RNA–Protein interactions for RNA: ENST00000492422.1

CCDC30-210, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-210ENST00000492422 PDE4DQ08499 809 aa11.27□□□□□ -0.61
CCDC30-210ENST00000492422 NLRP7Q8WX94 980 aa11.27□□□□□ -0.61
CCDC30-210ENST00000492422 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
CCDC30-210ENST00000492422 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
CCDC30-210ENST00000492422 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
CCDC30-210ENST00000492422 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
CCDC30-210ENST00000492422 SOWAHBA6NEL2 793 aa11.25□□□□□ -0.61
CCDC30-210ENST00000492422 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
CCDC30-210ENST00000492422 TTLL12Q14166 644 aaPredicted RBP11.24□□□□□ -0.61
CCDC30-210ENST00000492422 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
CCDC30-210ENST00000492422 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
CCDC30-210ENST00000492422 BRPF1P55201 1214 aaPredicted RBP11.23□□□□□ -0.61
CCDC30-210ENST00000492422 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
CCDC30-210ENST00000492422 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
CCDC30-210ENST00000492422 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
CCDC30-210ENST00000492422 REPIN1Q9BWE0 567 aaKnown RBP11.22□□□□□ -0.61
CCDC30-210ENST00000492422 BCAMP50895 628 aa11.21□□□□□ -0.61
CCDC30-210ENST00000492422 SULF1Q8IWU6 871 aa11.21□□□□□ -0.61
CCDC30-210ENST00000492422 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.61
CCDC30-210ENST00000492422 MMRN1Q13201 1228 aa11.2□□□□□ -0.62
CCDC30-210ENST00000492422 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
CCDC30-210ENST00000492422 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
CCDC30-210ENST00000492422 GIGYF2Q6Y7W6 1299 aaKnown RBP11.19□□□□□ -0.62
CCDC30-210ENST00000492422 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
CCDC30-210ENST00000492422 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
CCDC30-210ENST00000492422 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
CCDC30-210ENST00000492422 RNF40O75150 1001 aa11.18□□□□□ -0.62
CCDC30-210ENST00000492422 PPP4CP60510 307 aa11.18□□□□□ -0.62
CCDC30-210ENST00000492422 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
CCDC30-210ENST00000492422 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
CCDC30-210ENST00000492422 SLC10A3P09131 477 aa11.15□□□□□ -0.62
CCDC30-210ENST00000492422 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
CCDC30-210ENST00000492422 RDH13Q8NBN7 331 aa11.15□□□□□ -0.62
CCDC30-210ENST00000492422 KDM4CQ9H3R0 1056 aa11.15□□□□□ -0.62
CCDC30-210ENST00000492422 CD46P15529 392 aa11.14□□□□□ -0.63
CCDC30-210ENST00000492422 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
CCDC30-210ENST00000492422 PTPN5P54829 565 aa11.13□□□□□ -0.63
CCDC30-210ENST00000492422 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
CCDC30-210ENST00000492422 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
CCDC30-210ENST00000492422 HCSTQ9UBK5 93 aa11.13□□□□□ -0.63
CCDC30-210ENST00000492422 MS4A1P11836 297 aa11.12□□□□□ -0.63
CCDC30-210ENST00000492422 GCGRP47871 477 aa11.1□□□□□ -0.63
CCDC30-210ENST00000492422 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
CCDC30-210ENST00000492422 CFHP08603 1231 aa11.09□□□□□ -0.63
CCDC30-210ENST00000492422 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
CCDC30-210ENST00000492422 BEGAINQ9BUH8 593 aa11.08□□□□□ -0.64
CCDC30-210ENST00000492422 ACTN4O43707 911 aaKnown RBP11.06□□□□□ -0.64
CCDC30-210ENST00000492422 APLP1P51693 650 aa11.06□□□□□ -0.64
CCDC30-210ENST00000492422 DDRGK1Q96HY6 314 aa11.05□□□□□ -0.64
CCDC30-210ENST00000492422 KDM4AO75164 1064 aa11.04□□□□□ -0.64
CCDC30-210ENST00000492422 FAM117AQ9C073 453 aa11.04□□□□□ -0.64
CCDC30-210ENST00000492422 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
CCDC30-210ENST00000492422 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
CCDC30-210ENST00000492422 USP46P62068 366 aa11.02□□□□□ -0.65
CCDC30-210ENST00000492422 DIXDC1Q155Q3 683 aa11.02□□□□□ -0.65
CCDC30-210ENST00000492422 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
CCDC30-210ENST00000492422 SPIRE2Q8WWL2 714 aa11.01□□□□□ -0.65
CCDC30-210ENST00000492422 ATP6V1AP38606 617 aa11□□□□□ -0.65
CCDC30-210ENST00000492422 FUT2Q10981 343 aa11□□□□□ -0.65
CCDC30-210ENST00000492422 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
CCDC30-210ENST00000492422 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
CCDC30-210ENST00000492422 PLEKHG3A1L390 1219 aa10.98□□□□□ -0.65
CCDC30-210ENST00000492422 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
CCDC30-210ENST00000492422 RSPH6AQ9H0K4 717 aa10.98□□□□□ -0.65
CCDC30-210ENST00000492422 HOXA2O43364 376 aa10.96□□□□□ -0.65
CCDC30-210ENST00000492422 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
CCDC30-210ENST00000492422 MORN1Q5T089 497 aa10.95□□□□□ -0.66
CCDC30-210ENST00000492422 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
CCDC30-210ENST00000492422 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
CCDC30-210ENST00000492422 MTRQ99707 1265 aa10.94□□□□□ -0.66
CCDC30-210ENST00000492422 NR1I2O75469 434 aa10.93□□□□□ -0.66
CCDC30-210ENST00000492422 GJA5P36382 358 aa10.93□□□□□ -0.66
CCDC30-210ENST00000492422 MYSM1Q5VVJ2 828 aa10.93□□□□□ -0.66
CCDC30-210ENST00000492422 IL21Q9HBE4 155 aa10.93□□□□□ -0.66
CCDC30-210ENST00000492422 MOXD2PA6NHM9 499 aa10.92□□□□□ -0.66
CCDC30-210ENST00000492422 COPS2P61201 443 aa10.92□□□□□ -0.66
CCDC30-210ENST00000492422 SH3D19Q5HYK7 790 aa10.92□□□□□ -0.66
CCDC30-210ENST00000492422 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
CCDC30-210ENST00000492422 NDUFV2P19404 249 aa10.91□□□□□ -0.66
CCDC30-210ENST00000492422 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
CCDC30-210ENST00000492422 SCUBE3Q8IX30 993 aa10.91□□□□□ -0.66
CCDC30-210ENST00000492422 GOPCQ9HD26 462 aa10.91□□□□□ -0.66
CCDC30-210ENST00000492422 SLC27A5Q9Y2P5 690 aa10.91□□□□□ -0.66
CCDC30-210ENST00000492422 SPTLC1O15269 473 aa10.9□□□□□ -0.66
CCDC30-210ENST00000492422 SKIV2LQ15477 1246 aaKnown RBP10.9□□□□□ -0.66
CCDC30-210ENST00000492422 RSBN1LQ6PCB5 846 aaPredicted RBP10.9□□□□□ -0.66
CCDC30-210ENST00000492422 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
CCDC30-210ENST00000492422 FDX1P10109 184 aa10.89□□□□□ -0.67
CCDC30-210ENST00000492422 HLA-CQ95604 372 aa10.89□□□□□ -0.67
CCDC30-210ENST00000492422 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
CCDC30-210ENST00000492422 ZPR1O75312 459 aa10.88□□□□□ -0.67
CCDC30-210ENST00000492422 GUCA2AQ02747 115 aa10.88□□□□□ -0.67
CCDC30-210ENST00000492422 KCNC4Q03721 635 aa10.88□□□□□ -0.67
CCDC30-210ENST00000492422 TUSC1Q2TAM9 212 aa10.88□□□□□ -0.67
CCDC30-210ENST00000492422 Q3C1V9 767 aa10.88□□□□□ -0.67
CCDC30-210ENST00000492422 CLK2P49760 499 aaKnown RBP10.87□□□□□ -0.67
CCDC30-210ENST00000492422 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
CCDC30-210ENST00000492422 ZNF516Q92618 1163 aa10.86□□□□□ -0.67
CCDC30-210ENST00000492422 PCDHGC3Q9UN70 934 aa10.86□□□□□ -0.67
CCDC30-210ENST00000492422 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms