RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 KIF1BO60333 1816 aa25.37■■□□□ 1.65
TSC22D4-205ENST00000493217 INSRP06213 1382 aa25.35■■□□□ 1.65
TSC22D4-205ENST00000493217 EIF3AQ14152 1382 aaKnown RBP25.35■■□□□ 1.65
TSC22D4-205ENST00000493217 FRMPD1Q5SYB0 1578 aa25.34■■□□□ 1.65
TSC22D4-205ENST00000493217 ZMYM4Q5VZL5 1548 aa25.34■■□□□ 1.65
TSC22D4-205ENST00000493217 SYNMO15061 1565 aa25.33■■□□□ 1.65
TSC22D4-205ENST00000493217 B4GALNT3Q6L9W6 998 aa25.33■■□□□ 1.65
TSC22D4-205ENST00000493217 IFT172Q9UG01 1749 aa25.32■■□□□ 1.64
TSC22D4-205ENST00000493217 ADGRF5Q8IZF2 1346 aa25.32■■□□□ 1.64
TSC22D4-205ENST00000493217 CFAP70Q5T0N1 1121 aa25.32■■□□□ 1.64
TSC22D4-205ENST00000493217 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
TSC22D4-205ENST00000493217 ABCA6Q8N139 1617 aa25.31■■□□□ 1.64
TSC22D4-205ENST00000493217 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
TSC22D4-205ENST00000493217 NRXN1Q9ULB1 1477 aa25.3■■□□□ 1.64
TSC22D4-205ENST00000493217 MROH2AA6NES4 1674 aa25.29■■□□□ 1.64
TSC22D4-205ENST00000493217 AMER1Q5JTC6 1135 aaPredicted RBP25.28■■□□□ 1.64
TSC22D4-205ENST00000493217 NPATQ14207 1427 aa25.28■■□□□ 1.64
TSC22D4-205ENST00000493217 BLMP54132 1417 aaPredicted RBP25.28■■□□□ 1.64
TSC22D4-205ENST00000493217 PDE3BQ13370 1112 aa25.28■■□□□ 1.64
TSC22D4-205ENST00000493217 SLC24A1O60721 1099 aa25.27■■□□□ 1.64
TSC22D4-205ENST00000493217 ADGRB3O60242 1522 aa25.27■■□□□ 1.64
TSC22D4-205ENST00000493217 MYOM1P52179 1685 aa25.26■■□□□ 1.63
TSC22D4-205ENST00000493217 NEO1Q92859 1461 aa25.26■■□□□ 1.63
TSC22D4-205ENST00000493217 GGT6Q6P531 493 aa25.25■■□□□ 1.63
TSC22D4-205ENST00000493217 KDM5AP29375 1690 aaKnown RBP25.22■■□□□ 1.63
TSC22D4-205ENST00000493217 ASXL1Q8IXJ9 1541 aa25.22■■□□□ 1.63
TSC22D4-205ENST00000493217 SALL2Q9Y467 1007 aaPredicted RBP25.22■■□□□ 1.63
TSC22D4-205ENST00000493217 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
TSC22D4-205ENST00000493217 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
TSC22D4-205ENST00000493217 ERVK-7P63135 1459 aa25.21■■□□□ 1.63
TSC22D4-205ENST00000493217 NOS1P29475 1434 aa25.21■■□□□ 1.63
TSC22D4-205ENST00000493217 ABCC3O15438 1527 aa25.2■■□□□ 1.62
TSC22D4-205ENST00000493217 RAPGEF3O95398 923 aa25.19■■□□□ 1.62
TSC22D4-205ENST00000493217 MYT1Q01538 1121 aa25.18■■□□□ 1.62
TSC22D4-205ENST00000493217 SETBP1Q9Y6X0 1596 aa25.18■■□□□ 1.62
TSC22D4-205ENST00000493217 SBNO2Q9Y2G9 1366 aa25.18■■□□□ 1.62
TSC22D4-205ENST00000493217 MYO3AQ8NEV4 1616 aa25.18■■□□□ 1.62
TSC22D4-205ENST00000493217 CFAP65Q6ZU64 1925 aaKnown RBP25.17■■□□□ 1.62
TSC22D4-205ENST00000493217 RCAN3Q9UKA8 241 aa25.17■■□□□ 1.62
TSC22D4-205ENST00000493217 ADAMTS8Q9UP79 889 aa25.16■■□□□ 1.62
TSC22D4-205ENST00000493217 PPLO60437 1756 aa25.16■■□□□ 1.62
TSC22D4-205ENST00000493217 PIK3C2GO75747 1445 aa25.16■■□□□ 1.62
TSC22D4-205ENST00000493217 CHGAP10645 457 aaKnown RBP25.16■■□□□ 1.62
TSC22D4-205ENST00000493217 RRP1P56182 461 aaKnown RBP25.16■■□□□ 1.62
TSC22D4-205ENST00000493217 CDCA7LQ96GN5 454 aa25.15■■□□□ 1.62
TSC22D4-205ENST00000493217 RPGRIP1LQ68CZ1 1315 aa25.13■■□□□ 1.61
TSC22D4-205ENST00000493217 CCDC136Q96JN2 1154 aa25.13■■□□□ 1.61
TSC22D4-205ENST00000493217 C14orf93Q9H972 538 aaKnown RBP25.13■■□□□ 1.61
TSC22D4-205ENST00000493217 DIP2CQ9Y2E4 1556 aa25.13■■□□□ 1.61
TSC22D4-205ENST00000493217 CAMSAP1Q5T5Y3 1602 aa25.12■■□□□ 1.61
TSC22D4-205ENST00000493217 CENPJQ9HC77 1338 aaPredicted RBP25.09■■□□□ 1.61
TSC22D4-205ENST00000493217 RICTORQ6R327 1708 aa25.09■■□□□ 1.61
TSC22D4-205ENST00000493217 SIGLEC1Q9BZZ2 1709 aa25.09■■□□□ 1.61
TSC22D4-205ENST00000493217 ADGRB1O14514 1584 aa25.09■■□□□ 1.61
TSC22D4-205ENST00000493217 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.61
TSC22D4-205ENST00000493217 CARD14Q9BXL6 1004 aa25.08■■□□□ 1.61
TSC22D4-205ENST00000493217 FANCIQ9NVI1 1328 aa25.08■■□□□ 1.61
TSC22D4-205ENST00000493217 PIK3C2BO00750 1634 aa25.07■■□□□ 1.6
TSC22D4-205ENST00000493217 ARHGAP31Q2M1Z3 1444 aa25.06■■□□□ 1.6
TSC22D4-205ENST00000493217 TRAK1Q9UPV9 953 aa25.05■■□□□ 1.6
TSC22D4-205ENST00000493217 ANP32EQ9BTT0 268 aa25.03■■□□□ 1.6
TSC22D4-205ENST00000493217 TMEM132EQ6IEE7 984 aa25.01■■□□□ 1.59
TSC22D4-205ENST00000493217 ZC3H13Q5T200 1668 aaKnown RBP25.01■■□□□ 1.59
TSC22D4-205ENST00000493217 PLEKHH1Q9ULM0 1364 aa25.01■■□□□ 1.59
TSC22D4-205ENST00000493217 YEATS2Q9ULM3 1422 aa25.01■■□□□ 1.59
TSC22D4-205ENST00000493217 EXOC6Q8TAG9 804 aa25.01■■□□□ 1.59
TSC22D4-205ENST00000493217 ZNF521Q96K83 1311 aa25■■□□□ 1.59
TSC22D4-205ENST00000493217 GLI2P10070 1586 aa25■■□□□ 1.59
TSC22D4-205ENST00000493217 QRICH2Q9H0J4 1663 aa25■■□□□ 1.59
TSC22D4-205ENST00000493217 NEXMIFQ5QGS0 1516 aa24.99■■□□□ 1.59
TSC22D4-205ENST00000493217 VGFO15240 615 aaPredicted RBP24.99■■□□□ 1.59
TSC22D4-205ENST00000493217 IDI1Q13907 227 aa24.97■■□□□ 1.59
TSC22D4-205ENST00000493217 CYB5RLQ6IPT4 315 aa24.97■■□□□ 1.59
TSC22D4-205ENST00000493217 MSH5O43196 834 aa24.96■■□□□ 1.59
TSC22D4-205ENST00000493217 SLC52A1Q9NWF4 448 aa24.95■■□□□ 1.58
TSC22D4-205ENST00000493217 DUSP27Q5VZP5 1158 aa24.94■■□□□ 1.58
TSC22D4-205ENST00000493217 SLC12A5Q9H2X9 1139 aa24.93■■□□□ 1.58
TSC22D4-205ENST00000493217 NUTM2DQ5VT03 806 aaPredicted RBP24.92■■□□□ 1.58
TSC22D4-205ENST00000493217 ZFYVE9O95405 1425 aa24.92■■□□□ 1.58
TSC22D4-205ENST00000493217 GOLGA2Q08379 1002 aa24.92■■□□□ 1.58
TSC22D4-205ENST00000493217 NSD3Q9BZ95 1437 aa24.92■■□□□ 1.58
TSC22D4-205ENST00000493217 PUS7Q96PZ0 661 aaKnown RBP24.91■■□□□ 1.58
TSC22D4-205ENST00000493217 PLIN1O60240 522 aa24.9■■□□□ 1.58
TSC22D4-205ENST00000493217 POLR3AO14802 1390 aaPredicted RBP24.9■■□□□ 1.58
TSC22D4-205ENST00000493217 ARHGEF28Q8N1W1 1705 aaKnown RBP24.89■■□□□ 1.58
TSC22D4-205ENST00000493217 CCDC146Q8IYE0 955 aa24.88■■□□□ 1.57
TSC22D4-205ENST00000493217 PREX1Q8TCU6 1659 aa24.87■■□□□ 1.57
TSC22D4-205ENST00000493217 SLFN5Q08AF3 891 aa24.87■■□□□ 1.57
TSC22D4-205ENST00000493217 TRMT2AQ8IZ69 625 aaKnown RBP24.86■■□□□ 1.57
TSC22D4-205ENST00000493217 EVC2Q86UK5 1308 aa24.86■■□□□ 1.57
TSC22D4-205ENST00000493217 APAF1O14727 1248 aa24.85■■□□□ 1.57
TSC22D4-205ENST00000493217 TULP4Q9NRJ4 1543 aa24.85■■□□□ 1.57
TSC22D4-205ENST00000493217 USP32Q8NFA0 1604 aa24.85■■□□□ 1.57
TSC22D4-205ENST00000493217 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
TSC22D4-205ENST00000493217 FAM69CQ0P6D2 419 aa24.84■■□□□ 1.57
TSC22D4-205ENST00000493217 MORC1Q86VD1 984 aa24.84■■□□□ 1.57
TSC22D4-205ENST00000493217 NGEFQ8N5V2 710 aa24.83■■□□□ 1.57
TSC22D4-205ENST00000493217 DIP2BQ9P265 1576 aa24.83■■□□□ 1.56
TSC22D4-205ENST00000493217 MYO5BQ9ULV0 1848 aa24.82■■□□□ 1.56
TSC22D4-205ENST00000493217 CRBNQ96SW2 442 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms