RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 E9PCH4 1651 aa20.37■□□□□ 0.85
IRF1-210ENST00000493208 HFM1A2PYH4 1435 aa20.36■□□□□ 0.85
IRF1-210ENST00000493208 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
IRF1-210ENST00000493208 NAIPQ13075 1403 aa20.36■□□□□ 0.85
IRF1-210ENST00000493208 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
IRF1-210ENST00000493208 TMEM131LA2VDJ0 1609 aa20.33■□□□□ 0.84
IRF1-210ENST00000493208 ZFYVE9O95405 1425 aa20.33■□□□□ 0.84
IRF1-210ENST00000493208 NKTRP30414 1462 aaKnown RBP20.32■□□□□ 0.84
IRF1-210ENST00000493208 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
IRF1-210ENST00000493208 PROSER2Q86WR7 435 aaPredicted RBP20.32■□□□□ 0.84
IRF1-210ENST00000493208 DISP3Q9P2K9 1392 aa20.32■□□□□ 0.84
IRF1-210ENST00000493208 TBX22Q9Y458 520 aa20.31■□□□□ 0.84
IRF1-210ENST00000493208 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
IRF1-210ENST00000493208 PIK3R4Q99570 1358 aa20.29■□□□□ 0.84
IRF1-210ENST00000493208 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
IRF1-210ENST00000493208 SPHKAPQ2M3C7 1700 aa20.27■□□□□ 0.84
IRF1-210ENST00000493208 MSH6P52701 1360 aa20.27■□□□□ 0.84
IRF1-210ENST00000493208 TMEM94Q12767 1356 aa20.26■□□□□ 0.83
IRF1-210ENST00000493208 TRPM2O94759 1503 aa20.24■□□□□ 0.83
IRF1-210ENST00000493208 HSPA1LP34931 641 aa20.24■□□□□ 0.83
IRF1-210ENST00000493208 C14orf37Q86TY3 774 aa20.24■□□□□ 0.83
IRF1-210ENST00000493208 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
IRF1-210ENST00000493208 NWD1Q149M9 1564 aa20.24■□□□□ 0.83
IRF1-210ENST00000493208 STRCP1A6NGW2 1772 aa20.23■□□□□ 0.83
IRF1-210ENST00000493208 MYO5BQ9ULV0 1848 aa20.2■□□□□ 0.82
IRF1-210ENST00000493208 VGFO15240 615 aaPredicted RBP20.2■□□□□ 0.82
IRF1-210ENST00000493208 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
IRF1-210ENST00000493208 RPGRIP1LQ68CZ1 1315 aa20.19■□□□□ 0.82
IRF1-210ENST00000493208 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
IRF1-210ENST00000493208 FAM135BQ49AJ0 1406 aa20.18■□□□□ 0.82
IRF1-210ENST00000493208 ADAMTS13Q76LX8 1427 aa20.16■□□□□ 0.82
IRF1-210ENST00000493208 ATF3P18847 181 aa20.15■□□□□ 0.82
IRF1-210ENST00000493208 CADPS2Q86UW7 1296 aa20.15■□□□□ 0.82
IRF1-210ENST00000493208 CCDC144AA2RUR9 1427 aa20.15■□□□□ 0.82
IRF1-210ENST00000493208 KIF1BO60333 1816 aa20.15■□□□□ 0.82
IRF1-210ENST00000493208 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
IRF1-210ENST00000493208 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
IRF1-210ENST00000493208 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
IRF1-210ENST00000493208 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
IRF1-210ENST00000493208 SETBP1Q9Y6X0 1596 aa20.13■□□□□ 0.81
IRF1-210ENST00000493208 C19orf44Q9H6X5 657 aa20.13■□□□□ 0.81
IRF1-210ENST00000493208 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
IRF1-210ENST00000493208 SETD5Q9C0A6 1442 aa20.11■□□□□ 0.81
IRF1-210ENST00000493208 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
IRF1-210ENST00000493208 ALKQ9UM73 1620 aa20.1■□□□□ 0.81
IRF1-210ENST00000493208 XIRP1Q702N8 1843 aaKnown RBP20.09■□□□□ 0.81
IRF1-210ENST00000493208 NEXMIFQ5QGS0 1516 aa20.08■□□□□ 0.81
IRF1-210ENST00000493208 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.81
IRF1-210ENST00000493208 DCCP43146 1447 aa20.06■□□□□ 0.8
IRF1-210ENST00000493208 MED1Q15648 1581 aaPredicted RBP20.04■□□□□ 0.8
IRF1-210ENST00000493208 ANKRD30BQ9BXX2 1392 aa20.04■□□□□ 0.8
IRF1-210ENST00000493208 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
IRF1-210ENST00000493208 METP08581 1390 aa20■□□□□ 0.79
IRF1-210ENST00000493208 FOXD1Q16676 465 aa20■□□□□ 0.79
IRF1-210ENST00000493208 NRXN3Q9Y4C0 1643 aa20■□□□□ 0.79
IRF1-210ENST00000493208 HRCP23327 699 aa19.99■□□□□ 0.79
IRF1-210ENST00000493208 RGL3Q3MIN7 710 aa19.99■□□□□ 0.79
IRF1-210ENST00000493208 PTPRUQ92729 1446 aa19.99■□□□□ 0.79
IRF1-210ENST00000493208 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
IRF1-210ENST00000493208 RAB3GAP2Q9H2M9 1393 aa19.98■□□□□ 0.79
IRF1-210ENST00000493208 SOCS7O14512 581 aa19.98■□□□□ 0.79
IRF1-210ENST00000493208 PTCH1Q13635 1447 aa19.98■□□□□ 0.79
IRF1-210ENST00000493208 JCADQ9P266 1359 aa19.97■□□□□ 0.79
IRF1-210ENST00000493208 ADGRL3Q9HAR2 1447 aa19.96■□□□□ 0.79
IRF1-210ENST00000493208 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
IRF1-210ENST00000493208 ILDR2Q71H61 639 aa19.94■□□□□ 0.78
IRF1-210ENST00000493208 PPLO60437 1756 aa19.93■□□□□ 0.78
IRF1-210ENST00000493208 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
IRF1-210ENST00000493208 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
IRF1-210ENST00000493208 SPATA31A6Q5VVP1 1343 aa19.92■□□□□ 0.78
IRF1-210ENST00000493208 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
IRF1-210ENST00000493208 STAC3Q96MF2 364 aa19.91■□□□□ 0.78
IRF1-210ENST00000493208 AHDC1Q5TGY3 1603 aaPredicted RBP19.89■□□□□ 0.77
IRF1-210ENST00000493208 BRINP3Q76B58 766 aa19.89■□□□□ 0.77
IRF1-210ENST00000493208 MEX3CQ5U5Q3 659 aaKnown RBP19.88■□□□□ 0.77
IRF1-210ENST00000493208 ADGRF5Q8IZF2 1346 aa19.87■□□□□ 0.77
IRF1-210ENST00000493208 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
IRF1-210ENST00000493208 MST1RQ04912 1400 aa19.86■□□□□ 0.77
IRF1-210ENST00000493208 PIK3C2GO75747 1445 aa19.85■□□□□ 0.77
IRF1-210ENST00000493208 ROBO2Q9HCK4 1378 aa19.85■□□□□ 0.77
IRF1-210ENST00000493208 ASXL1Q8IXJ9 1541 aa19.85■□□□□ 0.77
IRF1-210ENST00000493208 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
IRF1-210ENST00000493208 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
IRF1-210ENST00000493208 MYOM2P54296 1465 aa19.84■□□□□ 0.77
IRF1-210ENST00000493208 STK26Q9P289 416 aa19.83■□□□□ 0.77
IRF1-210ENST00000493208 ABCC11Q96J66 1382 aa19.83■□□□□ 0.76
IRF1-210ENST00000493208 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
IRF1-210ENST00000493208 LAMC1P11047 1609 aa19.82■□□□□ 0.76
IRF1-210ENST00000493208 COL16A1Q07092 1604 aaPredicted RBP19.82■□□□□ 0.76
IRF1-210ENST00000493208 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
IRF1-210ENST00000493208 C14orf93Q9H972 538 aaKnown RBP19.81■□□□□ 0.76
IRF1-210ENST00000493208 TECPR2O15040 1411 aa19.81■□□□□ 0.76
IRF1-210ENST00000493208 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
IRF1-210ENST00000493208 IFT172Q9UG01 1749 aa19.8■□□□□ 0.76
IRF1-210ENST00000493208 ZNF772Q68DY9 489 aaPredicted RBP19.8■□□□□ 0.76
IRF1-210ENST00000493208 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
IRF1-210ENST00000493208 YTHDC2Q9H6S0 1430 aaKnown RBP19.78■□□□□ 0.76
IRF1-210ENST00000493208 CDC42BPGQ6DT37 1551 aa19.77■□□□□ 0.76
IRF1-210ENST00000493208 SHPRHQ149N8 1683 aa19.77■□□□□ 0.76
IRF1-210ENST00000493208 NPHP3Q7Z494 1330 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms