RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 TMEM131LA2VDJ0 1609 aa11.42□□□□□ -0.58
FDPS-218ENST00000492887 KIAA1210Q9ULL0 1709 aa11.42□□□□□ -0.58
FDPS-218ENST00000492887 MYO3AQ8NEV4 1616 aa11.42□□□□□ -0.58
FDPS-218ENST00000492887 ZMYM3Q14202 1370 aa11.41□□□□□ -0.58
FDPS-218ENST00000492887 UBR1Q8IWV7 1749 aa11.41□□□□□ -0.58
FDPS-218ENST00000492887 SPATA31E1Q6ZUB1 1445 aa11.41□□□□□ -0.58
FDPS-218ENST00000492887 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
FDPS-218ENST00000492887 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
FDPS-218ENST00000492887 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
FDPS-218ENST00000492887 RALGAPBQ86X10 1494 aa11.39□□□□□ -0.59
FDPS-218ENST00000492887 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
FDPS-218ENST00000492887 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
FDPS-218ENST00000492887 TNRQ92752 1358 aa11.39□□□□□ -0.59
FDPS-218ENST00000492887 LAMC1P11047 1609 aa11.38□□□□□ -0.59
FDPS-218ENST00000492887 NEXMIFQ5QGS0 1516 aa11.38□□□□□ -0.59
FDPS-218ENST00000492887 MYOM2P54296 1465 aa11.38□□□□□ -0.59
FDPS-218ENST00000492887 UHRF1BP1Q6BDS2 1440 aa11.37□□□□□ -0.59
FDPS-218ENST00000492887 PRAG1Q86YV5 1406 aa11.37□□□□□ -0.59
FDPS-218ENST00000492887 NBPF8Q3BBV2 869 aa11.37□□□□□ -0.59
FDPS-218ENST00000492887 SLC52A1Q9NWF4 448 aa11.37□□□□□ -0.59
FDPS-218ENST00000492887 ROCK2O75116 1388 aaKnown RBP11.37□□□□□ -0.59
FDPS-218ENST00000492887 IQGAP1P46940 1657 aa11.36□□□□□ -0.59
FDPS-218ENST00000492887 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
FDPS-218ENST00000492887 IDI1Q13907 227 aa11.35□□□□□ -0.59
FDPS-218ENST00000492887 ZNF142P52746 1687 aaPredicted RBP11.35□□□□□ -0.59
FDPS-218ENST00000492887 NLRP1Q9C000 1473 aa11.33□□□□□ -0.6
FDPS-218ENST00000492887 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
FDPS-218ENST00000492887 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
FDPS-218ENST00000492887 HIRIP3Q9BW71 556 aaPredicted RBP11.33□□□□□ -0.6
FDPS-218ENST00000492887 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
FDPS-218ENST00000492887 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
FDPS-218ENST00000492887 RPGRIP1LQ68CZ1 1315 aa11.32□□□□□ -0.6
FDPS-218ENST00000492887 A2ML1A8K2U0 1454 aa11.32□□□□□ -0.6
FDPS-218ENST00000492887 USP47Q96K76 1375 aa11.31□□□□□ -0.6
FDPS-218ENST00000492887 STAC3Q96MF2 364 aa11.31□□□□□ -0.6
FDPS-218ENST00000492887 RIMS2Q9UQ26 1411 aa11.3□□□□□ -0.6
FDPS-218ENST00000492887 HSPA5P11021 654 aaKnown RBP11.3□□□□□ -0.6
FDPS-218ENST00000492887 ADGRF5Q8IZF2 1346 aa11.3□□□□□ -0.6
FDPS-218ENST00000492887 QRICH2Q9H0J4 1663 aa11.3□□□□□ -0.6
FDPS-218ENST00000492887 ARHGEF28Q8N1W1 1705 aaKnown RBP11.29□□□□□ -0.6
FDPS-218ENST00000492887 SETBP1Q9Y6X0 1596 aa11.29□□□□□ -0.6
FDPS-218ENST00000492887 BCANQ96GW7 911 aa11.29□□□□□ -0.6
FDPS-218ENST00000492887 PTPRMP28827 1452 aa11.28□□□□□ -0.6
FDPS-218ENST00000492887 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
FDPS-218ENST00000492887 SETD1AO15047 1707 aaKnown RBP11.28□□□□□ -0.6
FDPS-218ENST00000492887 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
FDPS-218ENST00000492887 NRXN1Q9ULB1 1477 aa11.27□□□□□ -0.6
FDPS-218ENST00000492887 POLR3GLQ9BT43 218 aa11.27□□□□□ -0.61
FDPS-218ENST00000492887 EIF3AQ14152 1382 aaKnown RBP11.27□□□□□ -0.61
FDPS-218ENST00000492887 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
FDPS-218ENST00000492887 ALKQ9UM73 1620 aa11.25□□□□□ -0.61
FDPS-218ENST00000492887 NRXN3Q9Y4C0 1643 aa11.25□□□□□ -0.61
FDPS-218ENST00000492887 NBPF1Q3BBV0 1214 aa11.25□□□□□ -0.61
FDPS-218ENST00000492887 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
FDPS-218ENST00000492887 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
FDPS-218ENST00000492887 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
FDPS-218ENST00000492887 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
FDPS-218ENST00000492887 KNDC1Q76NI1 1749 aa11.24□□□□□ -0.61
FDPS-218ENST00000492887 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
FDPS-218ENST00000492887 ZFYVE9O95405 1425 aa11.24□□□□□ -0.61
FDPS-218ENST00000492887 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
FDPS-218ENST00000492887 SLIT1O75093 1534 aa11.22□□□□□ -0.61
FDPS-218ENST00000492887 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
FDPS-218ENST00000492887 ADGRB1O14514 1584 aa11.21□□□□□ -0.61
FDPS-218ENST00000492887 ASXL1Q8IXJ9 1541 aa11.21□□□□□ -0.61
FDPS-218ENST00000492887 ST20-MTHFSA0A0A6YYL1 179 aa11.21□□□□□ -0.61
FDPS-218ENST00000492887 THEMISQ8N1K5 641 aaPredicted RBP11.21□□□□□ -0.61
FDPS-218ENST00000492887 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
FDPS-218ENST00000492887 C14orf93Q9H972 538 aaKnown RBP11.2□□□□□ -0.62
FDPS-218ENST00000492887 DIP2AQ14689 1571 aa11.2□□□□□ -0.62
FDPS-218ENST00000492887 TMEM132EQ6IEE7 984 aa11.19□□□□□ -0.62
FDPS-218ENST00000492887 TRAK1Q9UPV9 953 aa11.19□□□□□ -0.62
FDPS-218ENST00000492887 ARHGAP23Q9P227 1491 aa11.19□□□□□ -0.62
FDPS-218ENST00000492887 DDX10Q13206 875 aaKnown RBP11.18□□□□□ -0.62
FDPS-218ENST00000492887 STK26Q9P289 416 aa11.18□□□□□ -0.62
FDPS-218ENST00000492887 CCDC7Q96M83 1385 aa11.17□□□□□ -0.62
FDPS-218ENST00000492887 PLEKHG1Q9ULL1 1385 aa11.17□□□□□ -0.62
FDPS-218ENST00000492887 YTHDC2Q9H6S0 1430 aaKnown RBP11.17□□□□□ -0.62
FDPS-218ENST00000492887 CHD2O14647 1828 aaKnown RBP11.16□□□□□ -0.62
FDPS-218ENST00000492887 TMF1P82094 1093 aa11.16□□□□□ -0.62
FDPS-218ENST00000492887 MYOM1P52179 1685 aa11.16□□□□□ -0.62
FDPS-218ENST00000492887 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
FDPS-218ENST00000492887 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
FDPS-218ENST00000492887 WASHC2AQ641Q2 1341 aa11.14□□□□□ -0.63
FDPS-218ENST00000492887 SAFB2Q14151 953 aaKnown RBP eCLIP11.14□□□□□ -0.63
FDPS-218ENST00000492887 POGKQ9P215 609 aa11.14□□□□□ -0.63
FDPS-218ENST00000492887 CPS1P31327 1500 aa11.14□□□□□ -0.63
FDPS-218ENST00000492887 LTKP29376 864 aa11.13□□□□□ -0.63
FDPS-218ENST00000492887 ANKLE2Q86XL3 938 aa11.13□□□□□ -0.63
FDPS-218ENST00000492887 DLC1Q96QB1 1528 aa11.13□□□□□ -0.63
FDPS-218ENST00000492887 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
FDPS-218ENST00000492887 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
FDPS-218ENST00000492887 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
FDPS-218ENST00000492887 SLC26A8Q96RN1 970 aa11.12□□□□□ -0.63
FDPS-218ENST00000492887 LRPPRCP42704 1394 aaKnown RBP11.12□□□□□ -0.63
FDPS-218ENST00000492887 DISP3Q9P2K9 1392 aa11.12□□□□□ -0.63
FDPS-218ENST00000492887 XRN1Q8IZH2 1706 aaKnown RBP11.12□□□□□ -0.63
FDPS-218ENST00000492887 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
FDPS-218ENST00000492887 C11orf95C9JLR9 678 aaPredicted RBP11.11□□□□□ -0.63
FDPS-218ENST00000492887 NPHP4O75161 1426 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms