RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 TRAK2O60296 914 aa10.67□□□□□ -0.7
GBP3-208ENST00000493594 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
GBP3-208ENST00000493594 TBC1D32Q96NH3 1257 aa10.67□□□□□ -0.7
GBP3-208ENST00000493594 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
GBP3-208ENST00000493594 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
GBP3-208ENST00000493594 NEUROD2Q15784 382 aa10.66□□□□□ -0.7
GBP3-208ENST00000493594 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
GBP3-208ENST00000493594 MAGI2Q86UL8 1455 aa10.66□□□□□ -0.7
GBP3-208ENST00000493594 E9PSI1 815 aa10.66□□□□□ -0.7
GBP3-208ENST00000493594 PDE3AQ14432 1141 aa10.65□□□□□ -0.7
GBP3-208ENST00000493594 TNNQ9UQP3 1299 aa10.65□□□□□ -0.7
GBP3-208ENST00000493594 PLB1Q6P1J6 1458 aa10.65□□□□□ -0.7
GBP3-208ENST00000493594 NLRP1Q9C000 1473 aa10.65□□□□□ -0.7
GBP3-208ENST00000493594 PLEKHD1A6NEE1 506 aa10.65□□□□□ -0.71
GBP3-208ENST00000493594 PDZRN3Q9UPQ7 1066 aa10.65□□□□□ -0.71
GBP3-208ENST00000493594 PCDHB15Q9Y5E8 787 aa10.65□□□□□ -0.71
GBP3-208ENST00000493594 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
GBP3-208ENST00000493594 GPRASP1Q5JY77 1395 aa10.64□□□□□ -0.71
GBP3-208ENST00000493594 RRP9O43818 475 aaKnown RBP10.64□□□□□ -0.71
GBP3-208ENST00000493594 BCL2L13Q9BXK5 485 aa10.64□□□□□ -0.71
GBP3-208ENST00000493594 MYH16Q9H6N6 1097 aa10.64□□□□□ -0.71
GBP3-208ENST00000493594 KIAA0556O60303 1618 aa10.63□□□□□ -0.71
GBP3-208ENST00000493594 TARBP1Q13395 1621 aaKnown RBP10.63□□□□□ -0.71
GBP3-208ENST00000493594 CROCC2H7BZ55 1655 aa10.63□□□□□ -0.71
GBP3-208ENST00000493594 ITSN2Q9NZM3 1697 aa10.63□□□□□ -0.71
GBP3-208ENST00000493594 A2MP01023 1474 aa10.63□□□□□ -0.71
GBP3-208ENST00000493594 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
GBP3-208ENST00000493594 MRE11P49959 708 aa10.63□□□□□ -0.71
GBP3-208ENST00000493594 MFAP1P55081 439 aaKnown RBP10.62□□□□□ -0.71
GBP3-208ENST00000493594 GRPEL1Q9HAV7 217 aa10.62□□□□□ -0.71
GBP3-208ENST00000493594 ERBB4Q15303 1308 aa10.62□□□□□ -0.71
GBP3-208ENST00000493594 PBRM1Q86U86 1689 aa10.62□□□□□ -0.71
GBP3-208ENST00000493594 ESPNB1AK53 854 aa10.62□□□□□ -0.71
GBP3-208ENST00000493594 RLBP1P12271 317 aa10.62□□□□□ -0.71
GBP3-208ENST00000493594 PMFBP1Q8TBY8 1022 aa10.62□□□□□ -0.71
GBP3-208ENST00000493594 RRP7AQ9Y3A4 280 aaKnown RBP10.62□□□□□ -0.71
GBP3-208ENST00000493594 PTPRGP23470 1445 aa10.61□□□□□ -0.71
GBP3-208ENST00000493594 CHMP5Q9NZZ3 219 aa10.61□□□□□ -0.71
GBP3-208ENST00000493594 WDR7Q9Y4E6 1490 aa10.61□□□□□ -0.71
GBP3-208ENST00000493594 ADAMTS12P58397 1594 aa10.61□□□□□ -0.71
GBP3-208ENST00000493594 VIRMAQ69YN4 1812 aaKnown RBP10.61□□□□□ -0.71
GBP3-208ENST00000493594 FAM135AQ9P2D6 1515 aa10.61□□□□□ -0.71
GBP3-208ENST00000493594 PRDM15P57071 1507 aaPredicted RBP10.6□□□□□ -0.71
GBP3-208ENST00000493594 PLA2R1Q13018 1463 aa10.6□□□□□ -0.71
GBP3-208ENST00000493594 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
GBP3-208ENST00000493594 TRIM44Q96DX7 344 aaPredicted RBP10.6□□□□□ -0.71
GBP3-208ENST00000493594 C22orf23Q9BZE7 217 aa10.6□□□□□ -0.71
GBP3-208ENST00000493594 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
GBP3-208ENST00000493594 FBLN2P98095 1184 aa10.59□□□□□ -0.71
GBP3-208ENST00000493594 RARSP54136 660 aaKnown RBP10.58□□□□□ -0.72
GBP3-208ENST00000493594 CDC42BPAQ5VT25 1732 aa10.58□□□□□ -0.72
GBP3-208ENST00000493594 RWDD1Q9H446 243 aaPredicted RBP10.58□□□□□ -0.72
GBP3-208ENST00000493594 TNNT2P45379 298 aaPredicted RBP10.57□□□□□ -0.72
GBP3-208ENST00000493594 GAS2L3Q86XJ1 694 aa10.57□□□□□ -0.72
GBP3-208ENST00000493594 ADCY10Q96PN6 1610 aa10.56□□□□□ -0.72
GBP3-208ENST00000493594 SHANK2Q9UPX8 1470 aa10.56□□□□□ -0.72
GBP3-208ENST00000493594 PIK3C2GO75747 1445 aa10.56□□□□□ -0.72
GBP3-208ENST00000493594 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
GBP3-208ENST00000493594 HSCBQ8IWL3 235 aa10.56□□□□□ -0.72
GBP3-208ENST00000493594 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
GBP3-208ENST00000493594 ASXL1Q8IXJ9 1541 aa10.55□□□□□ -0.72
GBP3-208ENST00000493594 DDX11L8A8MPP1 907 aa10.55□□□□□ -0.72
GBP3-208ENST00000493594 FOXD4L1Q9NU39 408 aa10.55□□□□□ -0.72
GBP3-208ENST00000493594 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
GBP3-208ENST00000493594 TNPO1Q92973 898 aaKnown RBP10.54□□□□□ -0.72
GBP3-208ENST00000493594 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
GBP3-208ENST00000493594 CARD14Q9BXL6 1004 aa10.53□□□□□ -0.72
GBP3-208ENST00000493594 ABCC10Q5T3U5 1492 aa10.53□□□□□ -0.72
GBP3-208ENST00000493594 TCP11L2Q8N4U5 519 aa10.53□□□□□ -0.72
GBP3-208ENST00000493594 CHMP7Q8WUX9 453 aaPredicted RBP10.53□□□□□ -0.72
GBP3-208ENST00000493594 MAGI1Q96QZ7 1491 aaPredicted RBP10.52□□□□□ -0.72
GBP3-208ENST00000493594 KIAA1211Q6ZU35 1233 aa10.52□□□□□ -0.73
GBP3-208ENST00000493594 CCDC141Q6ZP82 1450 aa10.52□□□□□ -0.73
GBP3-208ENST00000493594 ABCC2Q92887 1545 aa10.52□□□□□ -0.73
GBP3-208ENST00000493594 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
GBP3-208ENST00000493594 JPH4Q96JJ6 628 aa10.52□□□□□ -0.73
GBP3-208ENST00000493594 LAMC1P11047 1609 aa10.52□□□□□ -0.73
GBP3-208ENST00000493594 RBM10P98175 930 aaKnown RBP10.51□□□□□ -0.73
GBP3-208ENST00000493594 MYO5CQ9NQX4 1742 aa10.51□□□□□ -0.73
GBP3-208ENST00000493594 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
GBP3-208ENST00000493594 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
GBP3-208ENST00000493594 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
GBP3-208ENST00000493594 NGEFQ8N5V2 710 aa10.5□□□□□ -0.73
GBP3-208ENST00000493594 PDCL3Q9H2J4 239 aa10.5□□□□□ -0.73
GBP3-208ENST00000493594 NUP160Q12769 1436 aa10.5□□□□□ -0.73
GBP3-208ENST00000493594 EIF2AK4Q9P2K8 1649 aaKnown RBP10.5□□□□□ -0.73
GBP3-208ENST00000493594 TPM2P07951 284 aa10.5□□□□□ -0.73
GBP3-208ENST00000493594 AAMPQ13685 434 aa10.5□□□□□ -0.73
GBP3-208ENST00000493594 ATP10BO94823 1461 aa10.49□□□□□ -0.73
GBP3-208ENST00000493594 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
GBP3-208ENST00000493594 RUNDC1Q96C34 613 aa10.49□□□□□ -0.73
GBP3-208ENST00000493594 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
GBP3-208ENST00000493594 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
GBP3-208ENST00000493594 DZIP1LQ8IYY4 767 aaKnown RBP10.49□□□□□ -0.73
GBP3-208ENST00000493594 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
GBP3-208ENST00000493594 ZKSCAN2Q63HK3 967 aa10.48□□□□□ -0.73
GBP3-208ENST00000493594 NPC1L1Q9UHC9 1359 aa10.48□□□□□ -0.73
GBP3-208ENST00000493594 DDIT3P35638 169 aa10.48□□□□□ -0.73
GBP3-208ENST00000493594 RSPH4AQ5TD94 716 aa10.48□□□□□ -0.73
GBP3-208ENST00000493594 ITPRIPQ8IWB1 547 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms