RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
LSM2-214ENST00000493387 LMTK3Q96Q04 1460 aa16.66■□□□□ 0.26
LSM2-214ENST00000493387 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
LSM2-214ENST00000493387 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
LSM2-214ENST00000493387 SLIT1O75093 1534 aa16.65■□□□□ 0.26
LSM2-214ENST00000493387 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
LSM2-214ENST00000493387 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
LSM2-214ENST00000493387 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.25
LSM2-214ENST00000493387 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
LSM2-214ENST00000493387 L3MBTL2Q969R5 705 aa16.63■□□□□ 0.25
LSM2-214ENST00000493387 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
LSM2-214ENST00000493387 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
LSM2-214ENST00000493387 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
LSM2-214ENST00000493387 HSPA2P54652 639 aa16.6■□□□□ 0.25
LSM2-214ENST00000493387 SCAF11Q99590 1463 aaKnown RBP16.6■□□□□ 0.25
LSM2-214ENST00000493387 LTKP29376 864 aa16.59■□□□□ 0.25
LSM2-214ENST00000493387 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
LSM2-214ENST00000493387 NEXMIFQ5QGS0 1516 aa16.59■□□□□ 0.25
LSM2-214ENST00000493387 MYOM2P54296 1465 aa16.58■□□□□ 0.24
LSM2-214ENST00000493387 ZEB1P37275 1124 aaPredicted RBP16.57■□□□□ 0.24
LSM2-214ENST00000493387 PLEKHG1Q9ULL1 1385 aa16.56■□□□□ 0.24
LSM2-214ENST00000493387 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
LSM2-214ENST00000493387 PPLO60437 1756 aa16.56■□□□□ 0.24
LSM2-214ENST00000493387 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
LSM2-214ENST00000493387 NCKAP5LQ9HCH0 1330 aa16.55■□□□□ 0.24
LSM2-214ENST00000493387 BCANQ96GW7 911 aa16.55■□□□□ 0.24
LSM2-214ENST00000493387 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
LSM2-214ENST00000493387 MED14O60244 1454 aa16.54■□□□□ 0.24
LSM2-214ENST00000493387 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
LSM2-214ENST00000493387 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
LSM2-214ENST00000493387 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
LSM2-214ENST00000493387 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
LSM2-214ENST00000493387 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
LSM2-214ENST00000493387 PRAG1Q86YV5 1406 aa16.51■□□□□ 0.23
LSM2-214ENST00000493387 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
LSM2-214ENST00000493387 POLR1AO95602 1720 aaPredicted RBP16.5■□□□□ 0.23
LSM2-214ENST00000493387 SETBP1Q9Y6X0 1596 aa16.49■□□□□ 0.23
LSM2-214ENST00000493387 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
LSM2-214ENST00000493387 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.23
LSM2-214ENST00000493387 CFAP70Q5T0N1 1121 aa16.46■□□□□ 0.23
LSM2-214ENST00000493387 DIP2AQ14689 1571 aa16.46■□□□□ 0.23
LSM2-214ENST00000493387 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
LSM2-214ENST00000493387 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
LSM2-214ENST00000493387 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
LSM2-214ENST00000493387 STRCQ7RTU9 1775 aa16.45■□□□□ 0.22
LSM2-214ENST00000493387 ALKQ9UM73 1620 aa16.45■□□□□ 0.22
LSM2-214ENST00000493387 LAMC1P11047 1609 aa16.44■□□□□ 0.22
LSM2-214ENST00000493387 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
LSM2-214ENST00000493387 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
LSM2-214ENST00000493387 ROCK2O75116 1388 aaKnown RBP16.41■□□□□ 0.22
LSM2-214ENST00000493387 RALGAPBQ86X10 1494 aa16.41■□□□□ 0.22
LSM2-214ENST00000493387 METP08581 1390 aa16.39■□□□□ 0.21
LSM2-214ENST00000493387 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
LSM2-214ENST00000493387 KCNA6P17658 529 aa16.39■□□□□ 0.21
LSM2-214ENST00000493387 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
LSM2-214ENST00000493387 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
LSM2-214ENST00000493387 CARD11Q9BXL7 1154 aa16.38■□□□□ 0.21
LSM2-214ENST00000493387 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
LSM2-214ENST00000493387 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
LSM2-214ENST00000493387 ABCC11Q96J66 1382 aa16.37■□□□□ 0.21
LSM2-214ENST00000493387 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
LSM2-214ENST00000493387 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
LSM2-214ENST00000493387 SIRT1Q96EB6 747 aa16.36■□□□□ 0.21
LSM2-214ENST00000493387 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
LSM2-214ENST00000493387 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
LSM2-214ENST00000493387 STK26Q9P289 416 aa16.34■□□□□ 0.21
LSM2-214ENST00000493387 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
LSM2-214ENST00000493387 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
LSM2-214ENST00000493387 ASXL1Q8IXJ9 1541 aa16.33■□□□□ 0.2
LSM2-214ENST00000493387 TECPR2O15040 1411 aa16.32■□□□□ 0.2
LSM2-214ENST00000493387 TRAK1Q9UPV9 953 aa16.32■□□□□ 0.2
LSM2-214ENST00000493387 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
LSM2-214ENST00000493387 DLC1Q96QB1 1528 aa16.3■□□□□ 0.2
LSM2-214ENST00000493387 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
LSM2-214ENST00000493387 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
LSM2-214ENST00000493387 ZNF335Q9H4Z2 1342 aaPredicted RBP16.3■□□□□ 0.2
LSM2-214ENST00000493387 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
LSM2-214ENST00000493387 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
LSM2-214ENST00000493387 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
LSM2-214ENST00000493387 PROSER2Q86WR7 435 aaPredicted RBP16.29■□□□□ 0.2
LSM2-214ENST00000493387 POGKQ9P215 609 aa16.29■□□□□ 0.2
LSM2-214ENST00000493387 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
LSM2-214ENST00000493387 XRN1Q8IZH2 1706 aaKnown RBP16.28■□□□□ 0.2
LSM2-214ENST00000493387 USP47Q96K76 1375 aa16.27■□□□□ 0.2
LSM2-214ENST00000493387 PRAM1Q96QH2 718 aa16.27■□□□□ 0.2
LSM2-214ENST00000493387 CPS1P31327 1500 aa16.27■□□□□ 0.2
LSM2-214ENST00000493387 KNDC1Q76NI1 1749 aa16.27■□□□□ 0.19
LSM2-214ENST00000493387 NCOA3Q9Y6Q9 1424 aa16.27■□□□□ 0.19
LSM2-214ENST00000493387 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
LSM2-214ENST00000493387 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
LSM2-214ENST00000493387 WAPLQ7Z5K2 1190 aa16.24■□□□□ 0.19
LSM2-214ENST00000493387 ST20-MTHFSA0A0A6YYL1 179 aa16.23■□□□□ 0.19
LSM2-214ENST00000493387 TMEM94Q12767 1356 aa16.22■□□□□ 0.19
LSM2-214ENST00000493387 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.19
LSM2-214ENST00000493387 C14orf37Q86TY3 774 aa16.21■□□□□ 0.19
LSM2-214ENST00000493387 ARHGEF28Q8N1W1 1705 aaKnown RBP16.21■□□□□ 0.19
LSM2-214ENST00000493387 SBNO2Q9Y2G9 1366 aa16.21■□□□□ 0.19
LSM2-214ENST00000493387 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.18
LSM2-214ENST00000493387 LRRC7Q96NW7 1537 aa16.2■□□□□ 0.18
LSM2-214ENST00000493387 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms