RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 CALD1Q05682 793 aaKnown RBP8.66□□□□□ -1.02
EWSR1-220ENST00000493426 PDE3AQ14432 1141 aa8.66□□□□□ -1.02
EWSR1-220ENST00000493426 CAMSAP2Q08AD1 1489 aa8.65□□□□□ -1.02
EWSR1-220ENST00000493426 ANKRD30AQ9BXX3 1397 aa8.65□□□□□ -1.02
EWSR1-220ENST00000493426 ST20-MTHFSA0A0A6YYL1 179 aa8.65□□□□□ -1.02
EWSR1-220ENST00000493426 MCM4P33991 863 aa8.65□□□□□ -1.02
EWSR1-220ENST00000493426 CHMP7Q8WUX9 453 aaPredicted RBP8.65□□□□□ -1.02
EWSR1-220ENST00000493426 LAMC1P11047 1609 aa8.65□□□□□ -1.03
EWSR1-220ENST00000493426 NLRP1Q9C000 1473 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 PTPRGP23470 1445 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 NUP160Q12769 1436 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 CGNL1Q0VF96 1302 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 PLIN1O60240 522 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 GOLGA2Q08379 1002 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 SLFN5Q08AF3 891 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 C20orf194Q5TEA3 1177 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 NAP1L5Q96NT1 182 aaPredicted RBP8.64□□□□□ -1.03
EWSR1-220ENST00000493426 MAP7D2Q96T17 732 aa8.64□□□□□ -1.03
EWSR1-220ENST00000493426 NPC1L1Q9UHC9 1359 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 KIAA0556O60303 1618 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 SHROOM2Q13796 1616 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 ESPNB1AK53 854 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 PTMSP20962 102 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 CHMP5Q9NZZ3 219 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 DISP1Q96F81 1524 aa8.63□□□□□ -1.03
EWSR1-220ENST00000493426 PKD2Q13563 968 aa8.62□□□□□ -1.03
EWSR1-220ENST00000493426 CARMIL2Q6F5E8 1435 aa8.62□□□□□ -1.03
EWSR1-220ENST00000493426 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
EWSR1-220ENST00000493426 MKRN4PQ13434 485 aaPredicted RBP8.61□□□□□ -1.03
EWSR1-220ENST00000493426 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
EWSR1-220ENST00000493426 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
EWSR1-220ENST00000493426 CEP170Q5SW79 1584 aa8.61□□□□□ -1.03
EWSR1-220ENST00000493426 SHANK2Q9UPX8 1470 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 TRAK2O60296 914 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 SKOR2Q2VWA4 1001 aaPredicted RBP8.6□□□□□ -1.03
EWSR1-220ENST00000493426 HS1BP3Q53T59 392 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 SKAP1Q86WV1 359 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 PPP1R9BQ96SB3 815 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 UPF2Q9HAU5 1272 aaKnown RBP8.6□□□□□ -1.03
EWSR1-220ENST00000493426 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
EWSR1-220ENST00000493426 RAPGEF6Q8TEU7 1601 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 PIK3C2GO75747 1445 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 PLEKHH1Q9ULM0 1364 aa8.6□□□□□ -1.03
EWSR1-220ENST00000493426 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 DDIT3P35638 169 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 SPDYE2Q495Y8 402 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 MTERF4Q7Z6M4 381 aaKnown RBP8.59□□□□□ -1.03
EWSR1-220ENST00000493426 PMFBP1Q8TBY8 1022 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 TESK2Q96S53 571 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 GRPEL1Q9HAV7 217 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 ADGBQ8N7X0 1667 aa8.59□□□□□ -1.03
EWSR1-220ENST00000493426 ANKRD50Q9ULJ7 1429 aa8.58□□□□□ -1.04
EWSR1-220ENST00000493426 E9PSI1 815 aa8.58□□□□□ -1.04
EWSR1-220ENST00000493426 POLR3GLQ9BT43 218 aa8.58□□□□□ -1.04
EWSR1-220ENST00000493426 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
EWSR1-220ENST00000493426 ADAMTS8Q9UP79 889 aa8.58□□□□□ -1.04
EWSR1-220ENST00000493426 ABCC2Q92887 1545 aa8.58□□□□□ -1.04
EWSR1-220ENST00000493426 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
EWSR1-220ENST00000493426 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
EWSR1-220ENST00000493426 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 TROQ12816 1431 aaPredicted RBP8.57□□□□□ -1.04
EWSR1-220ENST00000493426 ARHGAP31Q2M1Z3 1444 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 NCOA3Q9Y6Q9 1424 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 OFD1O75665 1012 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 IGHDP01880 384 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 CLEC17AQ6ZS10 378 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 SNX21Q969T3 373 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 ADCY10Q96PN6 1610 aa8.57□□□□□ -1.04
EWSR1-220ENST00000493426 IBTKQ9P2D0 1353 aaPredicted RBP8.57□□□□□ -1.04
EWSR1-220ENST00000493426 PRDM15P57071 1507 aaPredicted RBP8.56□□□□□ -1.04
EWSR1-220ENST00000493426 SEC24BO95487 1268 aa8.56□□□□□ -1.04
EWSR1-220ENST00000493426 RGS3P49796 1198 aa8.56□□□□□ -1.04
EWSR1-220ENST00000493426 CLUAP1Q96AJ1 413 aa8.56□□□□□ -1.04
EWSR1-220ENST00000493426 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
EWSR1-220ENST00000493426 GPATCH8Q9UKJ3 1502 aaKnown RBP8.55□□□□□ -1.04
EWSR1-220ENST00000493426 TRPM1Q7Z4N2 1603 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 PPP2R1AP30153 589 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 CCDC173Q0VFZ6 552 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 CYB5RLQ6IPT4 315 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 SMAP1Q8IYB5 467 aaPredicted RBP8.55□□□□□ -1.04
EWSR1-220ENST00000493426 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 PANK2Q9BZ23 570 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 PANK3Q9H999 370 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 PLXNC1O60486 1568 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 ITSN2Q9NZM3 1697 aa8.55□□□□□ -1.04
EWSR1-220ENST00000493426 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
EWSR1-220ENST00000493426 CDK13Q14004 1512 aaKnown RBP8.54□□□□□ -1.04
EWSR1-220ENST00000493426 ATP10AO60312 1499 aa8.54□□□□□ -1.04
EWSR1-220ENST00000493426 TMF1P82094 1093 aa8.54□□□□□ -1.04
EWSR1-220ENST00000493426 SMC5Q8IY18 1101 aa8.54□□□□□ -1.04
EWSR1-220ENST00000493426 RTEL1-TNFRSF6BF6WH68 1400 aa8.54□□□□□ -1.04
EWSR1-220ENST00000493426 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
EWSR1-220ENST00000493426 NUP155O75694 1391 aa8.53□□□□□ -1.04
EWSR1-220ENST00000493426 KANK1Q14678 1352 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms