RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 TMEM2Q9UHN6 1383 aa15.64■□□□□ 0.09
CACNA1C-227ENST00000491104 ZFYVE9O95405 1425 aa15.64■□□□□ 0.09
CACNA1C-227ENST00000491104 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
CACNA1C-227ENST00000491104 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
CACNA1C-227ENST00000491104 STRCQ7RTU9 1775 aa15.63■□□□□ 0.09
CACNA1C-227ENST00000491104 CLSPNQ9HAW4 1339 aa15.63■□□□□ 0.09
CACNA1C-227ENST00000491104 LTKP29376 864 aa15.61■□□□□ 0.09
CACNA1C-227ENST00000491104 NCKAP5LQ9HCH0 1330 aa15.61■□□□□ 0.09
CACNA1C-227ENST00000491104 SCAF11Q99590 1463 aaKnown RBP15.6■□□□□ 0.09
CACNA1C-227ENST00000491104 TXNDC2Q86VQ3 553 aa15.6■□□□□ 0.09
CACNA1C-227ENST00000491104 IQGAP1P46940 1657 aa15.59■□□□□ 0.09
CACNA1C-227ENST00000491104 TONSLQ96HA7 1378 aa15.59■□□□□ 0.09
CACNA1C-227ENST00000491104 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
CACNA1C-227ENST00000491104 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.08
CACNA1C-227ENST00000491104 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
CACNA1C-227ENST00000491104 ANKLE2Q86XL3 938 aa15.57■□□□□ 0.08
CACNA1C-227ENST00000491104 DCAF11Q8TEB1 546 aa15.57■□□□□ 0.08
CACNA1C-227ENST00000491104 EID1Q9Y6B2 187 aa15.57■□□□□ 0.08
CACNA1C-227ENST00000491104 RPGRIP1LQ68CZ1 1315 aa15.57■□□□□ 0.08
CACNA1C-227ENST00000491104 NRXN3Q9Y4C0 1643 aa15.57■□□□□ 0.08
CACNA1C-227ENST00000491104 ADGRF5Q8IZF2 1346 aa15.56■□□□□ 0.08
CACNA1C-227ENST00000491104 MYOM2P54296 1465 aa15.56■□□□□ 0.08
CACNA1C-227ENST00000491104 NPHP4O75161 1426 aaPredicted RBP15.55■□□□□ 0.08
CACNA1C-227ENST00000491104 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
CACNA1C-227ENST00000491104 PLEKHG1Q9ULL1 1385 aa15.54■□□□□ 0.08
CACNA1C-227ENST00000491104 HDGFP51858 240 aaKnown RBP15.53■□□□□ 0.08
CACNA1C-227ENST00000491104 BCANQ96GW7 911 aa15.53■□□□□ 0.08
CACNA1C-227ENST00000491104 MED14O60244 1454 aa15.52■□□□□ 0.08
CACNA1C-227ENST00000491104 NRXN1Q9ULB1 1477 aa15.52■□□□□ 0.08
CACNA1C-227ENST00000491104 VGFO15240 615 aaPredicted RBP15.52■□□□□ 0.08
CACNA1C-227ENST00000491104 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.07
CACNA1C-227ENST00000491104 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
CACNA1C-227ENST00000491104 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
CACNA1C-227ENST00000491104 ADAMTS13Q76LX8 1427 aa15.51■□□□□ 0.07
CACNA1C-227ENST00000491104 PRAG1Q86YV5 1406 aa15.5■□□□□ 0.07
CACNA1C-227ENST00000491104 ALKQ9UM73 1620 aa15.5■□□□□ 0.07
CACNA1C-227ENST00000491104 SLC26A8Q96RN1 970 aa15.49■□□□□ 0.07
CACNA1C-227ENST00000491104 NBPF8Q3BBV2 869 aa15.48■□□□□ 0.07
CACNA1C-227ENST00000491104 ASXL1Q8IXJ9 1541 aa15.48■□□□□ 0.07
CACNA1C-227ENST00000491104 DIP2AQ14689 1571 aa15.47■□□□□ 0.07
CACNA1C-227ENST00000491104 LAMC1P11047 1609 aa15.46■□□□□ 0.07
CACNA1C-227ENST00000491104 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.07
CACNA1C-227ENST00000491104 CFAP70Q5T0N1 1121 aa15.46■□□□□ 0.07
CACNA1C-227ENST00000491104 KIAA1210Q9ULL0 1709 aa15.45■□□□□ 0.06
CACNA1C-227ENST00000491104 TIMELESSQ9UNS1 1208 aa15.44■□□□□ 0.06
CACNA1C-227ENST00000491104 METP08581 1390 aa15.44■□□□□ 0.06
CACNA1C-227ENST00000491104 STRCP1A6NGW2 1772 aa15.44■□□□□ 0.06
CACNA1C-227ENST00000491104 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
CACNA1C-227ENST00000491104 CHD2O14647 1828 aaKnown RBP15.43■□□□□ 0.06
CACNA1C-227ENST00000491104 ADGRB1O14514 1584 aa15.42■□□□□ 0.06
CACNA1C-227ENST00000491104 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-227ENST00000491104 TBX22Q9Y458 520 aa15.42■□□□□ 0.06
CACNA1C-227ENST00000491104 PTPRUQ92729 1446 aa15.42■□□□□ 0.06
CACNA1C-227ENST00000491104 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
CACNA1C-227ENST00000491104 TMEM132EQ6IEE7 984 aa15.41■□□□□ 0.06
CACNA1C-227ENST00000491104 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
CACNA1C-227ENST00000491104 NWD1Q149M9 1564 aa15.4■□□□□ 0.06
CACNA1C-227ENST00000491104 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
CACNA1C-227ENST00000491104 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-227ENST00000491104 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
CACNA1C-227ENST00000491104 ROCK2O75116 1388 aaKnown RBP15.37■□□□□ 0.05
CACNA1C-227ENST00000491104 KNDC1Q76NI1 1749 aa15.37■□□□□ 0.05
CACNA1C-227ENST00000491104 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
CACNA1C-227ENST00000491104 STK26Q9P289 416 aa15.37■□□□□ 0.05
CACNA1C-227ENST00000491104 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
CACNA1C-227ENST00000491104 ARHGEF28Q8N1W1 1705 aaKnown RBP15.35■□□□□ 0.05
CACNA1C-227ENST00000491104 AMOTL2Q9Y2J4 779 aa15.35■□□□□ 0.05
CACNA1C-227ENST00000491104 LRPPRCP42704 1394 aaKnown RBP15.35■□□□□ 0.05
CACNA1C-227ENST00000491104 CPS1P31327 1500 aa15.34■□□□□ 0.05
CACNA1C-227ENST00000491104 KCNA6P17658 529 aa15.34■□□□□ 0.05
CACNA1C-227ENST00000491104 LTBP4Q8N2S1 1624 aa15.33■□□□□ 0.04
CACNA1C-227ENST00000491104 TRAK1Q9UPV9 953 aa15.33■□□□□ 0.04
CACNA1C-227ENST00000491104 GPRASP1Q5JY77 1395 aa15.33■□□□□ 0.04
CACNA1C-227ENST00000491104 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-227ENST00000491104 ROBO2Q9HCK4 1378 aa15.32■□□□□ 0.04
CACNA1C-227ENST00000491104 NKTRP30414 1462 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-227ENST00000491104 XIRP1Q702N8 1843 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-227ENST00000491104 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
CACNA1C-227ENST00000491104 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
CACNA1C-227ENST00000491104 TECPR2O15040 1411 aa15.31■□□□□ 0.04
CACNA1C-227ENST00000491104 DLC1Q96QB1 1528 aa15.31■□□□□ 0.04
CACNA1C-227ENST00000491104 PTCH1Q13635 1447 aa15.3■□□□□ 0.04
CACNA1C-227ENST00000491104 ABCC11Q96J66 1382 aa15.3■□□□□ 0.04
CACNA1C-227ENST00000491104 LRRC7Q96NW7 1537 aa15.29■□□□□ 0.04
CACNA1C-227ENST00000491104 ZEB1P37275 1124 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-227ENST00000491104 SAFB2Q14151 953 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA1C-227ENST00000491104 WAPLQ7Z5K2 1190 aa15.28■□□□□ 0.04
CACNA1C-227ENST00000491104 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
CACNA1C-227ENST00000491104 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-227ENST00000491104 PROSER2Q86WR7 435 aaPredicted RBP15.27■□□□□ 0.04
CACNA1C-227ENST00000491104 QRICH2Q9H0J4 1663 aa15.27■□□□□ 0.03
CACNA1C-227ENST00000491104 TMEM94Q12767 1356 aa15.26■□□□□ 0.03
CACNA1C-227ENST00000491104 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
CACNA1C-227ENST00000491104 FAM135BQ49AJ0 1406 aa15.26■□□□□ 0.03
CACNA1C-227ENST00000491104 USP47Q96K76 1375 aa15.25■□□□□ 0.03
CACNA1C-227ENST00000491104 POGKQ9P215 609 aa15.24■□□□□ 0.03
CACNA1C-227ENST00000491104 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-227ENST00000491104 CENPJQ9HC77 1338 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-227ENST00000491104 SIRT1Q96EB6 747 aa15.22■□□□□ 0.03
CACNA1C-227ENST00000491104 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms