RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 PHOX2BQ99453 314 aa9.1□□□□□ -0.95
CD46-217ENST00000493796 TSR3Q9UJK0 312 aaKnown RBP9.1□□□□□ -0.95
CD46-217ENST00000493796 SLF2Q8IX21 1173 aa9.09□□□□□ -0.95
CD46-217ENST00000493796 KRI1Q8N9T8 703 aaKnown RBP9.09□□□□□ -0.95
CD46-217ENST00000493796 WBP1LQ9NX94 342 aa9.09□□□□□ -0.95
CD46-217ENST00000493796 RNF40O75150 1001 aa9.07□□□□□ -0.96
CD46-217ENST00000493796 PPP4CP60510 307 aa9.07□□□□□ -0.96
CD46-217ENST00000493796 NLRP7Q8WX94 980 aa9.07□□□□□ -0.96
CD46-217ENST00000493796 SLC4A3P48751 1232 aa9.06□□□□□ -0.96
CD46-217ENST00000493796 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
CD46-217ENST00000493796 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
CD46-217ENST00000493796 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
CD46-217ENST00000493796 SLC10A3P09131 477 aa9.01□□□□□ -0.97
CD46-217ENST00000493796 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
CD46-217ENST00000493796 AK7Q96M32 723 aa9.01□□□□□ -0.97
CD46-217ENST00000493796 APLP1P51693 650 aa9□□□□□ -0.97
CD46-217ENST00000493796 SLC24A3Q9HC58 644 aa9□□□□□ -0.97
CD46-217ENST00000493796 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
CD46-217ENST00000493796 AMHR2Q16671 573 aa8.99□□□□□ -0.97
CD46-217ENST00000493796 TRIM66O15016 1216 aa8.98□□□□□ -0.97
CD46-217ENST00000493796 CLCN1P35523 988 aa8.98□□□□□ -0.97
CD46-217ENST00000493796 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
CD46-217ENST00000493796 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
CD46-217ENST00000493796 TMUB1Q9BVT8 246 aa8.98□□□□□ -0.97
CD46-217ENST00000493796 GPCPD1Q9NPB8 672 aa8.98□□□□□ -0.97
CD46-217ENST00000493796 CFHP08603 1231 aa8.97□□□□□ -0.97
CD46-217ENST00000493796 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
CD46-217ENST00000493796 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
CD46-217ENST00000493796 REPIN1Q9BWE0 567 aaKnown RBP8.96□□□□□ -0.98
CD46-217ENST00000493796 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
CD46-217ENST00000493796 KMT5BQ4FZB7 885 aa8.95□□□□□ -0.98
CD46-217ENST00000493796 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
CD46-217ENST00000493796 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
CD46-217ENST00000493796 CD46P15529 392 aa8.94□□□□□ -0.98
CD46-217ENST00000493796 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
CD46-217ENST00000493796 FAM217BQ9NTX9 383 aaPredicted RBP8.94□□□□□ -0.98
CD46-217ENST00000493796 GCGRP47871 477 aa8.92□□□□□ -0.98
CD46-217ENST00000493796 TJAP1Q5JTD0 557 aa8.92□□□□□ -0.98
CD46-217ENST00000493796 MTRQ99707 1265 aa8.92□□□□□ -0.98
CD46-217ENST00000493796 PCDHB3Q9Y5E6 796 aa8.92□□□□□ -0.98
CD46-217ENST00000493796 PDE4DQ08499 809 aa8.91□□□□□ -0.98
CD46-217ENST00000493796 TPRNQ4KMQ1 711 aa8.91□□□□□ -0.98
CD46-217ENST00000493796 IFFO2Q5TF58 517 aa8.91□□□□□ -0.98
CD46-217ENST00000493796 GIGYF2Q6Y7W6 1299 aaKnown RBP8.91□□□□□ -0.98
CD46-217ENST00000493796 PARP9Q8IXQ6 854 aa8.91□□□□□ -0.98
CD46-217ENST00000493796 KCNC4Q03721 635 aa8.9□□□□□ -0.98
CD46-217ENST00000493796 IL21Q9HBE4 155 aa8.9□□□□□ -0.98
CD46-217ENST00000493796 SSTR3P32745 418 aaPredicted RBP8.89□□□□□ -0.99
CD46-217ENST00000493796 COPS2P61201 443 aa8.89□□□□□ -0.99
CD46-217ENST00000493796 BLOC1S3Q6QNY0 202 aa8.89□□□□□ -0.99
CD46-217ENST00000493796 FUT2Q10981 343 aa8.87□□□□□ -0.99
CD46-217ENST00000493796 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
CD46-217ENST00000493796 KDM4AO75164 1064 aa8.85□□□□□ -0.99
CD46-217ENST00000493796 ZPR1O75312 459 aa8.85□□□□□ -0.99
CD46-217ENST00000493796 ATP6V1AP38606 617 aa8.85□□□□□ -0.99
CD46-217ENST00000493796 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
CD46-217ENST00000493796 NR1I2O75469 434 aa8.84□□□□□ -0.99
CD46-217ENST00000493796 MS4A1P11836 297 aa8.84□□□□□ -0.99
CD46-217ENST00000493796 MORN1Q5T089 497 aa8.84□□□□□ -0.99
CD46-217ENST00000493796 USP46P62068 366 aa8.83□□□□□ -1
CD46-217ENST00000493796 A0A0G2JS52 829 aa8.82□□□□□ -1
CD46-217ENST00000493796 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
CD46-217ENST00000493796 SCUBE3Q8IX30 993 aa8.82□□□□□ -1
CD46-217ENST00000493796 BEGAINQ9BUH8 593 aa8.82□□□□□ -1
CD46-217ENST00000493796 NUTM1Q86Y26 1132 aa8.81□□□□□ -1
CD46-217ENST00000493796 NKX2-3Q8TAU0 364 aa8.81□□□□□ -1
CD46-217ENST00000493796 HOXA2O43364 376 aa8.8□□□□□ -1
CD46-217ENST00000493796 TLL1O43897 1013 aa8.8□□□□□ -1
CD46-217ENST00000493796 SPIRE2Q8WWL2 714 aa8.8□□□□□ -1
CD46-217ENST00000493796 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
CD46-217ENST00000493796 GPBP1L1Q9HC44 474 aaPredicted RBP8.79□□□□□ -1
CD46-217ENST00000493796 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
CD46-217ENST00000493796 HLA-CQ95604 372 aa8.78□□□□□ -1
CD46-217ENST00000493796 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
CD46-217ENST00000493796 ADH1BP00325 375 aa8.77□□□□□ -1.01
CD46-217ENST00000493796 THAP11Q96EK4 314 aa8.77□□□□□ -1.01
CD46-217ENST00000493796 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1.01
CD46-217ENST00000493796 SPSB2Q99619 263 aa8.76□□□□□ -1.01
CD46-217ENST00000493796 TBC1D2Q9BYX2 928 aa8.76□□□□□ -1.01
CD46-217ENST00000493796 FMNL1O95466 1100 aaPredicted RBP8.75□□□□□ -1.01
CD46-217ENST00000493796 GUCA2AQ02747 115 aa8.75□□□□□ -1.01
CD46-217ENST00000493796 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
CD46-217ENST00000493796 Q3C1V9 767 aa8.75□□□□□ -1.01
CD46-217ENST00000493796 PPP1R18Q6NYC8 613 aa8.75□□□□□ -1.01
CD46-217ENST00000493796 BRICD5Q6PL45 260 aa8.75□□□□□ -1.01
CD46-217ENST00000493796 MOXD2PA6NHM9 499 aa8.74□□□□□ -1.01
CD46-217ENST00000493796 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
CD46-217ENST00000493796 FDX1P10109 184 aa8.73□□□□□ -1.01
CD46-217ENST00000493796 NDUFV2P19404 249 aa8.73□□□□□ -1.01
CD46-217ENST00000493796 NEUROD2Q15784 382 aa8.73□□□□□ -1.01
CD46-217ENST00000493796 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
CD46-217ENST00000493796 GGCXP38435 758 aa8.72□□□□□ -1.01
CD46-217ENST00000493796 BRPF1P55201 1214 aaPredicted RBP8.72□□□□□ -1.01
CD46-217ENST00000493796 FAM117AQ9C073 453 aa8.72□□□□□ -1.01
CD46-217ENST00000493796 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
CD46-217ENST00000493796 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
CD46-217ENST00000493796 S1PR4O95977 384 aa8.71□□□□□ -1.02
CD46-217ENST00000493796 GJA5P36382 358 aa8.71□□□□□ -1.02
CD46-217ENST00000493796 FAM160A2Q8N612 972 aaPredicted RBP8.71□□□□□ -1.02
CD46-217ENST00000493796 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms