RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 ADGRL2O95490 1459 aa8.18□□□□□ -1.1
CCDC6-202ENST00000491922 COL17A1Q9UMD9 1497 aaPredicted RBP8.18□□□□□ -1.1
CCDC6-202ENST00000491922 RBM10P98175 930 aaKnown RBP8.18□□□□□ -1.1
CCDC6-202ENST00000491922 NKTRP30414 1462 aaKnown RBP8.18□□□□□ -1.1
CCDC6-202ENST00000491922 LAMC1P11047 1609 aa8.18□□□□□ -1.1
CCDC6-202ENST00000491922 TRPM1Q7Z4N2 1603 aa8.18□□□□□ -1.1
CCDC6-202ENST00000491922 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
CCDC6-202ENST00000491922 IGHDP01880 384 aa8.17□□□□□ -1.1
CCDC6-202ENST00000491922 TOPBP1Q92547 1522 aa8.17□□□□□ -1.1
CCDC6-202ENST00000491922 ANKRD30AQ9BXX3 1397 aa8.17□□□□□ -1.1
CCDC6-202ENST00000491922 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
CCDC6-202ENST00000491922 SLFN5Q08AF3 891 aa8.17□□□□□ -1.1
CCDC6-202ENST00000491922 ADAMTS8Q9UP79 889 aa8.17□□□□□ -1.1
CCDC6-202ENST00000491922 PTMSP20962 102 aa8.16□□□□□ -1.1
CCDC6-202ENST00000491922 PDE3AQ14432 1141 aa8.16□□□□□ -1.1
CCDC6-202ENST00000491922 CC2D1BQ5T0F9 858 aaKnown RBP8.16□□□□□ -1.1
CCDC6-202ENST00000491922 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.16□□□□□ -1.1
CCDC6-202ENST00000491922 TRMT2AQ8IZ69 625 aaKnown RBP8.16□□□□□ -1.1
CCDC6-202ENST00000491922 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
CCDC6-202ENST00000491922 SCAPERQ9BY12 1400 aa8.16□□□□□ -1.1
CCDC6-202ENST00000491922 OFD1O75665 1012 aa8.16□□□□□ -1.1
CCDC6-202ENST00000491922 WDR43Q15061 677 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC6-202ENST00000491922 CCDC173Q0VFZ6 552 aa8.16□□□□□ -1.1
CCDC6-202ENST00000491922 CLUAP1Q96AJ1 413 aa8.16□□□□□ -1.1
CCDC6-202ENST00000491922 PLXNC1O60486 1568 aa8.15□□□□□ -1.1
CCDC6-202ENST00000491922 ITSN2Q9NZM3 1697 aa8.15□□□□□ -1.1
CCDC6-202ENST00000491922 SKOR2Q2VWA4 1001 aaPredicted RBP8.15□□□□□ -1.1
CCDC6-202ENST00000491922 MTERF4Q7Z6M4 381 aaKnown RBP8.15□□□□□ -1.1
CCDC6-202ENST00000491922 KDM5DQ9BY66 1539 aa8.15□□□□□ -1.1
CCDC6-202ENST00000491922 ZSCAN30Q86W11 494 aa8.15□□□□□ -1.11
CCDC6-202ENST00000491922 SMAP1Q8IYB5 467 aaPredicted RBP8.15□□□□□ -1.11
CCDC6-202ENST00000491922 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.11
CCDC6-202ENST00000491922 CAMSAP2Q08AD1 1489 aa8.14□□□□□ -1.11
CCDC6-202ENST00000491922 PPP1R9BQ96SB3 815 aa8.14□□□□□ -1.11
CCDC6-202ENST00000491922 EIF4G3O43432 1585 aaKnown RBP8.14□□□□□ -1.11
CCDC6-202ENST00000491922 PRDM15P57071 1507 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-202ENST00000491922 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 NCOA3Q9Y6Q9 1424 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 PANK3Q9H999 370 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 KDM2AQ9Y2K7 1162 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 GPRASP1Q5JY77 1395 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 IFT140Q96RY7 1462 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 ZNF644Q9H582 1327 aaPredicted RBP8.13□□□□□ -1.11
CCDC6-202ENST00000491922 PRAG1Q86YV5 1406 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 MSNP26038 577 aaKnown RBP8.13□□□□□ -1.11
CCDC6-202ENST00000491922 RIPK4P57078 832 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 TAF7LQ5H9L4 462 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 SPRYD3Q8NCJ5 442 aa8.13□□□□□ -1.11
CCDC6-202ENST00000491922 ANP32BQ92688 251 aaKnown RBP8.13□□□□□ -1.11
CCDC6-202ENST00000491922 RTEL1-TNFRSF6BF6WH68 1400 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 URB2Q14146 1524 aaKnown RBP8.12□□□□□ -1.11
CCDC6-202ENST00000491922 E9PSI1 815 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 BCAR3O75815 825 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 HSCBQ8IWL3 235 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 GBP4Q96PP9 640 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 ERBINQ96RT1 1412 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 ANKRD50Q9ULJ7 1429 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 NGEFQ8N5V2 710 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 ZNF692Q9BU19 519 aaPredicted RBP8.12□□□□□ -1.11
CCDC6-202ENST00000491922 C22orf23Q9BZE7 217 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 CIZ1Q9ULV3 898 aaPredicted RBP8.12□□□□□ -1.11
CCDC6-202ENST00000491922 IQGAP2Q13576 1575 aa8.12□□□□□ -1.11
CCDC6-202ENST00000491922 DISP3Q9P2K9 1392 aa8.11□□□□□ -1.11
CCDC6-202ENST00000491922 HS1BP3Q53T59 392 aa8.11□□□□□ -1.11
CCDC6-202ENST00000491922 PPP2R1AP30153 589 aa8.11□□□□□ -1.11
CCDC6-202ENST00000491922 GAS2L3Q86XJ1 694 aa8.11□□□□□ -1.11
CCDC6-202ENST00000491922 EIF2AK4Q9P2K8 1649 aaKnown RBP8.11□□□□□ -1.11
CCDC6-202ENST00000491922 PIK3C2GO75747 1445 aa8.11□□□□□ -1.11
CCDC6-202ENST00000491922 NUP155O75694 1391 aa8.1□□□□□ -1.11
CCDC6-202ENST00000491922 IBTKQ9P2D0 1353 aaPredicted RBP8.1□□□□□ -1.11
CCDC6-202ENST00000491922 CANXP27824 592 aaKnown RBP8.1□□□□□ -1.11
CCDC6-202ENST00000491922 DDIT3P35638 169 aa8.1□□□□□ -1.11
CCDC6-202ENST00000491922 NASPP49321 788 aaPredicted RBP8.1□□□□□ -1.11
CCDC6-202ENST00000491922 TMF1P82094 1093 aa8.1□□□□□ -1.11
CCDC6-202ENST00000491922 TESK2Q96S53 571 aa8.1□□□□□ -1.11
CCDC6-202ENST00000491922 FAM13BQ9NYF5 915 aa8.1□□□□□ -1.11
CCDC6-202ENST00000491922 UTP14CQ5TAP6 766 aaKnown RBP8.09□□□□□ -1.11
CCDC6-202ENST00000491922 PDZRN3Q9UPQ7 1066 aa8.09□□□□□ -1.11
CCDC6-202ENST00000491922 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
CCDC6-202ENST00000491922 ABCC10Q5T3U5 1492 aa8.09□□□□□ -1.11
CCDC6-202ENST00000491922 DYNC1I1O14576 645 aa8.09□□□□□ -1.11
CCDC6-202ENST00000491922 TNPO1Q92973 898 aaKnown RBP8.09□□□□□ -1.11
CCDC6-202ENST00000491922 RWDD1Q9H446 243 aaPredicted RBP8.09□□□□□ -1.11
CCDC6-202ENST00000491922 ERCC6L2Q5T890 1561 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 PTPRGP23470 1445 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 ZNF500O60304 480 aaPredicted RBP8.08□□□□□ -1.12
CCDC6-202ENST00000491922 SMC5Q8IY18 1101 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 SNX21Q969T3 373 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 SHANK2Q9UPX8 1470 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 FAM135AQ9P2D6 1515 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 SHROOM2Q13796 1616 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
CCDC6-202ENST00000491922 RAB3GAP1Q15042 981 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 CSPP1Q1MSJ5 1256 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 PANK1Q8TE04 598 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 SPINK5Q9NQ38 1064 aaPredicted RBP8.08□□□□□ -1.12
CCDC6-202ENST00000491922 R3HCC1Q9Y3T6 440 aaKnown RBP8.08□□□□□ -1.12
CCDC6-202ENST00000491922 DMRT2Q9Y5R5 561 aa8.08□□□□□ -1.12
CCDC6-202ENST00000491922 UQCRHLA0A096LP55 91 aa8.07□□□□□ -1.12
CCDC6-202ENST00000491922 UQCRHP07919 91 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms