATDN2Q93075 761 aa7.76□□□□□ -1.17
GTF3A-208ENST00000493903 CCDC97Q96F63 343 aaPredicted RBP7.76□□□□□ -1.17
GTF3A-208ENST00000493903 PLSCR2Q9NRY7 297 aa7.76□□□□□ -1.17
GTF3A-208ENST00000493903 SPDYE5A6NIY4 337 aa7.75□□□□□ -1.17
GTF3A-208ENST00000493903 NBPF26B4DH59 902 aa7.75□□□□□ -1.17
GTF3A-208ENST00000493903 KCTD17Q8N5Z5 321 aa7.75□□□□□ -1.17
GTF3A-208ENST00000493903 NECTIN2Q92692 538 aa7.75□□□□□ -1.17
GTF3A-208ENST00000493903 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
GTF3A-208ENST00000493903 MDM2Q00987 491 aaPredicted RBP7.74□□□□□ -1.17
GTF3A-208ENST00000493903 ZNF777Q9ULD5 760 aaPredicted RBP7.74□□□□□ -1.17
GTF3A-208ENST00000493903 ADGRG1Q9Y653 693 aa7.74□□□□□ -1.17
GTF3A-208ENST00000493903 FAM98CQ17RN3 349 aaKnown RBP7.73□□□□□ -1.17
GTF3A-208ENST00000493903 LAPTM4BQ86VI4 370 aa7.73□□□□□ -1.17
GTF3A-208ENST00000493903 BANK1Q8NDB2 785 aa7.73□□□□□ -1.17
GTF3A-208ENST00000493903 RNF166Q96A37 237 aaPredicted RBP7.73□□□□□ -1.17
GTF3A-208ENST00000493903 GOLGA8CPA6NN73 597 aa7.72□□□□□ -1.17
GTF3A-208ENST00000493903 KCTD12Q96CX2 325 aaKnown RBP7.72□□□□□ -1.17
GTF3A-208ENST00000493903 ZFRQ96KR1 1074 aaKnown RBP7.72□□□□□ -1.17
GTF3A-208ENST00000493903 BEGAINQ9BUH8 593 aa7.72□□□□□ -1.17
GTF3A-208ENST00000493903 WNT2BQ93097 391 aa7.71□□□□□ -1.18
GTF3A-208ENST00000493903 EYA1Q99502 592 aa7.71□□□□□ -1.18
GTF3A-208ENST00000493903 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.71□□□□□ -1.18
GTF3A-208ENST00000493903 FAM217BQ9NTX9 383 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-208ENST00000493903 OATP04181 439 aa7.7□□□□□ -1.18
GTF3A-208ENST00000493903 DIXDC1Q155Q3 683 aa7.7□□□□□ -1.18
GTF3A-208ENST00000493903 PROCA1Q8NCQ7 364 aaPredicted RBP7.7□□□□□ -1.18
GTF3A-208ENST00000493903 PHOX2BQ99453 314 aa7.7□□□□□ -1.18
GTF3A-208ENST00000493903 RBM46Q8TBY0 533 aaKnown RBP7.69□□□□□ -1.18
GTF3A-208ENST00000493903 POM121Q96HA1 1249 aa7.69□□□□□ -1.18
GTF3A-208ENST00000493903 ATP1B4Q9UN42 357 aaPredicted RBP7.69□□□□□ -1.18
GTF3A-208ENST00000493903 COG6Q9Y2V7 657 aa7.69□□□□□ -1.18
GTF3A-208ENST00000493903 BCAMP50895 628 aa7.68□□□□□ -1.18
GTF3A-208ENST00000493903 MYSM1Q5VVJ2 828 aa7.68□□□□□ -1.18
GTF3A-208ENST00000493903 METTL3Q86U44 580 aaKnown RBP7.68□□□□□ -1.18
GTF3A-208ENST00000493903 ANKK1Q8NFD2 765 aa7.68□□□□□ -1.18
GTF3A-208ENST00000493903 PXYLP1Q8TE99 480 aa7.68□□□□□ -1.18
GTF3A-208ENST00000493903 POLR3EQ9NVU0 708 aa7.68□□□□□ -1.18
GTF3A-208ENST00000493903 CLK2P49760 499 aaKnown RBP7.67□□□□□ -1.18
GTF3A-208ENST00000493903 TMEM259Q4ZIN3 620 aa7.67□□□□□ -1.18
GTF3A-208ENST00000493903 THSD4Q6ZMP0 1018 aa7.67□□□□□ -1.18
GTF3A-208ENST00000493903 SAMD7Q7Z3H4 446 aa7.67□□□□□ -1.18
GTF3A-208ENST00000493903 RCCD1A6NED2 376 aa7.66□□□□□ -1.18
GTF3A-208ENST00000493903 SOCS7O14512 581 aa7.66□□□□□ -1.18
GTF3A-208ENST00000493903 NLRP7Q8WX94 980 aa7.66□□□□□ -1.18
GTF3A-208ENST00000493903 SOWAHBA6NEL2 793 aa7.65□□□□□ -1.18
GTF3A-208ENST00000493903 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
GTF3A-208ENST00000493903 DNAJB2P25686 324 aa7.65□□□□□ -1.18
GTF3A-208ENST00000493903 RFC5P40937 340 aa7.65□□□□□ -1.18
GTF3A-208ENST00000493903 PTPN5P54829 565 aa7.65□□□□□ -1.18
GTF3A-208ENST00000493903 PDE4CQ08493 712 aa7.65□□□□□ -1.18
GTF3A-208ENST00000493903 SWT1Q5T5J6 900 aaKnown RBP7.65□□□□□ -1.18
GTF3A-208ENST00000493903 LRCH3Q96II8 777 aa7.65□□□□□ -1.18
GTF3A-208ENST00000493903 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.65□□□□□ -1.18
GTF3A-208ENST00000493903 ZNF330Q9Y3S2 320 aaPredicted RBP7.65□□□□□ -1.18
GTF3A-208ENST00000493903 PPP2R2DQ66LE6 453 aa7.64□□□□□ -1.19
GTF3A-208ENST00000493903 WWC1Q8IX03 1113 aa7.64□□□□□ -1.19
GTF3A-208ENST00000493903 TMEM134Q9H6X4 195 aa7.64□□□□□ -1.19
GTF3A-208ENST00000493903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.63□□□□□ -1.19
GTF3A-208ENST00000493903 RNF40O75150 1001 aa7.63□□□□□ -1.19
GTF3A-208ENST00000493903 TUSC1Q2TAM9 212 aa7.63□□□□□ -1.19
GTF3A-208ENST00000493903 HDGFP51858 240 aaKnown RBP7.62□□□□□ -1.19
GTF3A-208ENST00000493903 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
GTF3A-208ENST00000493903 SNRKQ9NRH2 765 aa7.62□□□□□ -1.19
GTF3A-208ENST00000493903 HPS5Q9UPZ3 1129 aa7.62□□□□□ -1.19
GTF3A-208ENST00000493903 RETREG2Q8NC44 543 aa7.61□□□□□ -1.19
GTF3A-208ENST00000493903 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
GTF3A-208ENST00000493903 WBP1LQ9NX94 342 aa7.61□□□□□ -1.19
GTF3A-208ENST00000493903 HCSTQ9UBK5 93 aa7.61□□□□□ -1.19
GTF3A-208ENST00000493903 AEBP1Q8IUX7 1158 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms