RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 TXNDC2Q86VQ3 553 aa23.24■■□□□ 1.31
COPS3-210ENST00000492672 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
COPS3-210ENST00000492672 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
COPS3-210ENST00000492672 ANKLE2Q86XL3 938 aa23.22■■□□□ 1.31
COPS3-210ENST00000492672 PPLO60437 1756 aa23.2■■□□□ 1.3
COPS3-210ENST00000492672 NEXMIFQ5QGS0 1516 aa23.2■■□□□ 1.3
COPS3-210ENST00000492672 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
COPS3-210ENST00000492672 IFT172Q9UG01 1749 aa23.18■■□□□ 1.3
COPS3-210ENST00000492672 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
COPS3-210ENST00000492672 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
COPS3-210ENST00000492672 IQGAP1P46940 1657 aa23.14■■□□□ 1.29
COPS3-210ENST00000492672 MED14O60244 1454 aa23.13■■□□□ 1.29
COPS3-210ENST00000492672 NPHP4O75161 1426 aaPredicted RBP23.13■■□□□ 1.29
COPS3-210ENST00000492672 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
COPS3-210ENST00000492672 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
COPS3-210ENST00000492672 SLC26A8Q96RN1 970 aa23.1■■□□□ 1.29
COPS3-210ENST00000492672 RPGRIP1LQ68CZ1 1315 aa23.09■■□□□ 1.29
COPS3-210ENST00000492672 ADGRF5Q8IZF2 1346 aa23.09■■□□□ 1.29
COPS3-210ENST00000492672 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
COPS3-210ENST00000492672 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.09■■□□□ 1.29
COPS3-210ENST00000492672 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
COPS3-210ENST00000492672 HDGFP51858 240 aaKnown RBP23.08■■□□□ 1.29
COPS3-210ENST00000492672 BCANQ96GW7 911 aa23.08■■□□□ 1.29
COPS3-210ENST00000492672 PLEKHG1Q9ULL1 1385 aa23.07■■□□□ 1.28
COPS3-210ENST00000492672 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
COPS3-210ENST00000492672 L3MBTL2Q969R5 705 aa23.06■■□□□ 1.28
COPS3-210ENST00000492672 DMRT2Q9Y5R5 561 aa23.05■■□□□ 1.28
COPS3-210ENST00000492672 VGFO15240 615 aaPredicted RBP23.04■■□□□ 1.28
COPS3-210ENST00000492672 ADAMTS13Q76LX8 1427 aa23.04■■□□□ 1.28
COPS3-210ENST00000492672 STRCP1A6NGW2 1772 aa23.04■■□□□ 1.28
COPS3-210ENST00000492672 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
COPS3-210ENST00000492672 SETBP1Q9Y6X0 1596 aa23■■□□□ 1.27
COPS3-210ENST00000492672 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
COPS3-210ENST00000492672 MYOM2P54296 1465 aa22.98■■□□□ 1.27
COPS3-210ENST00000492672 NRXN1Q9ULB1 1477 aa22.98■■□□□ 1.27
COPS3-210ENST00000492672 ALKQ9UM73 1620 aa22.97■■□□□ 1.27
COPS3-210ENST00000492672 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
COPS3-210ENST00000492672 CHD2O14647 1828 aaKnown RBP22.96■■□□□ 1.27
COPS3-210ENST00000492672 PIK3C2GO75747 1445 aa22.95■■□□□ 1.26
COPS3-210ENST00000492672 METP08581 1390 aa22.95■■□□□ 1.26
COPS3-210ENST00000492672 CFAP70Q5T0N1 1121 aa22.95■■□□□ 1.26
COPS3-210ENST00000492672 CLSPNQ9HAW4 1339 aa22.94■■□□□ 1.26
COPS3-210ENST00000492672 PTPRUQ92729 1446 aa22.93■■□□□ 1.26
COPS3-210ENST00000492672 TMEM132EQ6IEE7 984 aa22.93■■□□□ 1.26
COPS3-210ENST00000492672 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
COPS3-210ENST00000492672 LTBP4Q8N2S1 1624 aa22.92■■□□□ 1.26
COPS3-210ENST00000492672 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
COPS3-210ENST00000492672 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
COPS3-210ENST00000492672 ASXL1Q8IXJ9 1541 aa22.91■■□□□ 1.26
COPS3-210ENST00000492672 DIP2AQ14689 1571 aa22.9■■□□□ 1.26
COPS3-210ENST00000492672 PRAG1Q86YV5 1406 aa22.89■■□□□ 1.25
COPS3-210ENST00000492672 KCNA6P17658 529 aa22.87■■□□□ 1.25
COPS3-210ENST00000492672 RBM33Q96EV2 1170 aaKnown RBP22.87■■□□□ 1.25
COPS3-210ENST00000492672 NBPF1Q3BBV0 1214 aa22.86■■□□□ 1.25
COPS3-210ENST00000492672 AMOTL2Q9Y2J4 779 aa22.86■■□□□ 1.25
COPS3-210ENST00000492672 XIRP1Q702N8 1843 aaKnown RBP22.86■■□□□ 1.25
COPS3-210ENST00000492672 STAC3Q96MF2 364 aa22.85■■□□□ 1.25
COPS3-210ENST00000492672 NWD1Q149M9 1564 aa22.84■■□□□ 1.25
COPS3-210ENST00000492672 XRN1Q8IZH2 1706 aaKnown RBP22.84■■□□□ 1.25
COPS3-210ENST00000492672 STK26Q9P289 416 aa22.83■■□□□ 1.25
COPS3-210ENST00000492672 LAMC1P11047 1609 aa22.82■■□□□ 1.24
COPS3-210ENST00000492672 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
COPS3-210ENST00000492672 ADGRB1O14514 1584 aa22.81■■□□□ 1.24
COPS3-210ENST00000492672 KIAA1210Q9ULL0 1709 aa22.81■■□□□ 1.24
COPS3-210ENST00000492672 PIK3R4Q99570 1358 aa22.8■■□□□ 1.24
COPS3-210ENST00000492672 LRRC7Q96NW7 1537 aa22.8■■□□□ 1.24
COPS3-210ENST00000492672 PROSER2Q86WR7 435 aaPredicted RBP22.78■■□□□ 1.24
COPS3-210ENST00000492672 YTHDC2Q9H6S0 1430 aaKnown RBP22.78■■□□□ 1.24
COPS3-210ENST00000492672 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
COPS3-210ENST00000492672 CPS1P31327 1500 aa22.76■■□□□ 1.23
COPS3-210ENST00000492672 LRPPRCP42704 1394 aaKnown RBP22.76■■□□□ 1.23
COPS3-210ENST00000492672 CERKQ8TCT0 537 aa22.75■■□□□ 1.23
COPS3-210ENST00000492672 WAPLQ7Z5K2 1190 aa22.74■■□□□ 1.23
COPS3-210ENST00000492672 TIMELESSQ9UNS1 1208 aa22.74■■□□□ 1.23
COPS3-210ENST00000492672 TRAK1Q9UPV9 953 aa22.74■■□□□ 1.23
COPS3-210ENST00000492672 TMEM94Q12767 1356 aa22.74■■□□□ 1.23
COPS3-210ENST00000492672 KNDC1Q76NI1 1749 aa22.74■■□□□ 1.23
COPS3-210ENST00000492672 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
COPS3-210ENST00000492672 PLEKHH1Q9ULM0 1364 aa22.73■■□□□ 1.23
COPS3-210ENST00000492672 ABCC11Q96J66 1382 aa22.72■■□□□ 1.23
COPS3-210ENST00000492672 ARHGEF28Q8N1W1 1705 aaKnown RBP22.7■■□□□ 1.22
COPS3-210ENST00000492672 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.69■■□□□ 1.22
COPS3-210ENST00000492672 TECPR2O15040 1411 aa22.69■■□□□ 1.22
COPS3-210ENST00000492672 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
COPS3-210ENST00000492672 RALGAPBQ86X10 1494 aa22.67■■□□□ 1.22
COPS3-210ENST00000492672 ROCK2O75116 1388 aaKnown RBP22.67■■□□□ 1.22
COPS3-210ENST00000492672 NALCNQ8IZF0 1738 aa22.67■■□□□ 1.22
COPS3-210ENST00000492672 PTCH1Q13635 1447 aa22.66■■□□□ 1.22
COPS3-210ENST00000492672 PRAM1Q96QH2 718 aa22.66■■□□□ 1.22
COPS3-210ENST00000492672 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
COPS3-210ENST00000492672 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
COPS3-210ENST00000492672 C14orf37Q86TY3 774 aa22.63■■□□□ 1.21
COPS3-210ENST00000492672 CARD11Q9BXL7 1154 aa22.62■■□□□ 1.21
COPS3-210ENST00000492672 SIRT1Q96EB6 747 aa22.61■■□□□ 1.21
COPS3-210ENST00000492672 FAM135BQ49AJ0 1406 aa22.6■■□□□ 1.21
COPS3-210ENST00000492672 POGKQ9P215 609 aa22.6■■□□□ 1.21
COPS3-210ENST00000492672 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
COPS3-210ENST00000492672 MINK1Q8N4C8 1332 aaPredicted RBP22.57■■□□□ 1.2
COPS3-210ENST00000492672 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
COPS3-210ENST00000492672 C19orf44Q9H6X5 657 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms