RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 LTKP29376 864 aa25.58■■□□□ 1.69
ERCC3-207ENST00000490062 EID1Q9Y6B2 187 aa25.58■■□□□ 1.69
ERCC3-207ENST00000490062 RPGRIP1LQ68CZ1 1315 aa25.58■■□□□ 1.69
ERCC3-207ENST00000490062 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
ERCC3-207ENST00000490062 TXNDC2Q86VQ3 553 aa25.57■■□□□ 1.68
ERCC3-207ENST00000490062 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.57■■□□□ 1.68
ERCC3-207ENST00000490062 NEXMIFQ5QGS0 1516 aa25.57■■□□□ 1.68
ERCC3-207ENST00000490062 NPHP4O75161 1426 aaPredicted RBP25.56■■□□□ 1.68
ERCC3-207ENST00000490062 IQGAP1P46940 1657 aa25.54■■□□□ 1.68
ERCC3-207ENST00000490062 PLEKHG1Q9ULL1 1385 aa25.53■■□□□ 1.68
ERCC3-207ENST00000490062 PPLO60437 1756 aa25.5■■□□□ 1.67
ERCC3-207ENST00000490062 IFT172Q9UG01 1749 aa25.49■■□□□ 1.67
ERCC3-207ENST00000490062 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
ERCC3-207ENST00000490062 SETBP1Q9Y6X0 1596 aa25.46■■□□□ 1.67
ERCC3-207ENST00000490062 VGFO15240 615 aaPredicted RBP25.45■■□□□ 1.66
ERCC3-207ENST00000490062 STAC3Q96MF2 364 aa25.44■■□□□ 1.66
ERCC3-207ENST00000490062 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
ERCC3-207ENST00000490062 MYOM2P54296 1465 aa25.43■■□□□ 1.66
ERCC3-207ENST00000490062 PPP1R15AO75807 674 aaPredicted RBP25.43■■□□□ 1.66
ERCC3-207ENST00000490062 CLSPNQ9HAW4 1339 aa25.42■■□□□ 1.66
ERCC3-207ENST00000490062 ADAMTS13Q76LX8 1427 aa25.42■■□□□ 1.66
ERCC3-207ENST00000490062 NRXN3Q9Y4C0 1643 aa25.41■■□□□ 1.66
ERCC3-207ENST00000490062 NRXN1Q9ULB1 1477 aa25.4■■□□□ 1.66
ERCC3-207ENST00000490062 RGL3Q3MIN7 710 aa25.4■■□□□ 1.66
ERCC3-207ENST00000490062 TBX22Q9Y458 520 aa25.39■■□□□ 1.66
ERCC3-207ENST00000490062 PIK3R4Q99570 1358 aa25.37■■□□□ 1.65
ERCC3-207ENST00000490062 NUTM2DQ5VT03 806 aaPredicted RBP25.36■■□□□ 1.65
ERCC3-207ENST00000490062 LTBP4Q8N2S1 1624 aa25.35■■□□□ 1.65
ERCC3-207ENST00000490062 PIK3C2GO75747 1445 aa25.35■■□□□ 1.65
ERCC3-207ENST00000490062 SIN3AQ96ST3 1273 aa25.34■■□□□ 1.65
ERCC3-207ENST00000490062 ADGRF5Q8IZF2 1346 aa25.34■■□□□ 1.65
ERCC3-207ENST00000490062 SETD1AO15047 1707 aaKnown RBP25.32■■□□□ 1.64
ERCC3-207ENST00000490062 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
ERCC3-207ENST00000490062 SLC26A8Q96RN1 970 aa25.31■■□□□ 1.64
ERCC3-207ENST00000490062 ALKQ9UM73 1620 aa25.3■■□□□ 1.64
ERCC3-207ENST00000490062 CPS1P31327 1500 aa25.3■■□□□ 1.64
ERCC3-207ENST00000490062 ZNF335Q9H4Z2 1342 aaPredicted RBP25.3■■□□□ 1.64
ERCC3-207ENST00000490062 CHD2O14647 1828 aaKnown RBP25.29■■□□□ 1.64
ERCC3-207ENST00000490062 LAMC1P11047 1609 aa25.27■■□□□ 1.64
ERCC3-207ENST00000490062 KCNA6P17658 529 aa25.27■■□□□ 1.64
ERCC3-207ENST00000490062 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
ERCC3-207ENST00000490062 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
ERCC3-207ENST00000490062 STRCP1A6NGW2 1772 aa25.26■■□□□ 1.63
ERCC3-207ENST00000490062 BCANQ96GW7 911 aa25.26■■□□□ 1.63
ERCC3-207ENST00000490062 NKTRP30414 1462 aaKnown RBP25.25■■□□□ 1.63
ERCC3-207ENST00000490062 L3MBTL2Q969R5 705 aa25.24■■□□□ 1.63
ERCC3-207ENST00000490062 C14orf93Q9H972 538 aaKnown RBP25.24■■□□□ 1.63
ERCC3-207ENST00000490062 IQSEC2Q5JU85 1478 aa25.23■■□□□ 1.63
ERCC3-207ENST00000490062 METP08581 1390 aa25.23■■□□□ 1.63
ERCC3-207ENST00000490062 NEUROD1Q13562 356 aa25.23■■□□□ 1.63
ERCC3-207ENST00000490062 XRN1Q8IZH2 1706 aaKnown RBP25.22■■□□□ 1.63
ERCC3-207ENST00000490062 PTPRUQ92729 1446 aa25.21■■□□□ 1.63
ERCC3-207ENST00000490062 TIMELESSQ9UNS1 1208 aa25.2■■□□□ 1.62
ERCC3-207ENST00000490062 KIAA1210Q9ULL0 1709 aa25.2■■□□□ 1.62
ERCC3-207ENST00000490062 ASXL1Q8IXJ9 1541 aa25.18■■□□□ 1.62
ERCC3-207ENST00000490062 CCER1Q8TC90 406 aaPredicted RBP25.18■■□□□ 1.62
ERCC3-207ENST00000490062 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
ERCC3-207ENST00000490062 LRRC7Q96NW7 1537 aa25.17■■□□□ 1.62
ERCC3-207ENST00000490062 KDM2AQ9Y2K7 1162 aa25.17■■□□□ 1.62
ERCC3-207ENST00000490062 ADGRB1O14514 1584 aa25.16■■□□□ 1.62
ERCC3-207ENST00000490062 TECPR2O15040 1411 aa25.15■■□□□ 1.62
ERCC3-207ENST00000490062 NCOA3Q9Y6Q9 1424 aa25.15■■□□□ 1.62
ERCC3-207ENST00000490062 PTCH1Q13635 1447 aa25.14■■□□□ 1.62
ERCC3-207ENST00000490062 CFAP70Q5T0N1 1121 aa25.14■■□□□ 1.62
ERCC3-207ENST00000490062 CERKQ8TCT0 537 aa25.14■■□□□ 1.62
ERCC3-207ENST00000490062 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
ERCC3-207ENST00000490062 AMOTL2Q9Y2J4 779 aa25.14■■□□□ 1.62
ERCC3-207ENST00000490062 LRPPRCP42704 1394 aaKnown RBP25.13■■□□□ 1.61
ERCC3-207ENST00000490062 ABCC11Q96J66 1382 aa25.13■■□□□ 1.61
ERCC3-207ENST00000490062 KNDC1Q76NI1 1749 aa25.12■■□□□ 1.61
ERCC3-207ENST00000490062 YTHDC2Q9H6S0 1430 aaKnown RBP25.1■■□□□ 1.61
ERCC3-207ENST00000490062 XIRP1Q702N8 1843 aaKnown RBP25.09■■□□□ 1.61
ERCC3-207ENST00000490062 SIRT1Q96EB6 747 aa25.08■■□□□ 1.61
ERCC3-207ENST00000490062 DLC1Q96QB1 1528 aa25.07■■□□□ 1.6
ERCC3-207ENST00000490062 TMEM94Q12767 1356 aa25.06■■□□□ 1.6
ERCC3-207ENST00000490062 TRPM1Q7Z4N2 1603 aa25.06■■□□□ 1.6
ERCC3-207ENST00000490062 PROSER2Q86WR7 435 aaPredicted RBP25.06■■□□□ 1.6
ERCC3-207ENST00000490062 TMEM132EQ6IEE7 984 aa25.05■■□□□ 1.6
ERCC3-207ENST00000490062 FAM135BQ49AJ0 1406 aa25.04■■□□□ 1.6
ERCC3-207ENST00000490062 ROBO2Q9HCK4 1378 aa25.04■■□□□ 1.6
ERCC3-207ENST00000490062 GPRASP1Q5JY77 1395 aa25.03■■□□□ 1.6
ERCC3-207ENST00000490062 NBPF8Q3BBV2 869 aa25.02■■□□□ 1.6
ERCC3-207ENST00000490062 RALGAPBQ86X10 1494 aa25■■□□□ 1.59
ERCC3-207ENST00000490062 DCCP43146 1447 aa24.98■■□□□ 1.59
ERCC3-207ENST00000490062 NBPF1Q3BBV0 1214 aa24.97■■□□□ 1.59
ERCC3-207ENST00000490062 ADGRL3Q9HAR2 1447 aa24.96■■□□□ 1.59
ERCC3-207ENST00000490062 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.58
ERCC3-207ENST00000490062 MSH6P52701 1360 aa24.94■■□□□ 1.58
ERCC3-207ENST00000490062 STK26Q9P289 416 aa24.94■■□□□ 1.58
ERCC3-207ENST00000490062 ARHGEF28Q8N1W1 1705 aaKnown RBP24.94■■□□□ 1.58
ERCC3-207ENST00000490062 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
ERCC3-207ENST00000490062 NALCNQ8IZF0 1738 aa24.92■■□□□ 1.58
ERCC3-207ENST00000490062 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.92■■□□□ 1.58
ERCC3-207ENST00000490062 RBM33Q96EV2 1170 aaKnown RBP24.9■■□□□ 1.58
ERCC3-207ENST00000490062 PLEKHH1Q9ULM0 1364 aa24.9■■□□□ 1.58
ERCC3-207ENST00000490062 TRAK1Q9UPV9 953 aa24.89■■□□□ 1.58
ERCC3-207ENST00000490062 CDC42BPGQ6DT37 1551 aa24.88■■□□□ 1.57
ERCC3-207ENST00000490062 TOM1O60784 492 aa24.88■■□□□ 1.57
ERCC3-207ENST00000490062 WAPLQ7Z5K2 1190 aa24.88■■□□□ 1.57
ERCC3-207ENST00000490062 ADGRB2O60241 1585 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms