RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 TMEM131LA2VDJ0 1609 aa20.53■□□□□ 0.88
TRAIP-211ENST00000491060 SPHKAPQ2M3C7 1700 aa20.53■□□□□ 0.88
TRAIP-211ENST00000491060 RBM33Q96EV2 1170 aaKnown RBP20.53■□□□□ 0.88
TRAIP-211ENST00000491060 RIMS2Q9UQ26 1411 aa20.51■□□□□ 0.87
TRAIP-211ENST00000491060 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
TRAIP-211ENST00000491060 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
TRAIP-211ENST00000491060 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
TRAIP-211ENST00000491060 TOM1O60784 492 aa20.46■□□□□ 0.87
TRAIP-211ENST00000491060 FOXD1Q16676 465 aa20.44■□□□□ 0.86
TRAIP-211ENST00000491060 CLTCL1P53675 1640 aa20.44■□□□□ 0.86
TRAIP-211ENST00000491060 HFM1A2PYH4 1435 aa20.44■□□□□ 0.86
TRAIP-211ENST00000491060 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
TRAIP-211ENST00000491060 HSPA1LP34931 641 aa20.42■□□□□ 0.86
TRAIP-211ENST00000491060 KIF1BO60333 1816 aa20.41■□□□□ 0.86
TRAIP-211ENST00000491060 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
TRAIP-211ENST00000491060 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
TRAIP-211ENST00000491060 DISP3Q9P2K9 1392 aa20.41■□□□□ 0.86
TRAIP-211ENST00000491060 ALKQ9UM73 1620 aa20.41■□□□□ 0.86
TRAIP-211ENST00000491060 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
TRAIP-211ENST00000491060 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.85
TRAIP-211ENST00000491060 TMEM94Q12767 1356 aa20.38■□□□□ 0.85
TRAIP-211ENST00000491060 KCNA6P17658 529 aa20.38■□□□□ 0.85
TRAIP-211ENST00000491060 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
TRAIP-211ENST00000491060 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRAIP-211ENST00000491060 TRPM2O94759 1503 aa20.35■□□□□ 0.85
TRAIP-211ENST00000491060 C14orf37Q86TY3 774 aa20.34■□□□□ 0.85
TRAIP-211ENST00000491060 NWD1Q149M9 1564 aa20.33■□□□□ 0.84
TRAIP-211ENST00000491060 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
TRAIP-211ENST00000491060 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
TRAIP-211ENST00000491060 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.84
TRAIP-211ENST00000491060 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
TRAIP-211ENST00000491060 TBX22Q9Y458 520 aa20.27■□□□□ 0.84
TRAIP-211ENST00000491060 NKTRP30414 1462 aaKnown RBP20.26■□□□□ 0.83
TRAIP-211ENST00000491060 RGL3Q3MIN7 710 aa20.25■□□□□ 0.83
TRAIP-211ENST00000491060 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
TRAIP-211ENST00000491060 PTPRUQ92729 1446 aa20.25■□□□□ 0.83
TRAIP-211ENST00000491060 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
TRAIP-211ENST00000491060 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
TRAIP-211ENST00000491060 DIP2AQ14689 1571 aa20.25■□□□□ 0.83
TRAIP-211ENST00000491060 MSH6P52701 1360 aa20.24■□□□□ 0.83
TRAIP-211ENST00000491060 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
TRAIP-211ENST00000491060 PPLO60437 1756 aa20.22■□□□□ 0.83
TRAIP-211ENST00000491060 METP08581 1390 aa20.21■□□□□ 0.83
TRAIP-211ENST00000491060 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
TRAIP-211ENST00000491060 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
TRAIP-211ENST00000491060 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
TRAIP-211ENST00000491060 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
TRAIP-211ENST00000491060 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
TRAIP-211ENST00000491060 PHLPP1O60346 1717 aa20.16■□□□□ 0.82
TRAIP-211ENST00000491060 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
TRAIP-211ENST00000491060 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
TRAIP-211ENST00000491060 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
TRAIP-211ENST00000491060 ATF3P18847 181 aa20.14■□□□□ 0.81
TRAIP-211ENST00000491060 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
TRAIP-211ENST00000491060 PIK3R4Q99570 1358 aa20.13■□□□□ 0.81
TRAIP-211ENST00000491060 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
TRAIP-211ENST00000491060 ADGRF5Q8IZF2 1346 aa20.12■□□□□ 0.81
TRAIP-211ENST00000491060 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
TRAIP-211ENST00000491060 NALCNQ8IZF0 1738 aa20.1■□□□□ 0.81
TRAIP-211ENST00000491060 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
TRAIP-211ENST00000491060 STK26Q9P289 416 aa20.1■□□□□ 0.81
TRAIP-211ENST00000491060 C19orf44Q9H6X5 657 aa20.09■□□□□ 0.81
TRAIP-211ENST00000491060 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.81
TRAIP-211ENST00000491060 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
TRAIP-211ENST00000491060 SPATA31E1Q6ZUB1 1445 aa20.06■□□□□ 0.8
TRAIP-211ENST00000491060 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
TRAIP-211ENST00000491060 DDX17Q92841 729 aaKnown RBP20.04■□□□□ 0.8
TRAIP-211ENST00000491060 ROBO2Q9HCK4 1378 aa20.04■□□□□ 0.8
TRAIP-211ENST00000491060 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.8
TRAIP-211ENST00000491060 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
TRAIP-211ENST00000491060 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
TRAIP-211ENST00000491060 BRINP3Q76B58 766 aa20■□□□□ 0.79
TRAIP-211ENST00000491060 COL16A1Q07092 1604 aaPredicted RBP20■□□□□ 0.79
TRAIP-211ENST00000491060 NUTM2FA1L443 756 aa19.99■□□□□ 0.79
TRAIP-211ENST00000491060 MST1RQ04912 1400 aa19.99■□□□□ 0.79
TRAIP-211ENST00000491060 ANKRD30BQ9BXX2 1392 aa19.98■□□□□ 0.79
TRAIP-211ENST00000491060 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
TRAIP-211ENST00000491060 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
TRAIP-211ENST00000491060 NUTM2BA6NNL0 878 aaPredicted RBP19.96■□□□□ 0.79
TRAIP-211ENST00000491060 NUTM2EB1AL46 878 aaPredicted RBP19.96■□□□□ 0.79
TRAIP-211ENST00000491060 CFAP70Q5T0N1 1121 aa19.96■□□□□ 0.79
TRAIP-211ENST00000491060 NUTM2AQ8IVF1 878 aaPredicted RBP19.96■□□□□ 0.79
TRAIP-211ENST00000491060 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
TRAIP-211ENST00000491060 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
TRAIP-211ENST00000491060 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
TRAIP-211ENST00000491060 PIK3C2GO75747 1445 aa19.94■□□□□ 0.78
TRAIP-211ENST00000491060 MEX3CQ5U5Q3 659 aaKnown RBP19.94■□□□□ 0.78
TRAIP-211ENST00000491060 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
TRAIP-211ENST00000491060 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
TRAIP-211ENST00000491060 JCADQ9P266 1359 aa19.94■□□□□ 0.78
TRAIP-211ENST00000491060 SOCS7O14512 581 aa19.93■□□□□ 0.78
TRAIP-211ENST00000491060 ORAI2Q96SN7 254 aa19.93■□□□□ 0.78
TRAIP-211ENST00000491060 DCCP43146 1447 aa19.93■□□□□ 0.78
TRAIP-211ENST00000491060 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
TRAIP-211ENST00000491060 NHSL1Q5SYE7 1610 aa19.91■□□□□ 0.78
TRAIP-211ENST00000491060 RGS17Q9UGC6 210 aaPredicted RBP19.91■□□□□ 0.78
TRAIP-211ENST00000491060 C1orf167Q5SNV9 1468 aa19.91■□□□□ 0.78
TRAIP-211ENST00000491060 LRPPRCP42704 1394 aaKnown RBP19.9■□□□□ 0.78
TRAIP-211ENST00000491060 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
TRAIP-211ENST00000491060 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms