RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 HS3ST6Q96QI5 342 aa11.29□□□□□ -0.6
NCSTN-213ENST00000491332 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
NCSTN-213ENST00000491332 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
NCSTN-213ENST00000491332 MYSM1Q5VVJ2 828 aa11.28□□□□□ -0.6
NCSTN-213ENST00000491332 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
NCSTN-213ENST00000491332 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
NCSTN-213ENST00000491332 TBC1D2Q9BYX2 928 aa11.27□□□□□ -0.61
NCSTN-213ENST00000491332 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.61
NCSTN-213ENST00000491332 SPIRE2Q8WWL2 714 aa11.25□□□□□ -0.61
NCSTN-213ENST00000491332 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
NCSTN-213ENST00000491332 SWT1Q5T5J6 900 aaKnown RBP11.24□□□□□ -0.61
NCSTN-213ENST00000491332 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
NCSTN-213ENST00000491332 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
NCSTN-213ENST00000491332 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
NCSTN-213ENST00000491332 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
NCSTN-213ENST00000491332 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
NCSTN-213ENST00000491332 BHMG1C9JSJ3 638 aaPredicted RBP11.21□□□□□ -0.61
NCSTN-213ENST00000491332 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
NCSTN-213ENST00000491332 TK2O00142 265 aa11.2□□□□□ -0.62
NCSTN-213ENST00000491332 LAPTM4BQ86VI4 370 aa11.19□□□□□ -0.62
NCSTN-213ENST00000491332 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
NCSTN-213ENST00000491332 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
NCSTN-213ENST00000491332 LIMD1Q9UGP4 676 aa11.19□□□□□ -0.62
NCSTN-213ENST00000491332 SLC10A3P09131 477 aa11.18□□□□□ -0.62
NCSTN-213ENST00000491332 GCGRP47871 477 aa11.17□□□□□ -0.62
NCSTN-213ENST00000491332 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
NCSTN-213ENST00000491332 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
NCSTN-213ENST00000491332 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
NCSTN-213ENST00000491332 MOXD2PA6NHM9 499 aa11.16□□□□□ -0.62
NCSTN-213ENST00000491332 SPTLC1O15269 473 aa11.16□□□□□ -0.62
NCSTN-213ENST00000491332 FLIIQ13045 1269 aa11.16□□□□□ -0.62
NCSTN-213ENST00000491332 RSBN1LQ6PCB5 846 aaPredicted RBP11.16□□□□□ -0.62
NCSTN-213ENST00000491332 ADGRD1Q6QNK2 874 aa11.16□□□□□ -0.62
NCSTN-213ENST00000491332 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
NCSTN-213ENST00000491332 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
NCSTN-213ENST00000491332 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
NCSTN-213ENST00000491332 KDM4AO75164 1064 aa11.14□□□□□ -0.63
NCSTN-213ENST00000491332 HDGFP51858 240 aaKnown RBP11.14□□□□□ -0.63
NCSTN-213ENST00000491332 RSPH4AQ5TD94 716 aa11.14□□□□□ -0.63
NCSTN-213ENST00000491332 HRO43593 1189 aa11.13□□□□□ -0.63
NCSTN-213ENST00000491332 NDUFV2P19404 249 aa11.13□□□□□ -0.63
NCSTN-213ENST00000491332 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
NCSTN-213ENST00000491332 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
NCSTN-213ENST00000491332 GJA5P36382 358 aa11.12□□□□□ -0.63
NCSTN-213ENST00000491332 MRPL50Q8N5N7 158 aaKnown RBP11.12□□□□□ -0.63
NCSTN-213ENST00000491332 ZMYND15Q9H091 742 aa11.12□□□□□ -0.63
NCSTN-213ENST00000491332 HOXA2O43364 376 aa11.11□□□□□ -0.63
NCSTN-213ENST00000491332 RFC5P40937 340 aa11.11□□□□□ -0.63
NCSTN-213ENST00000491332 USP46P62068 366 aa11.11□□□□□ -0.63
NCSTN-213ENST00000491332 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
NCSTN-213ENST00000491332 SLC4A3P48751 1232 aa11.1□□□□□ -0.63
NCSTN-213ENST00000491332 MCM6Q14566 821 aa11.1□□□□□ -0.63
NCSTN-213ENST00000491332 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
NCSTN-213ENST00000491332 PCDHB15Q9Y5E8 787 aa11.09□□□□□ -0.63
NCSTN-213ENST00000491332 LILRB3O75022 631 aa11.07□□□□□ -0.64
NCSTN-213ENST00000491332 RNF40O75150 1001 aa11.07□□□□□ -0.64
NCSTN-213ENST00000491332 CFHP08603 1231 aa11.07□□□□□ -0.64
NCSTN-213ENST00000491332 QPCTQ16769 361 aa11.07□□□□□ -0.64
NCSTN-213ENST00000491332 HLA-CQ95604 372 aa11.07□□□□□ -0.64
NCSTN-213ENST00000491332 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
NCSTN-213ENST00000491332 SUPT5HO00267 1087 aaKnown RBP11.05□□□□□ -0.64
NCSTN-213ENST00000491332 FDX1P10109 184 aa11.05□□□□□ -0.64
NCSTN-213ENST00000491332 GUCA2AQ02747 115 aa11.05□□□□□ -0.64
NCSTN-213ENST00000491332 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
NCSTN-213ENST00000491332 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
NCSTN-213ENST00000491332 FUT2Q10981 343 aa11.04□□□□□ -0.64
NCSTN-213ENST00000491332 PRPF38BQ5VTL8 546 aaKnown RBP11.04□□□□□ -0.64
NCSTN-213ENST00000491332 BANK1Q8NDB2 785 aa11.04□□□□□ -0.64
NCSTN-213ENST00000491332 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
NCSTN-213ENST00000491332 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
NCSTN-213ENST00000491332 RTL5Q5HYW3 569 aaPredicted RBP11.03□□□□□ -0.64
NCSTN-213ENST00000491332 SPDYE5A6NIY4 337 aa11.02□□□□□ -0.65
NCSTN-213ENST00000491332 TMEM259Q4ZIN3 620 aa11.02□□□□□ -0.65
NCSTN-213ENST00000491332 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
NCSTN-213ENST00000491332 HRCP23327 699 aa11.01□□□□□ -0.65
NCSTN-213ENST00000491332 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
NCSTN-213ENST00000491332 ANKK1Q8NFD2 765 aa11.01□□□□□ -0.65
NCSTN-213ENST00000491332 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
NCSTN-213ENST00000491332 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
NCSTN-213ENST00000491332 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
NCSTN-213ENST00000491332 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
NCSTN-213ENST00000491332 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
NCSTN-213ENST00000491332 NECTIN2Q92692 538 aa11□□□□□ -0.65
NCSTN-213ENST00000491332 CLUAP1Q96AJ1 413 aa11□□□□□ -0.65
NCSTN-213ENST00000491332 STAC3Q96MF2 364 aa11□□□□□ -0.65
NCSTN-213ENST00000491332 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
NCSTN-213ENST00000491332 GOLGA8CPA6NN73 597 aa10.99□□□□□ -0.65
NCSTN-213ENST00000491332 NUTM2BA6NNL0 878 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-213ENST00000491332 NUTM2EB1AL46 878 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-213ENST00000491332 ACTN4O43707 911 aaKnown RBP10.99□□□□□ -0.65
NCSTN-213ENST00000491332 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
NCSTN-213ENST00000491332 NUTM2DQ5VT03 806 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-213ENST00000491332 NUTM2AQ8IVF1 878 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-213ENST00000491332 A6NJR5 290 aa10.98□□□□□ -0.65
NCSTN-213ENST00000491332 BCAMP50895 628 aa10.98□□□□□ -0.65
NCSTN-213ENST00000491332 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
NCSTN-213ENST00000491332 AP1G2O75843 785 aa10.96□□□□□ -0.65
NCSTN-213ENST00000491332 MTMR2Q13614 643 aa10.96□□□□□ -0.65
NCSTN-213ENST00000491332 MTMR14Q8NCE2 650 aa10.96□□□□□ -0.65
NCSTN-213ENST00000491332 WNT2BQ93097 391 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms