RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 CCDC102AQ96A19 550 aa10.14□□□□□ -0.79
PHC3-212ENST00000490723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
PHC3-212ENST00000490723 PHOX2BQ99453 314 aa10.13□□□□□ -0.79
PHC3-212ENST00000490723 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
PHC3-212ENST00000490723 WBP1LQ9NX94 342 aa10.12□□□□□ -0.79
PHC3-212ENST00000490723 TSR3Q9UJK0 312 aaKnown RBP10.12□□□□□ -0.79
PHC3-212ENST00000490723 PPP4CP60510 307 aa10.11□□□□□ -0.79
PHC3-212ENST00000490723 SLC4A3P48751 1232 aa10.1□□□□□ -0.79
PHC3-212ENST00000490723 SLF2Q8IX21 1173 aa10.1□□□□□ -0.79
PHC3-212ENST00000490723 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
PHC3-212ENST00000490723 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
PHC3-212ENST00000490723 DAXXQ9UER7 740 aaPredicted RBP10.06□□□□□ -0.8
PHC3-212ENST00000490723 AK7Q96M32 723 aa10.04□□□□□ -0.8
PHC3-212ENST00000490723 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
PHC3-212ENST00000490723 NYAP1Q6ZVC0 841 aa10.03□□□□□ -0.8
PHC3-212ENST00000490723 NECTIN2Q92692 538 aa10.03□□□□□ -0.8
PHC3-212ENST00000490723 SLC10A3P09131 477 aa10.02□□□□□ -0.81
PHC3-212ENST00000490723 RDH13Q8NBN7 331 aa10.02□□□□□ -0.81
PHC3-212ENST00000490723 APLP1P51693 650 aa10.01□□□□□ -0.81
PHC3-212ENST00000490723 TRIM66O15016 1216 aa10□□□□□ -0.81
PHC3-212ENST00000490723 CFHP08603 1231 aa10□□□□□ -0.81
PHC3-212ENST00000490723 TTLL12Q14166 644 aaPredicted RBP10□□□□□ -0.81
PHC3-212ENST00000490723 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
PHC3-212ENST00000490723 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
PHC3-212ENST00000490723 CLCN1P35523 988 aa9.99□□□□□ -0.81
PHC3-212ENST00000490723 SULF1Q8IWU6 871 aa9.99□□□□□ -0.81
PHC3-212ENST00000490723 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
PHC3-212ENST00000490723 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
PHC3-212ENST00000490723 AMHR2Q16671 573 aa9.97□□□□□ -0.81
PHC3-212ENST00000490723 KMT5BQ4FZB7 885 aa9.97□□□□□ -0.81
PHC3-212ENST00000490723 PRR14Q9BWN1 585 aa9.96□□□□□ -0.82
PHC3-212ENST00000490723 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
PHC3-212ENST00000490723 TMUB1Q9BVT8 246 aa9.95□□□□□ -0.82
PHC3-212ENST00000490723 PDE4DQ08499 809 aa9.94□□□□□ -0.82
PHC3-212ENST00000490723 FAM217BQ9NTX9 383 aaPredicted RBP9.94□□□□□ -0.82
PHC3-212ENST00000490723 COPS2P61201 443 aa9.93□□□□□ -0.82
PHC3-212ENST00000490723 GIGYF2Q6Y7W6 1299 aaKnown RBP9.93□□□□□ -0.82
PHC3-212ENST00000490723 PARP9Q8IXQ6 854 aa9.93□□□□□ -0.82
PHC3-212ENST00000490723 MTRQ99707 1265 aa9.93□□□□□ -0.82
PHC3-212ENST00000490723 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
PHC3-212ENST00000490723 ACTN4O43707 911 aaKnown RBP9.92□□□□□ -0.82
PHC3-212ENST00000490723 CD46P15529 392 aa9.92□□□□□ -0.82
PHC3-212ENST00000490723 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
PHC3-212ENST00000490723 GCGRP47871 477 aa9.92□□□□□ -0.82
PHC3-212ENST00000490723 TJAP1Q5JTD0 557 aa9.91□□□□□ -0.82
PHC3-212ENST00000490723 KCNC4Q03721 635 aa9.9□□□□□ -0.82
PHC3-212ENST00000490723 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.82
PHC3-212ENST00000490723 ITGBL1O95965 494 aaPredicted RBP9.89□□□□□ -0.83
PHC3-212ENST00000490723 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
PHC3-212ENST00000490723 FUT2Q10981 343 aa9.89□□□□□ -0.83
PHC3-212ENST00000490723 PUS10Q3MIT2 529 aaKnown RBP9.89□□□□□ -0.83
PHC3-212ENST00000490723 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
PHC3-212ENST00000490723 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
PHC3-212ENST00000490723 KDM4AO75164 1064 aa9.85□□□□□ -0.83
PHC3-212ENST00000490723 MS4A1P11836 297 aa9.85□□□□□ -0.83
PHC3-212ENST00000490723 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
PHC3-212ENST00000490723 ZPR1O75312 459 aa9.84□□□□□ -0.83
PHC3-212ENST00000490723 NUTM1Q86Y26 1132 aa9.84□□□□□ -0.83
PHC3-212ENST00000490723 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
PHC3-212ENST00000490723 GPBP1L1Q9HC44 474 aaPredicted RBP9.84□□□□□ -0.83
PHC3-212ENST00000490723 NR1I2O75469 434 aa9.83□□□□□ -0.84
PHC3-212ENST00000490723 NKX2-3Q8TAU0 364 aa9.83□□□□□ -0.84
PHC3-212ENST00000490723 GRIPAP1Q4V328 841 aa9.82□□□□□ -0.84
PHC3-212ENST00000490723 MORN1Q5T089 497 aa9.82□□□□□ -0.84
PHC3-212ENST00000490723 IFFO2Q5TF58 517 aa9.82□□□□□ -0.84
PHC3-212ENST00000490723 SCUBE3Q8IX30 993 aa9.82□□□□□ -0.84
PHC3-212ENST00000490723 TLL1O43897 1013 aa9.81□□□□□ -0.84
PHC3-212ENST00000490723 HLA-CQ95604 372 aa9.81□□□□□ -0.84
PHC3-212ENST00000490723 SLC27A5Q9Y2P5 690 aa9.8□□□□□ -0.84
PHC3-212ENST00000490723 USP46P62068 366 aa9.79□□□□□ -0.84
PHC3-212ENST00000490723 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
PHC3-212ENST00000490723 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
PHC3-212ENST00000490723 HOXA2O43364 376 aa9.78□□□□□ -0.84
PHC3-212ENST00000490723 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
PHC3-212ENST00000490723 NEUROD2Q15784 382 aa9.78□□□□□ -0.84
PHC3-212ENST00000490723 A0A0G2JS52 829 aa9.76□□□□□ -0.85
PHC3-212ENST00000490723 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
PHC3-212ENST00000490723 MOXD2PA6NHM9 499 aa9.75□□□□□ -0.85
PHC3-212ENST00000490723 NDUFV2P19404 249 aa9.75□□□□□ -0.85
PHC3-212ENST00000490723 SPSB2Q99619 263 aa9.75□□□□□ -0.85
PHC3-212ENST00000490723 FMNL1O95466 1100 aaPredicted RBP9.74□□□□□ -0.85
PHC3-212ENST00000490723 ADH1BP00325 375 aa9.74□□□□□ -0.85
PHC3-212ENST00000490723 PPP1R18Q6NYC8 613 aa9.74□□□□□ -0.85
PHC3-212ENST00000490723 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
PHC3-212ENST00000490723 FDX1P10109 184 aa9.73□□□□□ -0.85
PHC3-212ENST00000490723 DIXDC1Q155Q3 683 aa9.73□□□□□ -0.85
PHC3-212ENST00000490723 Q3C1V9 767 aa9.73□□□□□ -0.85
PHC3-212ENST00000490723 THAP11Q96EK4 314 aa9.73□□□□□ -0.85
PHC3-212ENST00000490723 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
PHC3-212ENST00000490723 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
PHC3-212ENST00000490723 BRICD5Q6PL45 260 aa9.72□□□□□ -0.85
PHC3-212ENST00000490723 S1PR4O95977 384 aa9.71□□□□□ -0.86
PHC3-212ENST00000490723 SYMPKQ92797 1274 aaKnown RBP9.71□□□□□ -0.86
PHC3-212ENST00000490723 SLC6A16Q9GZN6 736 aa9.71□□□□□ -0.86
PHC3-212ENST00000490723 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.71□□□□□ -0.86
PHC3-212ENST00000490723 GGCXP38435 758 aa9.7□□□□□ -0.86
PHC3-212ENST00000490723 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
PHC3-212ENST00000490723 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
PHC3-212ENST00000490723 MYSM1Q5VVJ2 828 aa9.69□□□□□ -0.86
PHC3-212ENST00000490723 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms