RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 IDI1Q13907 227 aa15.77■□□□□ 0.12
VARS2-210ENST00000490699 TIMELESSQ9UNS1 1208 aa15.77■□□□□ 0.12
VARS2-210ENST00000490699 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
VARS2-210ENST00000490699 NEURL4Q96JN8 1562 aa15.76■□□□□ 0.11
VARS2-210ENST00000490699 HDGFP51858 240 aaKnown RBP15.76■□□□□ 0.11
VARS2-210ENST00000490699 A2ML1A8K2U0 1454 aa15.76■□□□□ 0.11
VARS2-210ENST00000490699 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
VARS2-210ENST00000490699 ZNF142P52746 1687 aaPredicted RBP15.74■□□□□ 0.11
VARS2-210ENST00000490699 RGL3Q3MIN7 710 aa15.74■□□□□ 0.11
VARS2-210ENST00000490699 THEMISQ8N1K5 641 aaPredicted RBP15.74■□□□□ 0.11
VARS2-210ENST00000490699 TMEM131LA2VDJ0 1609 aa15.72■□□□□ 0.11
VARS2-210ENST00000490699 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
VARS2-210ENST00000490699 STAC3Q96MF2 364 aa15.72■□□□□ 0.11
VARS2-210ENST00000490699 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
VARS2-210ENST00000490699 SPATA31E1Q6ZUB1 1445 aa15.71■□□□□ 0.11
VARS2-210ENST00000490699 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.11
VARS2-210ENST00000490699 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
VARS2-210ENST00000490699 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
VARS2-210ENST00000490699 MYO5BQ9ULV0 1848 aa15.68■□□□□ 0.1
VARS2-210ENST00000490699 VGFO15240 615 aaPredicted RBP15.68■□□□□ 0.1
VARS2-210ENST00000490699 DCAF11Q8TEB1 546 aa15.68■□□□□ 0.1
VARS2-210ENST00000490699 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
VARS2-210ENST00000490699 RIMS2Q9UQ26 1411 aa15.66■□□□□ 0.1
VARS2-210ENST00000490699 TMEM2Q9UHN6 1383 aa15.65■□□□□ 0.1
VARS2-210ENST00000490699 PPLO60437 1756 aa15.65■□□□□ 0.1
VARS2-210ENST00000490699 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
VARS2-210ENST00000490699 BCANQ96GW7 911 aa15.64■□□□□ 0.09
VARS2-210ENST00000490699 IFT172Q9UG01 1749 aa15.64■□□□□ 0.09
VARS2-210ENST00000490699 MYOM2P54296 1465 aa15.64■□□□□ 0.09
VARS2-210ENST00000490699 SLIT1O75093 1534 aa15.63■□□□□ 0.09
VARS2-210ENST00000490699 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
VARS2-210ENST00000490699 ANKLE2Q86XL3 938 aa15.63■□□□□ 0.09
VARS2-210ENST00000490699 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
VARS2-210ENST00000490699 ZFYVE9O95405 1425 aa15.61■□□□□ 0.09
VARS2-210ENST00000490699 SCAF11Q99590 1463 aaKnown RBP15.61■□□□□ 0.09
VARS2-210ENST00000490699 ARHGAP23Q9P227 1491 aa15.6■□□□□ 0.09
VARS2-210ENST00000490699 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
VARS2-210ENST00000490699 POLR1AO95602 1720 aaPredicted RBP15.59■□□□□ 0.09
VARS2-210ENST00000490699 LAMC1P11047 1609 aa15.58■□□□□ 0.09
VARS2-210ENST00000490699 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.08
VARS2-210ENST00000490699 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
VARS2-210ENST00000490699 PLEKHG1Q9ULL1 1385 aa15.56■□□□□ 0.08
VARS2-210ENST00000490699 PIK3C2GO75747 1445 aa15.55■□□□□ 0.08
VARS2-210ENST00000490699 KIAA1210Q9ULL0 1709 aa15.54■□□□□ 0.08
VARS2-210ENST00000490699 NRXN1Q9ULB1 1477 aa15.54■□□□□ 0.08
VARS2-210ENST00000490699 ADGRF5Q8IZF2 1346 aa15.54■□□□□ 0.08
VARS2-210ENST00000490699 HSPA2P54652 639 aa15.54■□□□□ 0.08
VARS2-210ENST00000490699 ROCK2O75116 1388 aaKnown RBP15.53■□□□□ 0.08
VARS2-210ENST00000490699 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
VARS2-210ENST00000490699 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
VARS2-210ENST00000490699 NPHP4O75161 1426 aaPredicted RBP15.52■□□□□ 0.08
VARS2-210ENST00000490699 IQGAP1P46940 1657 aa15.52■□□□□ 0.08
VARS2-210ENST00000490699 LTKP29376 864 aa15.52■□□□□ 0.08
VARS2-210ENST00000490699 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
VARS2-210ENST00000490699 TRPM1Q7Z4N2 1603 aa15.51■□□□□ 0.07
VARS2-210ENST00000490699 MED14O60244 1454 aa15.5■□□□□ 0.07
VARS2-210ENST00000490699 NCKAP5LQ9HCH0 1330 aa15.49■□□□□ 0.07
VARS2-210ENST00000490699 C14orf93Q9H972 538 aaKnown RBP15.49■□□□□ 0.07
VARS2-210ENST00000490699 ALKQ9UM73 1620 aa15.49■□□□□ 0.07
VARS2-210ENST00000490699 NBPF8Q3BBV2 869 aa15.48■□□□□ 0.07
VARS2-210ENST00000490699 CFAP70Q5T0N1 1121 aa15.48■□□□□ 0.07
VARS2-210ENST00000490699 CARD11Q9BXL7 1154 aa15.48■□□□□ 0.07
VARS2-210ENST00000490699 EIF3AQ14152 1382 aaKnown RBP15.47■□□□□ 0.07
VARS2-210ENST00000490699 TBX22Q9Y458 520 aa15.46■□□□□ 0.07
VARS2-210ENST00000490699 NRXN3Q9Y4C0 1643 aa15.46■□□□□ 0.06
VARS2-210ENST00000490699 SLC26A8Q96RN1 970 aa15.45■□□□□ 0.06
VARS2-210ENST00000490699 PIK3R4Q99570 1358 aa15.45■□□□□ 0.06
VARS2-210ENST00000490699 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
VARS2-210ENST00000490699 STRCQ7RTU9 1775 aa15.43■□□□□ 0.06
VARS2-210ENST00000490699 GPRASP1Q5JY77 1395 aa15.42■□□□□ 0.06
VARS2-210ENST00000490699 SETD1AO15047 1707 aaKnown RBP15.41■□□□□ 0.06
VARS2-210ENST00000490699 EIF4G2P78344 907 aaKnown RBP eCLIP15.41■□□□□ 0.06
VARS2-210ENST00000490699 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
VARS2-210ENST00000490699 YTHDC2Q9H6S0 1430 aaKnown RBP15.41■□□□□ 0.06
VARS2-210ENST00000490699 LRPPRCP42704 1394 aaKnown RBP15.4■□□□□ 0.06
VARS2-210ENST00000490699 TMEM132EQ6IEE7 984 aa15.4■□□□□ 0.06
VARS2-210ENST00000490699 STK26Q9P289 416 aa15.4■□□□□ 0.06
VARS2-210ENST00000490699 ADGRB1O14514 1584 aa15.4■□□□□ 0.06
VARS2-210ENST00000490699 USP47Q96K76 1375 aa15.39■□□□□ 0.05
VARS2-210ENST00000490699 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
VARS2-210ENST00000490699 METP08581 1390 aa15.38■□□□□ 0.05
VARS2-210ENST00000490699 KNDC1Q76NI1 1749 aa15.38■□□□□ 0.05
VARS2-210ENST00000490699 POGKQ9P215 609 aa15.38■□□□□ 0.05
VARS2-210ENST00000490699 TRAK1Q9UPV9 953 aa15.38■□□□□ 0.05
VARS2-210ENST00000490699 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
VARS2-210ENST00000490699 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
VARS2-210ENST00000490699 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
VARS2-210ENST00000490699 DLC1Q96QB1 1528 aa15.36■□□□□ 0.05
VARS2-210ENST00000490699 CHD2O14647 1828 aaKnown RBP15.36■□□□□ 0.05
VARS2-210ENST00000490699 CPS1P31327 1500 aa15.35■□□□□ 0.05
VARS2-210ENST00000490699 KCNA6P17658 529 aa15.35■□□□□ 0.05
VARS2-210ENST00000490699 TECPR2O15040 1411 aa15.34■□□□□ 0.05
VARS2-210ENST00000490699 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
VARS2-210ENST00000490699 NKTRP30414 1462 aaKnown RBP15.34■□□□□ 0.05
VARS2-210ENST00000490699 NWD1Q149M9 1564 aa15.34■□□□□ 0.05
VARS2-210ENST00000490699 CENPJQ9HC77 1338 aaPredicted RBP15.34■□□□□ 0.05
VARS2-210ENST00000490699 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
VARS2-210ENST00000490699 ARHGEF28Q8N1W1 1705 aaKnown RBP15.34■□□□□ 0.05
VARS2-210ENST00000490699 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
VARS2-210ENST00000490699 SIRT1Q96EB6 747 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms