RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 CCDC141Q6ZP82 1450 aa21.14■□□□□ 0.97
KLF4-204ENST00000493306 MAGI2Q86UL8 1455 aa21.14■□□□□ 0.97
KLF4-204ENST00000493306 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.97
KLF4-204ENST00000493306 BCAR3O75815 825 aa21.13■□□□□ 0.97
KLF4-204ENST00000493306 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
KLF4-204ENST00000493306 PIK3C2GO75747 1445 aa21.12■□□□□ 0.97
KLF4-204ENST00000493306 E9PSI1 815 aa21.12■□□□□ 0.97
KLF4-204ENST00000493306 SEC24BO95487 1268 aa21.12■□□□□ 0.97
KLF4-204ENST00000493306 AMER1Q5JTC6 1135 aaPredicted RBP21.12■□□□□ 0.97
KLF4-204ENST00000493306 PLA2R1Q13018 1463 aa21.11■□□□□ 0.97
KLF4-204ENST00000493306 PDE3AQ14432 1141 aa21.11■□□□□ 0.97
KLF4-204ENST00000493306 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
KLF4-204ENST00000493306 NINLQ9Y2I6 1382 aa21.11■□□□□ 0.97
KLF4-204ENST00000493306 CCDC146Q8IYE0 955 aa21.11■□□□□ 0.97
KLF4-204ENST00000493306 CARMIL2Q6F5E8 1435 aa21.1■□□□□ 0.97
KLF4-204ENST00000493306 GLIPR1L2Q4G1C9 344 aa21.1■□□□□ 0.97
KLF4-204ENST00000493306 CLUAP1Q96AJ1 413 aa21.1■□□□□ 0.97
KLF4-204ENST00000493306 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
KLF4-204ENST00000493306 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
KLF4-204ENST00000493306 CANXP27824 592 aaKnown RBP21.09■□□□□ 0.97
KLF4-204ENST00000493306 CDCA8Q53HL2 280 aa21.09■□□□□ 0.97
KLF4-204ENST00000493306 ANTXR1Q9H6X2 564 aa21.09■□□□□ 0.97
KLF4-204ENST00000493306 SPINK5Q9NQ38 1064 aaPredicted RBP21.09■□□□□ 0.97
KLF4-204ENST00000493306 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
KLF4-204ENST00000493306 APAF1O14727 1248 aa21.08■□□□□ 0.97
KLF4-204ENST00000493306 ASXL1Q8IXJ9 1541 aa21.08■□□□□ 0.96
KLF4-204ENST00000493306 NLRP1Q9C000 1473 aa21.08■□□□□ 0.96
KLF4-204ENST00000493306 GOLGA6L3A6NEY3 463 aa21.07■□□□□ 0.96
KLF4-204ENST00000493306 RNF17Q9BXT8 1623 aaKnown RBP21.07■□□□□ 0.96
KLF4-204ENST00000493306 RSPH4AQ5TD94 716 aa21.06■□□□□ 0.96
KLF4-204ENST00000493306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.96
KLF4-204ENST00000493306 SYNMO15061 1565 aa21.06■□□□□ 0.96
KLF4-204ENST00000493306 UNC13BO14795 1591 aa21.06■□□□□ 0.96
KLF4-204ENST00000493306 NGEFQ8N5V2 710 aa21.06■□□□□ 0.96
KLF4-204ENST00000493306 CENPJQ9HC77 1338 aaPredicted RBP21.05■□□□□ 0.96
KLF4-204ENST00000493306 PLEKHG5O94827 1062 aa21.04■□□□□ 0.96
KLF4-204ENST00000493306 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
KLF4-204ENST00000493306 ABCA8O94911 1581 aa21.04■□□□□ 0.96
KLF4-204ENST00000493306 ARXQ96QS3 562 aa21.04■□□□□ 0.96
KLF4-204ENST00000493306 PODXL2Q9NZ53 605 aa21.04■□□□□ 0.96
KLF4-204ENST00000493306 COG6Q9Y2V7 657 aa21.04■□□□□ 0.96
KLF4-204ENST00000493306 TBC1D32Q96NH3 1257 aa21.03■□□□□ 0.96
KLF4-204ENST00000493306 PMFBP1Q8TBY8 1022 aa21.03■□□□□ 0.96
KLF4-204ENST00000493306 NAP1L5Q96NT1 182 aaPredicted RBP21.03■□□□□ 0.96
KLF4-204ENST00000493306 ATP10BO94823 1461 aa21.02■□□□□ 0.96
KLF4-204ENST00000493306 XRCC6P12956 609 aaKnown RBP eCLIP21.02■□□□□ 0.96
KLF4-204ENST00000493306 TBC1D2Q9BYX2 928 aa21.02■□□□□ 0.96
KLF4-204ENST00000493306 NPC1L1Q9UHC9 1359 aa21.02■□□□□ 0.96
KLF4-204ENST00000493306 ZMYM3Q14202 1370 aa21.02■□□□□ 0.95
KLF4-204ENST00000493306 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
KLF4-204ENST00000493306 PLXNC1O60486 1568 aa21■□□□□ 0.95
KLF4-204ENST00000493306 FSD2A1L4K1 749 aa21■□□□□ 0.95
KLF4-204ENST00000493306 CLCN1P35523 988 aa21■□□□□ 0.95
KLF4-204ENST00000493306 AAMPQ13685 434 aa21■□□□□ 0.95
KLF4-204ENST00000493306 SAMD9LQ8IVG5 1584 aa21■□□□□ 0.95
KLF4-204ENST00000493306 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
KLF4-204ENST00000493306 MCM4P33991 863 aa20.98■□□□□ 0.95
KLF4-204ENST00000493306 ATP10AO60312 1499 aa20.98■□□□□ 0.95
KLF4-204ENST00000493306 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
KLF4-204ENST00000493306 IQGAP1P46940 1657 aa20.98■□□□□ 0.95
KLF4-204ENST00000493306 JPH4Q96JJ6 628 aa20.97■□□□□ 0.95
KLF4-204ENST00000493306 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
KLF4-204ENST00000493306 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
KLF4-204ENST00000493306 PREX2Q70Z35 1606 aa20.94■□□□□ 0.94
KLF4-204ENST00000493306 HSP90AA1P07900 732 aaKnown RBP20.94■□□□□ 0.94
KLF4-204ENST00000493306 PANK2Q9BZ23 570 aa20.94■□□□□ 0.94
KLF4-204ENST00000493306 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
KLF4-204ENST00000493306 CHMP5Q9NZZ3 219 aa20.93■□□□□ 0.94
KLF4-204ENST00000493306 CDC42BPBQ9Y5S2 1711 aa20.93■□□□□ 0.94
KLF4-204ENST00000493306 MAST1Q9Y2H9 1570 aa20.93■□□□□ 0.94
KLF4-204ENST00000493306 SCAF11Q99590 1463 aaKnown RBP20.93■□□□□ 0.94
KLF4-204ENST00000493306 MRE11P49959 708 aa20.93■□□□□ 0.94
KLF4-204ENST00000493306 SPRYD3Q8NCJ5 442 aa20.92■□□□□ 0.94
KLF4-204ENST00000493306 PDZRN3Q9UPQ7 1066 aa20.92■□□□□ 0.94
KLF4-204ENST00000493306 MADDQ8WXG6 1647 aa20.92■□□□□ 0.94
KLF4-204ENST00000493306 HSP90AA2PQ14568 343 aaPredicted RBP20.91■□□□□ 0.94
KLF4-204ENST00000493306 WWC1Q8IX03 1113 aa20.91■□□□□ 0.94
KLF4-204ENST00000493306 MYOM1P52179 1685 aa20.91■□□□□ 0.94
KLF4-204ENST00000493306 TRAK2O60296 914 aa20.91■□□□□ 0.94
KLF4-204ENST00000493306 SYCP2Q9BX26 1530 aa20.91■□□□□ 0.94
KLF4-204ENST00000493306 RRP9O43818 475 aaKnown RBP20.91■□□□□ 0.94
KLF4-204ENST00000493306 RWDD1Q9H446 243 aaPredicted RBP20.91■□□□□ 0.94
KLF4-204ENST00000493306 PCDHB15Q9Y5E8 787 aa20.9■□□□□ 0.94
KLF4-204ENST00000493306 FBLN2P98095 1184 aa20.89■□□□□ 0.93
KLF4-204ENST00000493306 KDM5AP29375 1690 aaKnown RBP20.88■□□□□ 0.93
KLF4-204ENST00000493306 RARSP54136 660 aaKnown RBP20.88■□□□□ 0.93
KLF4-204ENST00000493306 MYH16Q9H6N6 1097 aa20.88■□□□□ 0.93
KLF4-204ENST00000493306 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
KLF4-204ENST00000493306 DDX11L8A8MPP1 907 aa20.87■□□□□ 0.93
KLF4-204ENST00000493306 ISY1Q9ULR0 285 aaKnown RBP20.87■□□□□ 0.93
KLF4-204ENST00000493306 C22orf23Q9BZE7 217 aa20.86■□□□□ 0.93
KLF4-204ENST00000493306 STAC3Q96MF2 364 aa20.85■□□□□ 0.93
KLF4-204ENST00000493306 DUOX2Q9NRD8 1548 aa20.85■□□□□ 0.93
KLF4-204ENST00000493306 VSIG10Q8N0Z9 540 aa20.84■□□□□ 0.93
KLF4-204ENST00000493306 GRPEL1Q9HAV7 217 aa20.84■□□□□ 0.93
KLF4-204ENST00000493306 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.93
KLF4-204ENST00000493306 RLBP1P12271 317 aa20.83■□□□□ 0.93
KLF4-204ENST00000493306 HSCBQ8IWL3 235 aa20.83■□□□□ 0.92
KLF4-204ENST00000493306 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
KLF4-204ENST00000493306 ESPNB1AK53 854 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms