RNA–Protein interactions for RNA: ENST00000492588.1

C9orf16-204, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 1,570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-204ENST00000492588 CHGAP10645 457 aaKnown RBP25.14■■□□□ 1.62
C9orf16-204ENST00000492588 DCAF11Q8TEB1 546 aa25.14■■□□□ 1.62
C9orf16-204ENST00000492588 RPGRIP1LQ68CZ1 1315 aa25.13■■□□□ 1.61
C9orf16-204ENST00000492588 SLIT1O75093 1534 aa25.12■■□□□ 1.61
C9orf16-204ENST00000492588 TRPM1Q7Z4N2 1603 aa25.12■■□□□ 1.61
C9orf16-204ENST00000492588 ARHGAP23Q9P227 1491 aa25.11■■□□□ 1.61
C9orf16-204ENST00000492588 NBPF8Q3BBV2 869 aa25.1■■□□□ 1.61
C9orf16-204ENST00000492588 STAC3Q96MF2 364 aa25.1■■□□□ 1.61
C9orf16-204ENST00000492588 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
C9orf16-204ENST00000492588 TMEM2Q9UHN6 1383 aa25.09■■□□□ 1.61
C9orf16-204ENST00000492588 RIMS2Q9UQ26 1411 aa25.08■■□□□ 1.61
C9orf16-204ENST00000492588 KIAA1210Q9ULL0 1709 aa25.08■■□□□ 1.6
C9orf16-204ENST00000492588 PIK3C2GO75747 1445 aa25.08■■□□□ 1.6
C9orf16-204ENST00000492588 RALGAPBQ86X10 1494 aa25.07■■□□□ 1.6
C9orf16-204ENST00000492588 STAG3Q9UJ98 1225 aa25.07■■□□□ 1.6
C9orf16-204ENST00000492588 KDM2AQ9Y2K7 1162 aa25.06■■□□□ 1.6
C9orf16-204ENST00000492588 ADGRF5Q8IZF2 1346 aa25.05■■□□□ 1.6
C9orf16-204ENST00000492588 NRXN3Q9Y4C0 1643 aa25.03■■□□□ 1.6
C9orf16-204ENST00000492588 LAMC1P11047 1609 aa25.02■■□□□ 1.6
C9orf16-204ENST00000492588 SETD1AO15047 1707 aaKnown RBP25.01■■□□□ 1.59
C9orf16-204ENST00000492588 SETBP1Q9Y6X0 1596 aa24.99■■□□□ 1.59
C9orf16-204ENST00000492588 IQGAP1P46940 1657 aa24.99■■□□□ 1.59
C9orf16-204ENST00000492588 THEMISQ8N1K5 641 aaPredicted RBP24.99■■□□□ 1.59
C9orf16-204ENST00000492588 LMTK3Q96Q04 1460 aa24.99■■□□□ 1.59
C9orf16-204ENST00000492588 VGFO15240 615 aaPredicted RBP24.98■■□□□ 1.59
C9orf16-204ENST00000492588 GPRASP1Q5JY77 1395 aa24.97■■□□□ 1.59
C9orf16-204ENST00000492588 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
C9orf16-204ENST00000492588 DIEXFQ68CQ4 756 aaKnown RBP24.97■■□□□ 1.59
C9orf16-204ENST00000492588 POLR1AO95602 1720 aaPredicted RBP24.96■■□□□ 1.59
C9orf16-204ENST00000492588 SCAF11Q99590 1463 aaKnown RBP24.95■■□□□ 1.59
C9orf16-204ENST00000492588 ADGRB1O14514 1584 aa24.95■■□□□ 1.58
C9orf16-204ENST00000492588 ASXL1Q8IXJ9 1541 aa24.95■■□□□ 1.58
C9orf16-204ENST00000492588 LTKP29376 864 aa24.94■■□□□ 1.58
C9orf16-204ENST00000492588 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
C9orf16-204ENST00000492588 ALKQ9UM73 1620 aa24.93■■□□□ 1.58
C9orf16-204ENST00000492588 PLEKHG1Q9ULL1 1385 aa24.92■■□□□ 1.58
C9orf16-204ENST00000492588 ROCK2O75116 1388 aaKnown RBP24.9■■□□□ 1.58
C9orf16-204ENST00000492588 NBPF1Q3BBV0 1214 aa24.89■■□□□ 1.58
C9orf16-204ENST00000492588 C14orf93Q9H972 538 aaKnown RBP24.89■■□□□ 1.58
C9orf16-204ENST00000492588 ADAMTS13Q76LX8 1427 aa24.89■■□□□ 1.57
C9orf16-204ENST00000492588 HDGFP51858 240 aaKnown RBP24.88■■□□□ 1.57
C9orf16-204ENST00000492588 MED14O60244 1454 aa24.88■■□□□ 1.57
C9orf16-204ENST00000492588 CFAP70Q5T0N1 1121 aa24.88■■□□□ 1.57
C9orf16-204ENST00000492588 TXNDC2Q86VQ3 553 aa24.87■■□□□ 1.57
C9orf16-204ENST00000492588 DIP2AQ14689 1571 aa24.86■■□□□ 1.57
C9orf16-204ENST00000492588 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
C9orf16-204ENST00000492588 STRCQ7RTU9 1775 aa24.82■■□□□ 1.56
C9orf16-204ENST00000492588 ANKLE2Q86XL3 938 aa24.8■■□□□ 1.56
C9orf16-204ENST00000492588 CARD11Q9BXL7 1154 aa24.8■■□□□ 1.56
C9orf16-204ENST00000492588 USP47Q96K76 1375 aa24.8■■□□□ 1.56
C9orf16-204ENST00000492588 ARHGEF28Q8N1W1 1705 aaKnown RBP24.8■■□□□ 1.56
C9orf16-204ENST00000492588 KNDC1Q76NI1 1749 aa24.79■■□□□ 1.56
C9orf16-204ENST00000492588 NPHP4O75161 1426 aaPredicted RBP24.78■■□□□ 1.56
C9orf16-204ENST00000492588 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
C9orf16-204ENST00000492588 METP08581 1390 aa24.76■■□□□ 1.55
C9orf16-204ENST00000492588 HSPA2P54652 639 aa24.76■■□□□ 1.55
C9orf16-204ENST00000492588 YTHDC2Q9H6S0 1430 aaKnown RBP24.74■■□□□ 1.55
C9orf16-204ENST00000492588 TMEM132EQ6IEE7 984 aa24.74■■□□□ 1.55
C9orf16-204ENST00000492588 XRN1Q8IZH2 1706 aaKnown RBP24.73■■□□□ 1.55
C9orf16-204ENST00000492588 NCKAP5LQ9HCH0 1330 aa24.72■■□□□ 1.55
C9orf16-204ENST00000492588 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
C9orf16-204ENST00000492588 CPS1P31327 1500 aa24.72■■□□□ 1.55
C9orf16-204ENST00000492588 DLC1Q96QB1 1528 aa24.72■■□□□ 1.55
C9orf16-204ENST00000492588 HSPA5P11021 654 aaKnown RBP24.71■■□□□ 1.55
C9orf16-204ENST00000492588 TECPR2O15040 1411 aa24.71■■□□□ 1.55
C9orf16-204ENST00000492588 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
C9orf16-204ENST00000492588 LRPPRCP42704 1394 aaKnown RBP24.7■■□□□ 1.55
C9orf16-204ENST00000492588 CHD2O14647 1828 aaKnown RBP24.7■■□□□ 1.55
C9orf16-204ENST00000492588 PTPRUQ92729 1446 aa24.7■■□□□ 1.54
C9orf16-204ENST00000492588 SLC26A8Q96RN1 970 aa24.69■■□□□ 1.54
C9orf16-204ENST00000492588 PIK3R4Q99570 1358 aa24.68■■□□□ 1.54
C9orf16-204ENST00000492588 QRICH2Q9H0J4 1663 aa24.67■■□□□ 1.54
C9orf16-204ENST00000492588 EIF3AQ14152 1382 aaKnown RBP24.67■■□□□ 1.54
C9orf16-204ENST00000492588 ABCC11Q96J66 1382 aa24.67■■□□□ 1.54
C9orf16-204ENST00000492588 NWD1Q149M9 1564 aa24.66■■□□□ 1.54
C9orf16-204ENST00000492588 BCANQ96GW7 911 aa24.66■■□□□ 1.54
C9orf16-204ENST00000492588 HIRIP3Q9BW71 556 aaPredicted RBP24.64■■□□□ 1.54
C9orf16-204ENST00000492588 ST20-MTHFSA0A0A6YYL1 179 aa24.63■■□□□ 1.53
C9orf16-204ENST00000492588 PTCH1Q13635 1447 aa24.63■■□□□ 1.53
C9orf16-204ENST00000492588 TRAK1Q9UPV9 953 aa24.63■■□□□ 1.53
C9orf16-204ENST00000492588 SBNO2Q9Y2G9 1366 aa24.62■■□□□ 1.53
C9orf16-204ENST00000492588 TESK2Q96S53 571 aa24.62■■□□□ 1.53
C9orf16-204ENST00000492588 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
C9orf16-204ENST00000492588 STRCP1A6NGW2 1772 aa24.59■■□□□ 1.53
C9orf16-204ENST00000492588 STK26Q9P289 416 aa24.59■■□□□ 1.53
C9orf16-204ENST00000492588 CENPJQ9HC77 1338 aaPredicted RBP24.58■■□□□ 1.52
C9orf16-204ENST00000492588 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.52
C9orf16-204ENST00000492588 PLEKHH1Q9ULM0 1364 aa24.55■■□□□ 1.52
C9orf16-204ENST00000492588 SIRT1Q96EB6 747 aa24.55■■□□□ 1.52
C9orf16-204ENST00000492588 AMOTL2Q9Y2J4 779 aa24.54■■□□□ 1.52
C9orf16-204ENST00000492588 TULP4Q9NRJ4 1543 aa24.53■■□□□ 1.52
C9orf16-204ENST00000492588 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.53■■□□□ 1.52
C9orf16-204ENST00000492588 DISP3Q9P2K9 1392 aa24.52■■□□□ 1.52
C9orf16-204ENST00000492588 ADGRB2O60241 1585 aa24.52■■□□□ 1.52
C9orf16-204ENST00000492588 C11orf95C9JLR9 678 aaPredicted RBP24.52■■□□□ 1.52
C9orf16-204ENST00000492588 PRAM1Q96QH2 718 aa24.52■■□□□ 1.52
C9orf16-204ENST00000492588 NKTRP30414 1462 aaKnown RBP24.52■■□□□ 1.52
C9orf16-204ENST00000492588 KCNA6P17658 529 aa24.5■■□□□ 1.51
C9orf16-204ENST00000492588 WASHC2AQ641Q2 1341 aa24.49■■□□□ 1.51
C9orf16-204ENST00000492588 WAPLQ7Z5K2 1190 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms