RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 NCOA1Q15788 1441 aa18.3■□□□□ 0.52
ARHGEF39-205ENST00000490638 CABP1Q9NZU7 370 aa18.3■□□□□ 0.52
ARHGEF39-205ENST00000490638 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
ARHGEF39-205ENST00000490638 CCDC7Q96M83 1385 aa18.28■□□□□ 0.52
ARHGEF39-205ENST00000490638 KCNJ4P48050 445 aa18.28■□□□□ 0.52
ARHGEF39-205ENST00000490638 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
ARHGEF39-205ENST00000490638 PIP4K2BP78356 416 aa18.28■□□□□ 0.52
ARHGEF39-205ENST00000490638 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
ARHGEF39-205ENST00000490638 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
ARHGEF39-205ENST00000490638 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.52
ARHGEF39-205ENST00000490638 HMOX1P09601 288 aa18.27■□□□□ 0.52
ARHGEF39-205ENST00000490638 PDE3BQ13370 1112 aa18.27■□□□□ 0.51
ARHGEF39-205ENST00000490638 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF39-205ENST00000490638 PLCH2O75038 1416 aa18.26■□□□□ 0.51
ARHGEF39-205ENST00000490638 GPATCH8Q9UKJ3 1502 aaKnown RBP18.26■□□□□ 0.51
ARHGEF39-205ENST00000490638 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
ARHGEF39-205ENST00000490638 THOC2Q8NI27 1593 aaKnown RBP18.26■□□□□ 0.51
ARHGEF39-205ENST00000490638 MTHFSP49914 203 aa18.25■□□□□ 0.51
ARHGEF39-205ENST00000490638 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
ARHGEF39-205ENST00000490638 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
ARHGEF39-205ENST00000490638 MSH5O43196 834 aa18.25■□□□□ 0.51
ARHGEF39-205ENST00000490638 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF39-205ENST00000490638 MAP3K1Q13233 1512 aa18.24■□□□□ 0.51
ARHGEF39-205ENST00000490638 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
ARHGEF39-205ENST00000490638 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
ARHGEF39-205ENST00000490638 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF39-205ENST00000490638 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF39-205ENST00000490638 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF39-205ENST00000490638 EIF5BO60841 1220 aaKnown RBP18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 RIPK4P57078 832 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 FGD1P98174 961 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 WDR7Q9Y4E6 1490 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 RTEL1-TNFRSF6BF6WH68 1400 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 NUP160Q12769 1436 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 RBM33Q96EV2 1170 aaKnown RBP18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 STRN4Q9NRL3 753 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
ARHGEF39-205ENST00000490638 XPCQ01831 940 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF39-205ENST00000490638 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
ARHGEF39-205ENST00000490638 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
ARHGEF39-205ENST00000490638 BECN1Q14457 450 aa18.21■□□□□ 0.51
ARHGEF39-205ENST00000490638 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.51
ARHGEF39-205ENST00000490638 AMOTL2Q9Y2J4 779 aa18.2■□□□□ 0.5
ARHGEF39-205ENST00000490638 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
ARHGEF39-205ENST00000490638 RAPGEF6Q8TEU7 1601 aa18.2■□□□□ 0.5
ARHGEF39-205ENST00000490638 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
ARHGEF39-205ENST00000490638 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
ARHGEF39-205ENST00000490638 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
ARHGEF39-205ENST00000490638 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF39-205ENST00000490638 TAOK2Q9UL54 1235 aa18.17■□□□□ 0.5
ARHGEF39-205ENST00000490638 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
ARHGEF39-205ENST00000490638 RWDD1Q9H446 243 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF39-205ENST00000490638 NECTIN2Q92692 538 aa18.16■□□□□ 0.5
ARHGEF39-205ENST00000490638 HMMRO75330 724 aa18.16■□□□□ 0.5
ARHGEF39-205ENST00000490638 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
ARHGEF39-205ENST00000490638 E9PSI1 815 aa18.16■□□□□ 0.5
ARHGEF39-205ENST00000490638 ADGRF5Q8IZF2 1346 aa18.16■□□□□ 0.5
ARHGEF39-205ENST00000490638 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
ARHGEF39-205ENST00000490638 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
ARHGEF39-205ENST00000490638 ANP32BQ92688 251 aaKnown RBP18.15■□□□□ 0.5
ARHGEF39-205ENST00000490638 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF39-205ENST00000490638 FOXO3O43524 673 aa18.14■□□□□ 0.49
ARHGEF39-205ENST00000490638 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
ARHGEF39-205ENST00000490638 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
ARHGEF39-205ENST00000490638 TOM1L2Q6ZVM7 507 aa18.13■□□□□ 0.49
ARHGEF39-205ENST00000490638 ATAD2Q6PL18 1390 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 TNRQ92752 1358 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 KIAA0556O60303 1618 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 G3V3G9 751 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 DCAF8Q5TAQ9 597 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 TRAPPC8Q9Y2L5 1435 aa18.12■□□□□ 0.49
ARHGEF39-205ENST00000490638 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
ARHGEF39-205ENST00000490638 A2MP01023 1474 aa18.11■□□□□ 0.49
ARHGEF39-205ENST00000490638 KDM5BQ9UGL1 1544 aa18.1■□□□□ 0.49
ARHGEF39-205ENST00000490638 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
ARHGEF39-205ENST00000490638 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF39-205ENST00000490638 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
ARHGEF39-205ENST00000490638 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
ARHGEF39-205ENST00000490638 PPP2R1AP30153 589 aa18.08■□□□□ 0.48
ARHGEF39-205ENST00000490638 GNAI1P63096 354 aa18.08■□□□□ 0.48
ARHGEF39-205ENST00000490638 SULT6B1Q6IMI4 303 aa18.08■□□□□ 0.48
ARHGEF39-205ENST00000490638 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
ARHGEF39-205ENST00000490638 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
ARHGEF39-205ENST00000490638 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
ARHGEF39-205ENST00000490638 HSPA2P54652 639 aa18.07■□□□□ 0.48
ARHGEF39-205ENST00000490638 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
ARHGEF39-205ENST00000490638 PHF8Q9UPP1 1060 aa18.07■□□□□ 0.48
ARHGEF39-205ENST00000490638 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 FKBP5Q13451 457 aaPredicted RBP18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 GAS2L2Q8NHY3 880 aa18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 DDX58O95786 925 aaKnown RBP18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 DDX54Q8TDD1 881 aaKnown RBP18.06■□□□□ 0.48
ARHGEF39-205ENST00000490638 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms