RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
LINC01140-207ENST00000490006 PPP1R15AO75807 674 aaPredicted RBP15.28■□□□□ 0.04
LINC01140-207ENST00000490006 TXNDC2Q86VQ3 553 aa15.28■□□□□ 0.04
LINC01140-207ENST00000490006 DCAF11Q8TEB1 546 aa15.27■□□□□ 0.04
LINC01140-207ENST00000490006 EID1Q9Y6B2 187 aa15.27■□□□□ 0.04
LINC01140-207ENST00000490006 CLTCL1P53675 1640 aa15.27■□□□□ 0.04
LINC01140-207ENST00000490006 NLRP1Q9C000 1473 aa15.27■□□□□ 0.03
LINC01140-207ENST00000490006 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
LINC01140-207ENST00000490006 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
LINC01140-207ENST00000490006 A2ML1A8K2U0 1454 aa15.26■□□□□ 0.03
LINC01140-207ENST00000490006 TRPM2O94759 1503 aa15.26■□□□□ 0.03
LINC01140-207ENST00000490006 PIK3C2BO00750 1634 aa15.26■□□□□ 0.03
LINC01140-207ENST00000490006 LTKP29376 864 aa15.24■□□□□ 0.03
LINC01140-207ENST00000490006 KIF1BO60333 1816 aa15.24■□□□□ 0.03
LINC01140-207ENST00000490006 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
LINC01140-207ENST00000490006 MYO3AQ8NEV4 1616 aa15.23■□□□□ 0.03
LINC01140-207ENST00000490006 MYO5BQ9ULV0 1848 aa15.22■□□□□ 0.03
LINC01140-207ENST00000490006 CEP170BQ9Y4F5 1589 aaPredicted RBP15.22■□□□□ 0.03
LINC01140-207ENST00000490006 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC01140-207ENST00000490006 TONSLQ96HA7 1378 aa15.21■□□□□ 0.03
LINC01140-207ENST00000490006 RIMS2Q9UQ26 1411 aa15.21■□□□□ 0.03
LINC01140-207ENST00000490006 TMEM2Q9UHN6 1383 aa15.2■□□□□ 0.02
LINC01140-207ENST00000490006 VGFO15240 615 aaPredicted RBP15.2■□□□□ 0.02
LINC01140-207ENST00000490006 CAPN15O75808 1086 aa15.2■□□□□ 0.02
LINC01140-207ENST00000490006 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
LINC01140-207ENST00000490006 LMTK3Q96Q04 1460 aa15.2■□□□□ 0.02
LINC01140-207ENST00000490006 RPGRIP1LQ68CZ1 1315 aa15.2■□□□□ 0.02
LINC01140-207ENST00000490006 SLC26A8Q96RN1 970 aa15.19■□□□□ 0.02
LINC01140-207ENST00000490006 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
LINC01140-207ENST00000490006 TMEM131LA2VDJ0 1609 aa15.18■□□□□ 0.02
LINC01140-207ENST00000490006 UBR1Q8IWV7 1749 aa15.18■□□□□ 0.02
LINC01140-207ENST00000490006 ADGRB3O60242 1522 aa15.18■□□□□ 0.02
LINC01140-207ENST00000490006 ADGRF5Q8IZF2 1346 aa15.18■□□□□ 0.02
LINC01140-207ENST00000490006 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
LINC01140-207ENST00000490006 DSG3P32926 999 aa15.15■□□□□ 0.02
LINC01140-207ENST00000490006 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
LINC01140-207ENST00000490006 CFAP70Q5T0N1 1121 aa15.12■□□□□ 0.01
LINC01140-207ENST00000490006 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
LINC01140-207ENST00000490006 TMEM132EQ6IEE7 984 aa15.11■□□□□ 0.01
LINC01140-207ENST00000490006 SCAF11Q99590 1463 aaKnown RBP15.11■□□□□ 0.01
LINC01140-207ENST00000490006 ZFYVE9O95405 1425 aa15.11■□□□□ 0.01
LINC01140-207ENST00000490006 STK26Q9P289 416 aa15.11■□□□□ 0.01
LINC01140-207ENST00000490006 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
LINC01140-207ENST00000490006 ARHGAP23Q9P227 1491 aa15.09■□□□□ 0.01
LINC01140-207ENST00000490006 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
LINC01140-207ENST00000490006 SLIT1O75093 1534 aa15.09■□□□□ 0.01
LINC01140-207ENST00000490006 NEXMIFQ5QGS0 1516 aa15.09■□□□□ 0.01
LINC01140-207ENST00000490006 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0
LINC01140-207ENST00000490006 STAC3Q96MF2 364 aa15.08■□□□□ 0
LINC01140-207ENST00000490006 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0
LINC01140-207ENST00000490006 KDM5AP29375 1690 aaKnown RBP15.07■□□□□ 0
LINC01140-207ENST00000490006 PLEKHG1Q9ULL1 1385 aa15.06■□□□□ 0
LINC01140-207ENST00000490006 PPLO60437 1756 aa15.06■□□□□ 0
LINC01140-207ENST00000490006 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
LINC01140-207ENST00000490006 TBX22Q9Y458 520 aa15.06■□□□□ 0
LINC01140-207ENST00000490006 STRCQ7RTU9 1775 aa15.05■□□□□ 0
LINC01140-207ENST00000490006 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
LINC01140-207ENST00000490006 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
LINC01140-207ENST00000490006 AMOTL2Q9Y2J4 779 aa15.03■□□□□ -0
LINC01140-207ENST00000490006 POLR1AO95602 1720 aaPredicted RBP15.02■□□□□ -0
LINC01140-207ENST00000490006 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
LINC01140-207ENST00000490006 METP08581 1390 aa15.01□□□□□ -0.01
LINC01140-207ENST00000490006 ZNF335Q9H4Z2 1342 aaPredicted RBP15.01□□□□□ -0.01
LINC01140-207ENST00000490006 PROSER2Q86WR7 435 aaPredicted RBP15□□□□□ -0.01
LINC01140-207ENST00000490006 CARD11Q9BXL7 1154 aa15□□□□□ -0.01
LINC01140-207ENST00000490006 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
LINC01140-207ENST00000490006 PRAG1Q86YV5 1406 aa15□□□□□ -0.01
LINC01140-207ENST00000490006 MED14O60244 1454 aa15□□□□□ -0.01
LINC01140-207ENST00000490006 IFT172Q9UG01 1749 aa15□□□□□ -0.01
LINC01140-207ENST00000490006 ZEB1P37275 1124 aaPredicted RBP14.99□□□□□ -0.01
LINC01140-207ENST00000490006 SAFB2Q14151 953 aaKnown RBP eCLIP14.99□□□□□ -0.01
LINC01140-207ENST00000490006 IQGAP1P46940 1657 aa14.99□□□□□ -0.01
LINC01140-207ENST00000490006 MYOM2P54296 1465 aa14.99□□□□□ -0.01
LINC01140-207ENST00000490006 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
LINC01140-207ENST00000490006 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
LINC01140-207ENST00000490006 KCNA6P17658 529 aa14.98□□□□□ -0.01
LINC01140-207ENST00000490006 PIK3C2GO75747 1445 aa14.98□□□□□ -0.01
LINC01140-207ENST00000490006 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
LINC01140-207ENST00000490006 C14orf37Q86TY3 774 aa14.98□□□□□ -0.01
LINC01140-207ENST00000490006 POGKQ9P215 609 aa14.98□□□□□ -0.01
LINC01140-207ENST00000490006 NRXN1Q9ULB1 1477 aa14.95□□□□□ -0.02
LINC01140-207ENST00000490006 PTPRUQ92729 1446 aa14.94□□□□□ -0.02
LINC01140-207ENST00000490006 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
LINC01140-207ENST00000490006 SETBP1Q9Y6X0 1596 aa14.94□□□□□ -0.02
LINC01140-207ENST00000490006 NRXN3Q9Y4C0 1643 aa14.94□□□□□ -0.02
LINC01140-207ENST00000490006 PRAM1Q96QH2 718 aa14.93□□□□□ -0.02
LINC01140-207ENST00000490006 YTHDC2Q9H6S0 1430 aaKnown RBP14.92□□□□□ -0.02
LINC01140-207ENST00000490006 LRPPRCP42704 1394 aaKnown RBP14.91□□□□□ -0.02
LINC01140-207ENST00000490006 POTEHQ6S545 545 aa14.9□□□□□ -0.02
LINC01140-207ENST00000490006 MINK1Q8N4C8 1332 aaPredicted RBP14.9□□□□□ -0.02
LINC01140-207ENST00000490006 PIK3R4Q99570 1358 aa14.89□□□□□ -0.03
LINC01140-207ENST00000490006 ABCC11Q96J66 1382 aa14.88□□□□□ -0.03
LINC01140-207ENST00000490006 ROBO2Q9HCK4 1378 aa14.88□□□□□ -0.03
LINC01140-207ENST00000490006 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
LINC01140-207ENST00000490006 CHD2O14647 1828 aaKnown RBP14.87□□□□□ -0.03
LINC01140-207ENST00000490006 ST20-MTHFSA0A0A6YYL1 179 aa14.87□□□□□ -0.03
LINC01140-207ENST00000490006 NUTM2FA1L443 756 aa14.87□□□□□ -0.03
LINC01140-207ENST00000490006 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
LINC01140-207ENST00000490006 DIP2AQ14689 1571 aa14.87□□□□□ -0.03
LINC01140-207ENST00000490006 HSPA5P11021 654 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms