RNA–Protein interactions for RNA: ENST00000491438.2

CNTNAP3B-210, Transcript of contactin associated protein like 3B, human

TSL 2

Gene CNTNAP3B, Length 438 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-210	ENST00000491438	MED14	O60244	1454 aa		13.98	□□□□□ -0.17
CNTNAP3B-210	ENST00000491438	ZFYVE9	O95405	1425 aa		13.97	□□□□□ -0.17
CNTNAP3B-210	ENST00000491438	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
CNTNAP3B-210	ENST00000491438	RIMS2	Q9UQ26	1411 aa		13.96	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	DHX57	Q6P158	1386 aa	Known RBP	13.96	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	TXNDC2	Q86VQ3	553 aa		13.95	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	IQGAP1	P46940	1657 aa		13.95	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	RPGRIP1L	Q68CZ1	1315 aa		13.94	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	NCKAP5L	Q9HCH0	1330 aa		13.94	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	NPHP4	O75161	1426 aa	Predicted RBP	13.94	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	SPATA31E1	Q6ZUB1	1445 aa		13.94	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	ZNF326	Q5BKZ1	582 aa	Known RBP	13.93	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	NEXMIF	Q5QGS0	1516 aa		13.92	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	PPP1R15A	O75807	674 aa	Predicted RBP	13.92	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	LTK	P29376	864 aa		13.92	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	PLEKHG1	Q9ULL1	1385 aa		13.91	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	PPL	O60437	1756 aa		13.9	□□□□□ -0.18
CNTNAP3B-210	ENST00000491438	DIP2A	Q14689	1571 aa		13.88	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	IFT172	Q9UG01	1749 aa		13.88	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	VGF	O15240	615 aa	Predicted RBP	13.88	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	SETBP1	Q9Y6X0	1596 aa		13.87	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	RGL3	Q3MIN7	710 aa		13.86	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	STAC3	Q96MF2	364 aa		13.86	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	MYOM2	P54296	1465 aa		13.86	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	CLSPN	Q9HAW4	1339 aa		13.85	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.84	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	BCAN	Q96GW7	911 aa		13.84	□□□□□ -0.19
CNTNAP3B-210	ENST00000491438	NRXN3	Q9Y4C0	1643 aa		13.83	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	ADAMTS13	Q76LX8	1427 aa		13.83	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	NRXN1	Q9ULB1	1477 aa		13.82	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	TBX22	Q9Y458	520 aa		13.82	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	PIK3R4	Q99570	1358 aa		13.82	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	CPS1	P31327	1500 aa		13.81	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	PIK3C2G	O75747	1445 aa		13.81	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	LTBP4	Q8N2S1	1624 aa		13.8	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	SLC26A8	Q96RN1	970 aa		13.8	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.8	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	NWD1	Q149M9	1564 aa		13.79	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	LAMC1	P11047	1609 aa		13.79	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	ADGRF5	Q8IZF2	1346 aa		13.79	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	NKTR	P30414	1462 aa	Known RBP	13.79	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	DCAF11	Q8TEB1	546 aa		13.78	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	SIN3A	Q96ST3	1273 aa		13.78	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	ALK	Q9UM73	1620 aa		13.78	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	SETD1A	O15047	1707 aa	Known RBP	13.78	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	CHD2	O14647	1828 aa	Known RBP	13.78	□□□□□ -0.2
CNTNAP3B-210	ENST00000491438	KCNA6	P17658	529 aa		13.77	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	NEUROD1	Q13562	356 aa		13.77	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	IQSEC2	Q5JU85	1478 aa		13.76	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	TONSL	Q96HA7	1378 aa		13.76	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	CCER1	Q8TC90	406 aa	Predicted RBP	13.76	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	STRCP1	A6NGW2	1772 aa		13.75	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	PRAG1	Q86YV5	1406 aa		13.74	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	XRN1	Q8IZH2	1706 aa	Known RBP	13.74	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	L3MBTL2	Q969R5	705 aa		13.74	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	MET	P08581	1390 aa		13.73	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	C14orf93	Q9H972	538 aa	Known RBP	13.73	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	KDM2A	Q9Y2K7	1162 aa		13.73	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	KIAA1210	Q9ULL0	1709 aa		13.73	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	PTCH1	Q13635	1447 aa		13.72	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	LRRC7	Q96NW7	1537 aa		13.71	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	PPP4R3CP	Q6ZMV5	832 aa		13.71	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	CERK	Q8TCT0	537 aa		13.71	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	TIMELESS	Q9UNS1	1208 aa		13.71	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	AMOTL2	Q9Y2J4	779 aa		13.71	□□□□□ -0.21
CNTNAP3B-210	ENST00000491438	PTPRU	Q92729	1446 aa		13.71	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	ASXL1	Q8IXJ9	1541 aa		13.7	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	TECPR2	O15040	1411 aa		13.7	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	NCOA3	Q9Y6Q9	1424 aa		13.7	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	KNDC1	Q76NI1	1749 aa		13.7	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	LRPPRC	P42704	1394 aa	Known RBP	13.7	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	CFAP70	Q5T0N1	1121 aa		13.69	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.69	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	ADGRB1	O14514	1584 aa		13.69	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.68	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	PROSER2	Q86WR7	435 aa	Predicted RBP	13.68	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	TMEM94	Q12767	1356 aa		13.68	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	ABCC11	Q96J66	1382 aa		13.68	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	XIRP1	Q702N8	1843 aa	Known RBP	13.66	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	DLC1	Q96QB1	1528 aa		13.65	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	TRPM1	Q7Z4N2	1603 aa		13.65	□□□□□ -0.22
CNTNAP3B-210	ENST00000491438	FAM135B	Q49AJ0	1406 aa		13.64	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	ROBO2	Q9HCK4	1378 aa		13.64	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	TMEM132E	Q6IEE7	984 aa		13.64	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	SIRT1	Q96EB6	747 aa		13.64	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	MSH6	P52701	1360 aa		13.63	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	DCC	P43146	1447 aa		13.63	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	ADGRL3	Q9HAR2	1447 aa		13.63	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	RALGAPB	Q86X10	1494 aa		13.62	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	NCBP3	Q53F19	620 aa	Known RBP	13.62	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	ROCK2	O75116	1388 aa	Known RBP	13.61	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	GPRASP1	Q5JY77	1395 aa		13.61	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	C14orf37	Q86TY3	774 aa		13.61	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	STK26	Q9P289	416 aa		13.61	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	C19orf44	Q9H6X5	657 aa		13.6	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	NALCN	Q8IZF0	1738 aa		13.59	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.59	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	TOM1	O60784	492 aa		13.59	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	NBPF1	Q3BBV0	1214 aa		13.59	□□□□□ -0.23
CNTNAP3B-210	ENST00000491438	NBPF8	Q3BBV2	869 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms