RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 GCC2Q8IWJ2 1684 aa30.07■■■□□ 2.4
SREBF1-216ENST00000490796 PROSER2Q86WR7 435 aaPredicted RBP30.06■■■□□ 2.4
SREBF1-216ENST00000490796 NUP155O75694 1391 aa30.05■■■□□ 2.4
SREBF1-216ENST00000490796 TMEM94Q12767 1356 aa30.03■■■□□ 2.4
SREBF1-216ENST00000490796 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.02■■■□□ 2.4
SREBF1-216ENST00000490796 RIMS2Q9UQ26 1411 aa30.02■■■□□ 2.4
SREBF1-216ENST00000490796 PHF23Q9BUL5 403 aaPredicted RBP30■■■□□ 2.39
SREBF1-216ENST00000490796 MED1Q15648 1581 aaPredicted RBP29.99■■■□□ 2.39
SREBF1-216ENST00000490796 PLEKHG1Q9ULL1 1385 aa29.99■■■□□ 2.39
SREBF1-216ENST00000490796 IQGAP3Q86VI3 1631 aa29.98■■■□□ 2.39
SREBF1-216ENST00000490796 ZFYVE9O95405 1425 aa29.97■■■□□ 2.39
SREBF1-216ENST00000490796 E9PCH4 1651 aa29.97■■■□□ 2.39
SREBF1-216ENST00000490796 RBM33Q96EV2 1170 aaKnown RBP29.96■■■□□ 2.39
SREBF1-216ENST00000490796 XIRP1Q702N8 1843 aaKnown RBP29.96■■■□□ 2.39
SREBF1-216ENST00000490796 TMEM131LA2VDJ0 1609 aa29.96■■■□□ 2.39
SREBF1-216ENST00000490796 MYO5BQ9ULV0 1848 aa29.95■■■□□ 2.39
SREBF1-216ENST00000490796 NKTRP30414 1462 aaKnown RBP29.93■■■□□ 2.38
SREBF1-216ENST00000490796 NUTM2DQ5VT03 806 aaPredicted RBP29.92■■■□□ 2.38
SREBF1-216ENST00000490796 MSH6P52701 1360 aa29.9■■■□□ 2.38
SREBF1-216ENST00000490796 TBX22Q9Y458 520 aa29.9■■■□□ 2.38
SREBF1-216ENST00000490796 FAM135BQ49AJ0 1406 aa29.89■■■□□ 2.38
SREBF1-216ENST00000490796 NWD1Q149M9 1564 aa29.89■■■□□ 2.38
SREBF1-216ENST00000490796 C14orf37Q86TY3 774 aa29.85■■■□□ 2.37
SREBF1-216ENST00000490796 RRBP1Q9P2E9 1410 aaKnown RBP29.83■■■□□ 2.37
SREBF1-216ENST00000490796 ZNF326Q5BKZ1 582 aaKnown RBP29.82■■■□□ 2.36
SREBF1-216ENST00000490796 CHD2O14647 1828 aaKnown RBP29.8■■■□□ 2.36
SREBF1-216ENST00000490796 SLAIN2Q9P270 581 aa29.79■■■□□ 2.36
SREBF1-216ENST00000490796 ADAMTS13Q76LX8 1427 aa29.78■■■□□ 2.36
SREBF1-216ENST00000490796 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
SREBF1-216ENST00000490796 DIP2AQ14689 1571 aa29.77■■■□□ 2.36
SREBF1-216ENST00000490796 ROBO1Q9Y6N7 1651 aa29.76■■■□□ 2.35
SREBF1-216ENST00000490796 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
SREBF1-216ENST00000490796 SPHKAPQ2M3C7 1700 aa29.74■■■□□ 2.35
SREBF1-216ENST00000490796 NCOA3Q9Y6Q9 1424 aa29.74■■■□□ 2.35
SREBF1-216ENST00000490796 NAIPQ13075 1403 aa29.73■■■□□ 2.35
SREBF1-216ENST00000490796 AMOTL2Q9Y2J4 779 aa29.72■■■□□ 2.35
SREBF1-216ENST00000490796 TRPM2O94759 1503 aa29.71■■■□□ 2.35
SREBF1-216ENST00000490796 ATF3P18847 181 aa29.7■■■□□ 2.35
SREBF1-216ENST00000490796 CADPS2Q86UW7 1296 aa29.69■■■□□ 2.34
SREBF1-216ENST00000490796 C19orf44Q9H6X5 657 aa29.69■■■□□ 2.34
SREBF1-216ENST00000490796 SLC4A1APQ9BWU0 796 aaKnown RBP29.63■■■□□ 2.33
SREBF1-216ENST00000490796 HFM1A2PYH4 1435 aa29.62■■■□□ 2.33
SREBF1-216ENST00000490796 PTPRUQ92729 1446 aa29.61■■■□□ 2.33
SREBF1-216ENST00000490796 CLTCL1P53675 1640 aa29.6■■■□□ 2.33
SREBF1-216ENST00000490796 PHLPP1O60346 1717 aa29.6■■■□□ 2.33
SREBF1-216ENST00000490796 SETBP1Q9Y6X0 1596 aa29.6■■■□□ 2.33
SREBF1-216ENST00000490796 JCADQ9P266 1359 aa29.59■■■□□ 2.33
SREBF1-216ENST00000490796 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.57■■■□□ 2.32
SREBF1-216ENST00000490796 KIF1BO60333 1816 aa29.57■■■□□ 2.32
SREBF1-216ENST00000490796 RGS17Q9UGC6 210 aaPredicted RBP29.56■■■□□ 2.32
SREBF1-216ENST00000490796 METP08581 1390 aa29.54■■■□□ 2.32
SREBF1-216ENST00000490796 NRXN3Q9Y4C0 1643 aa29.54■■■□□ 2.32
SREBF1-216ENST00000490796 VGFO15240 615 aaPredicted RBP29.54■■■□□ 2.32
SREBF1-216ENST00000490796 NEXMIFQ5QGS0 1516 aa29.53■■■□□ 2.32
SREBF1-216ENST00000490796 DCCP43146 1447 aa29.5■■■□□ 2.31
SREBF1-216ENST00000490796 XRN1Q8IZH2 1706 aaKnown RBP29.49■■■□□ 2.31
SREBF1-216ENST00000490796 RPGRIP1LQ68CZ1 1315 aa29.48■■■□□ 2.31
SREBF1-216ENST00000490796 BRINP3Q76B58 766 aa29.47■■■□□ 2.31
SREBF1-216ENST00000490796 COL16A1Q07092 1604 aaPredicted RBP29.46■■■□□ 2.31
SREBF1-216ENST00000490796 MEX3CQ5U5Q3 659 aaKnown RBP29.46■■■□□ 2.31
SREBF1-216ENST00000490796 POTEAQ6S8J7 498 aa29.45■■■□□ 2.31
SREBF1-216ENST00000490796 SPATA31A6Q5VVP1 1343 aa29.45■■■□□ 2.3
SREBF1-216ENST00000490796 AHDC1Q5TGY3 1603 aaPredicted RBP29.43■■■□□ 2.3
SREBF1-216ENST00000490796 FOXD1Q16676 465 aa29.42■■■□□ 2.3
SREBF1-216ENST00000490796 ADGRL3Q9HAR2 1447 aa29.41■■■□□ 2.3
SREBF1-216ENST00000490796 MST1RQ04912 1400 aa29.38■■■□□ 2.29
SREBF1-216ENST00000490796 CCDC144AA2RUR9 1427 aa29.37■■■□□ 2.29
SREBF1-216ENST00000490796 ASXL1Q8IXJ9 1541 aa29.36■■■□□ 2.29
SREBF1-216ENST00000490796 MPHOSPH9Q99550 1183 aa29.36■■■□□ 2.29
SREBF1-216ENST00000490796 NUTM2BA6NNL0 878 aaPredicted RBP29.34■■■□□ 2.29
SREBF1-216ENST00000490796 NUTM2EB1AL46 878 aaPredicted RBP29.34■■■□□ 2.29
SREBF1-216ENST00000490796 RGL3Q3MIN7 710 aa29.34■■■□□ 2.29
SREBF1-216ENST00000490796 NUTM2AQ8IVF1 878 aaPredicted RBP29.34■■■□□ 2.29
SREBF1-216ENST00000490796 PTCH1Q13635 1447 aa29.33■■■□□ 2.29
SREBF1-216ENST00000490796 ACIN1Q9UKV3 1341 aaKnown RBP29.32■■■□□ 2.28
SREBF1-216ENST00000490796 ZNF772Q68DY9 489 aaPredicted RBP29.32■■■□□ 2.28
SREBF1-216ENST00000490796 LRRC59Q96AG4 307 aaKnown RBP29.32■■■□□ 2.28
SREBF1-216ENST00000490796 SHPRHQ149N8 1683 aa29.31■■■□□ 2.28
SREBF1-216ENST00000490796 ROBO2Q9HCK4 1378 aa29.31■■■□□ 2.28
SREBF1-216ENST00000490796 LRP6O75581 1613 aa29.31■■■□□ 2.28
SREBF1-216ENST00000490796 PPLO60437 1756 aa29.29■■■□□ 2.28
SREBF1-216ENST00000490796 NALCNQ8IZF0 1738 aa29.29■■■□□ 2.28
SREBF1-216ENST00000490796 SETD5Q9C0A6 1442 aa29.28■■■□□ 2.28
SREBF1-216ENST00000490796 DDX17Q92841 729 aaKnown RBP29.26■■■□□ 2.27
SREBF1-216ENST00000490796 SETD1AO15047 1707 aaKnown RBP29.25■■■□□ 2.27
SREBF1-216ENST00000490796 ADGRF5Q8IZF2 1346 aa29.25■■■□□ 2.27
SREBF1-216ENST00000490796 ANKRD30BQ9BXX2 1392 aa29.25■■■□□ 2.27
SREBF1-216ENST00000490796 C1orf167Q5SNV9 1468 aa29.24■■■□□ 2.27
SREBF1-216ENST00000490796 NHSL1Q5SYE7 1610 aa29.23■■■□□ 2.27
SREBF1-216ENST00000490796 STK26Q9P289 416 aa29.22■■■□□ 2.27
SREBF1-216ENST00000490796 PRAG1Q86YV5 1406 aa29.21■■■□□ 2.27
SREBF1-216ENST00000490796 SPATA31E1Q6ZUB1 1445 aa29.2■■■□□ 2.27
SREBF1-216ENST00000490796 ORAI2Q96SN7 254 aa29.2■■■□□ 2.26
SREBF1-216ENST00000490796 PNPLA6Q8IY17 1366 aa29.16■■■□□ 2.26
SREBF1-216ENST00000490796 RXRBP28702 533 aa29.16■■■□□ 2.26
SREBF1-216ENST00000490796 AFF2P51816 1311 aa29.15■■■□□ 2.26
SREBF1-216ENST00000490796 C8orf37Q96NL8 207 aa29.14■■■□□ 2.26
SREBF1-216ENST00000490796 ESCO1Q5FWF5 840 aa29.13■■■□□ 2.25
SREBF1-216ENST00000490796 TMEM132EQ6IEE7 984 aa29.13■■■□□ 2.25
SREBF1-216ENST00000490796 LRPPRCP42704 1394 aaKnown RBP29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms