RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 PRM3Q9NNZ6 103 aa8.62□□□□□ -1.03
SND1-216ENST00000492840 RBM25P49756 843 aaKnown RBP8.61□□□□□ -1.03
SND1-216ENST00000492840 KCNA1Q09470 495 aa8.61□□□□□ -1.03
SND1-216ENST00000492840 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
SND1-216ENST00000492840 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
SND1-216ENST00000492840 ZNF428Q96B54 188 aa8.61□□□□□ -1.03
SND1-216ENST00000492840 EIF4G1Q04637 1599 aaKnown RBP8.61□□□□□ -1.03
SND1-216ENST00000492840 USTQ9Y2C2 406 aa8.6□□□□□ -1.03
SND1-216ENST00000492840 CD46P15529 392 aa8.59□□□□□ -1.03
SND1-216ENST00000492840 AP1G2O75843 785 aa8.58□□□□□ -1.04
SND1-216ENST00000492840 BRD1O95696 1058 aa8.58□□□□□ -1.04
SND1-216ENST00000492840 CLCN6P51797 869 aa8.58□□□□□ -1.04
SND1-216ENST00000492840 QPCTQ16769 361 aa8.58□□□□□ -1.04
SND1-216ENST00000492840 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
SND1-216ENST00000492840 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
SND1-216ENST00000492840 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
SND1-216ENST00000492840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.57□□□□□ -1.04
SND1-216ENST00000492840 LILRB3O75022 631 aa8.57□□□□□ -1.04
SND1-216ENST00000492840 USP17L8P0C7I0 530 aa8.57□□□□□ -1.04
SND1-216ENST00000492840 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
SND1-216ENST00000492840 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
SND1-216ENST00000492840 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.56□□□□□ -1.04
SND1-216ENST00000492840 KDM4FA0A1W2PPD8 638 aa8.56□□□□□ -1.04
SND1-216ENST00000492840 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
SND1-216ENST00000492840 FOSBP53539 338 aa8.56□□□□□ -1.04
SND1-216ENST00000492840 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
SND1-216ENST00000492840 ZNF710Q8N1W2 664 aa8.56□□□□□ -1.04
SND1-216ENST00000492840 COLQQ9Y215 455 aaPredicted RBP8.56□□□□□ -1.04
SND1-216ENST00000492840 GJA5P36382 358 aa8.55□□□□□ -1.04
SND1-216ENST00000492840 PRSS12P56730 875 aa8.55□□□□□ -1.04
SND1-216ENST00000492840 SRPK2P78362 688 aaKnown RBP8.55□□□□□ -1.04
SND1-216ENST00000492840 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
SND1-216ENST00000492840 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
SND1-216ENST00000492840 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
SND1-216ENST00000492840 NDUFB9Q9Y6M9 179 aa8.55□□□□□ -1.04
SND1-216ENST00000492840 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
SND1-216ENST00000492840 SEC24BO95487 1268 aa8.54□□□□□ -1.04
SND1-216ENST00000492840 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
SND1-216ENST00000492840 GJD4Q96KN9 370 aaPredicted RBP8.54□□□□□ -1.04
SND1-216ENST00000492840 RCCD1A6NED2 376 aa8.53□□□□□ -1.04
SND1-216ENST00000492840 NDUFV2P19404 249 aa8.53□□□□□ -1.04
SND1-216ENST00000492840 RFX1P22670 979 aa8.53□□□□□ -1.04
SND1-216ENST00000492840 C3orf67Q6ZVT6 689 aa8.53□□□□□ -1.04
SND1-216ENST00000492840 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
SND1-216ENST00000492840 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
SND1-216ENST00000492840 IGSF3O75054 1194 aa8.52□□□□□ -1.05
SND1-216ENST00000492840 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
SND1-216ENST00000492840 ZDHHC16Q969W1 377 aa8.52□□□□□ -1.05
SND1-216ENST00000492840 GPR37L1O60883 481 aa8.51□□□□□ -1.05
SND1-216ENST00000492840 WASHC4Q2M389 1173 aa8.51□□□□□ -1.05
SND1-216ENST00000492840 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
SND1-216ENST00000492840 EYA1Q99502 592 aa8.51□□□□□ -1.05
SND1-216ENST00000492840 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
SND1-216ENST00000492840 CARNS1A5YM72 827 aa8.5□□□□□ -1.05
SND1-216ENST00000492840 DDX11L8A8MPP1 907 aa8.5□□□□□ -1.05
SND1-216ENST00000492840 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
SND1-216ENST00000492840 ZNF454Q8N9F8 522 aa8.5□□□□□ -1.05
SND1-216ENST00000492840 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
SND1-216ENST00000492840 PPP1R12CQ9BZL4 782 aa8.5□□□□□ -1.05
SND1-216ENST00000492840 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
SND1-216ENST00000492840 NUTM2BA6NNL0 878 aaPredicted RBP8.49□□□□□ -1.05
SND1-216ENST00000492840 NUTM2EB1AL46 878 aaPredicted RBP8.49□□□□□ -1.05
SND1-216ENST00000492840 E9PSI1 815 aa8.49□□□□□ -1.05
SND1-216ENST00000492840 NUTM2DQ5VT03 806 aaPredicted RBP8.49□□□□□ -1.05
SND1-216ENST00000492840 NUTM2AQ8IVF1 878 aaPredicted RBP8.49□□□□□ -1.05
SND1-216ENST00000492840 IVNS1ABPQ9Y6Y0 642 aa8.48□□□□□ -1.05
SND1-216ENST00000492840 POTEFA5A3E0 1075 aa8.47□□□□□ -1.05
SND1-216ENST00000492840 CCDC27Q2M243 656 aa8.47□□□□□ -1.05
SND1-216ENST00000492840 SND1Q7KZF4 910 aaKnown RBP eCLIP8.47□□□□□ -1.052e-8■□□□□ 8.3
SND1-216ENST00000492840 PELP1Q8IZL8 1130 aaKnown RBP8.47□□□□□ -1.05
SND1-216ENST00000492840 TRIM34Q9BYJ4 488 aa8.47□□□□□ -1.05
SND1-216ENST00000492840 ZBTB3Q9H5J0 574 aa8.47□□□□□ -1.05
SND1-216ENST00000492840 HMX1Q9NP08 348 aaPredicted RBP8.47□□□□□ -1.05
SND1-216ENST00000492840 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
SND1-216ENST00000492840 PALM3A6NDB9 673 aaPredicted RBP8.46□□□□□ -1.06
SND1-216ENST00000492840 VAC14Q08AM6 782 aa8.46□□□□□ -1.06
SND1-216ENST00000492840 ALG2Q9H553 416 aa8.46□□□□□ -1.06
SND1-216ENST00000492840 DNAJB2P25686 324 aa8.45□□□□□ -1.06
SND1-216ENST00000492840 EVX2Q03828 476 aa8.45□□□□□ -1.06
SND1-216ENST00000492840 TMEM88BA6NKF7 163 aa8.44□□□□□ -1.06
SND1-216ENST00000492840 UCN2Q96RP3 112 aa8.44□□□□□ -1.06
SND1-216ENST00000492840 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
SND1-216ENST00000492840 VRTNQ9H8Y1 702 aa8.44□□□□□ -1.06
SND1-216ENST00000492840 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
SND1-216ENST00000492840 KDM4AO75164 1064 aa8.43□□□□□ -1.06
SND1-216ENST00000492840 ATG7O95352 703 aa8.43□□□□□ -1.06
SND1-216ENST00000492840 LMOD1P29536 600 aaPredicted RBP8.43□□□□□ -1.06
SND1-216ENST00000492840 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
SND1-216ENST00000492840 ERCC6Q03468 1493 aa8.43□□□□□ -1.06
SND1-216ENST00000492840 HOXA2O43364 376 aa8.42□□□□□ -1.06
SND1-216ENST00000492840 COL9A1P20849 921 aa8.42□□□□□ -1.06
SND1-216ENST00000492840 CTDSPL2Q05D32 466 aa8.42□□□□□ -1.06
SND1-216ENST00000492840 NUDT18Q6ZVK8 323 aa8.42□□□□□ -1.06
SND1-216ENST00000492840 RDH13Q8NBN7 331 aa8.42□□□□□ -1.06
SND1-216ENST00000492840 SLC39A7Q92504 469 aa8.42□□□□□ -1.06
SND1-216ENST00000492840 NBPF26B4DH59 902 aa8.41□□□□□ -1.06
SND1-216ENST00000492840 FDX1P10109 184 aa8.41□□□□□ -1.06
SND1-216ENST00000492840 USP46P62068 366 aa8.41□□□□□ -1.06
SND1-216ENST00000492840 TFIP11Q9UBB9 837 aaKnown RBP8.41□□□□□ -1.06
SND1-216ENST00000492840 HAX1O00165 279 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms