RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 PROSER2Q86WR7 435 aaPredicted RBP17.68■□□□□ 0.42
PDCD4-210ENST00000492932 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDCD4-210ENST00000492932 NUP155O75694 1391 aa17.67■□□□□ 0.42
PDCD4-210ENST00000492932 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
PDCD4-210ENST00000492932 ALKQ9UM73 1620 aa17.66■□□□□ 0.42
PDCD4-210ENST00000492932 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
PDCD4-210ENST00000492932 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
PDCD4-210ENST00000492932 IQGAP3Q86VI3 1631 aa17.65■□□□□ 0.42
PDCD4-210ENST00000492932 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
PDCD4-210ENST00000492932 PLEKHG1Q9ULL1 1385 aa17.65■□□□□ 0.42
PDCD4-210ENST00000492932 E9PCH4 1651 aa17.64■□□□□ 0.41
PDCD4-210ENST00000492932 NKTRP30414 1462 aaKnown RBP17.63■□□□□ 0.41
PDCD4-210ENST00000492932 TMEM131LA2VDJ0 1609 aa17.63■□□□□ 0.41
PDCD4-210ENST00000492932 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
PDCD4-210ENST00000492932 MSH6P52701 1360 aa17.61■□□□□ 0.41
PDCD4-210ENST00000492932 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
PDCD4-210ENST00000492932 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
PDCD4-210ENST00000492932 NWD1Q149M9 1564 aa17.6■□□□□ 0.41
PDCD4-210ENST00000492932 TBX22Q9Y458 520 aa17.59■□□□□ 0.41
PDCD4-210ENST00000492932 FAM135BQ49AJ0 1406 aa17.58■□□□□ 0.41
PDCD4-210ENST00000492932 NUTM2DQ5VT03 806 aaPredicted RBP17.58■□□□□ 0.4
PDCD4-210ENST00000492932 RBM33Q96EV2 1170 aaKnown RBP17.58■□□□□ 0.4
PDCD4-210ENST00000492932 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
PDCD4-210ENST00000492932 DIP2AQ14689 1571 aa17.55■□□□□ 0.4
PDCD4-210ENST00000492932 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
PDCD4-210ENST00000492932 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
PDCD4-210ENST00000492932 CHD2O14647 1828 aaKnown RBP17.54■□□□□ 0.4
PDCD4-210ENST00000492932 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
PDCD4-210ENST00000492932 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
PDCD4-210ENST00000492932 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
PDCD4-210ENST00000492932 NCOA3Q9Y6Q9 1424 aa17.52■□□□□ 0.4
PDCD4-210ENST00000492932 SPHKAPQ2M3C7 1700 aa17.52■□□□□ 0.39
PDCD4-210ENST00000492932 TRPM2O94759 1503 aa17.52■□□□□ 0.39
PDCD4-210ENST00000492932 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
PDCD4-210ENST00000492932 ADAMTS13Q76LX8 1427 aa17.49■□□□□ 0.39
PDCD4-210ENST00000492932 ATF3P18847 181 aa17.49■□□□□ 0.39
PDCD4-210ENST00000492932 CADPS2Q86UW7 1296 aa17.48■□□□□ 0.39
PDCD4-210ENST00000492932 NAIPQ13075 1403 aa17.47■□□□□ 0.39
PDCD4-210ENST00000492932 C19orf44Q9H6X5 657 aa17.47■□□□□ 0.39
PDCD4-210ENST00000492932 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
PDCD4-210ENST00000492932 HFM1A2PYH4 1435 aa17.44■□□□□ 0.38
PDCD4-210ENST00000492932 PHLPP1O60346 1717 aa17.44■□□□□ 0.38
PDCD4-210ENST00000492932 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
PDCD4-210ENST00000492932 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
PDCD4-210ENST00000492932 JCADQ9P266 1359 aa17.41■□□□□ 0.38
PDCD4-210ENST00000492932 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
PDCD4-210ENST00000492932 KIF1BO60333 1816 aa17.41■□□□□ 0.38
PDCD4-210ENST00000492932 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.4■□□□□ 0.38
PDCD4-210ENST00000492932 PTPRUQ92729 1446 aa17.39■□□□□ 0.38
PDCD4-210ENST00000492932 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
PDCD4-210ENST00000492932 DCCP43146 1447 aa17.38■□□□□ 0.37
PDCD4-210ENST00000492932 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
PDCD4-210ENST00000492932 NRXN3Q9Y4C0 1643 aa17.37■□□□□ 0.37
PDCD4-210ENST00000492932 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
PDCD4-210ENST00000492932 RPGRIP1LQ68CZ1 1315 aa17.36■□□□□ 0.37
PDCD4-210ENST00000492932 METP08581 1390 aa17.36■□□□□ 0.37
PDCD4-210ENST00000492932 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
PDCD4-210ENST00000492932 RGS17Q9UGC6 210 aaPredicted RBP17.35■□□□□ 0.37
PDCD4-210ENST00000492932 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
PDCD4-210ENST00000492932 COL16A1Q07092 1604 aaPredicted RBP17.33■□□□□ 0.37
PDCD4-210ENST00000492932 AHDC1Q5TGY3 1603 aaPredicted RBP17.32■□□□□ 0.36
PDCD4-210ENST00000492932 BRINP3Q76B58 766 aa17.32■□□□□ 0.36
PDCD4-210ENST00000492932 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
PDCD4-210ENST00000492932 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
PDCD4-210ENST00000492932 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
PDCD4-210ENST00000492932 POTEAQ6S8J7 498 aa17.29■□□□□ 0.36
PDCD4-210ENST00000492932 ASXL1Q8IXJ9 1541 aa17.28■□□□□ 0.36
PDCD4-210ENST00000492932 MST1RQ04912 1400 aa17.28■□□□□ 0.36
PDCD4-210ENST00000492932 FOXD1Q16676 465 aa17.27■□□□□ 0.36
PDCD4-210ENST00000492932 ZNF772Q68DY9 489 aaPredicted RBP17.27■□□□□ 0.36
PDCD4-210ENST00000492932 PTCH1Q13635 1447 aa17.27■□□□□ 0.35
PDCD4-210ENST00000492932 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
PDCD4-210ENST00000492932 LRRC59Q96AG4 307 aaKnown RBP17.26■□□□□ 0.35
PDCD4-210ENST00000492932 MPHOSPH9Q99550 1183 aa17.26■□□□□ 0.35
PDCD4-210ENST00000492932 NUTM2BA6NNL0 878 aaPredicted RBP17.25■□□□□ 0.35
PDCD4-210ENST00000492932 NUTM2EB1AL46 878 aaPredicted RBP17.25■□□□□ 0.35
PDCD4-210ENST00000492932 NUTM2AQ8IVF1 878 aaPredicted RBP17.25■□□□□ 0.35
PDCD4-210ENST00000492932 PPLO60437 1756 aa17.25■□□□□ 0.35
PDCD4-210ENST00000492932 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
PDCD4-210ENST00000492932 RGL3Q3MIN7 710 aa17.24■□□□□ 0.35
PDCD4-210ENST00000492932 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
PDCD4-210ENST00000492932 LRP6O75581 1613 aa17.22■□□□□ 0.35
PDCD4-210ENST00000492932 ROBO2Q9HCK4 1378 aa17.22■□□□□ 0.35
PDCD4-210ENST00000492932 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
PDCD4-210ENST00000492932 ANKRD30BQ9BXX2 1392 aa17.21■□□□□ 0.35
PDCD4-210ENST00000492932 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
PDCD4-210ENST00000492932 C1orf167Q5SNV9 1468 aa17.2■□□□□ 0.34
PDCD4-210ENST00000492932 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
PDCD4-210ENST00000492932 ADGRF5Q8IZF2 1346 aa17.19■□□□□ 0.34
PDCD4-210ENST00000492932 DDX17Q92841 729 aaKnown RBP17.17■□□□□ 0.34
PDCD4-210ENST00000492932 STK26Q9P289 416 aa17.17■□□□□ 0.34
PDCD4-210ENST00000492932 SPATA31E1Q6ZUB1 1445 aa17.16■□□□□ 0.34
PDCD4-210ENST00000492932 RXRBP28702 533 aa17.16■□□□□ 0.34
PDCD4-210ENST00000492932 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
PDCD4-210ENST00000492932 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
PDCD4-210ENST00000492932 ESCO1Q5FWF5 840 aa17.14■□□□□ 0.33
PDCD4-210ENST00000492932 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
PDCD4-210ENST00000492932 AFF2P51816 1311 aa17.14■□□□□ 0.33
PDCD4-210ENST00000492932 LRPPRCP42704 1394 aaKnown RBP17.13■□□□□ 0.33
PDCD4-210ENST00000492932 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms