RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 ADGRB3O60242 1522 aa36.03■■■■□ 3.36
KCNC4-207ENST00000489935 NEFLP07196 543 aa36.03■■■■□ 3.36
KCNC4-207ENST00000489935 CFAP70Q5T0N1 1121 aa36.02■■■■□ 3.36
KCNC4-207ENST00000489935 TMC1Q8TDI8 760 aa36.02■■■■□ 3.36
KCNC4-207ENST00000489935 YEATS2Q9ULM3 1422 aa36.02■■■■□ 3.36
KCNC4-207ENST00000489935 CAMSAP1Q5T5Y3 1602 aa36.02■■■■□ 3.36
KCNC4-207ENST00000489935 FAM69CQ0P6D2 419 aa36.01■■■■□ 3.36
KCNC4-207ENST00000489935 PANK3Q9H999 370 aa36.01■■■■□ 3.36
KCNC4-207ENST00000489935 PARD3Q8TEW0 1356 aa35.99■■■■□ 3.35
KCNC4-207ENST00000489935 DIP2BQ9P265 1576 aa35.99■■■■□ 3.35
KCNC4-207ENST00000489935 BCANQ96GW7 911 aa35.98■■■■□ 3.35
KCNC4-207ENST00000489935 BRD4O60885 1362 aaPredicted RBP35.98■■■■□ 3.35
KCNC4-207ENST00000489935 NRXN1Q9ULB1 1477 aa35.98■■■■□ 3.35
KCNC4-207ENST00000489935 SIGLEC1Q9BZZ2 1709 aa35.98■■■■□ 3.35
KCNC4-207ENST00000489935 CHGAP10645 457 aaKnown RBP35.97■■■■□ 3.35
KCNC4-207ENST00000489935 NOS1P29475 1434 aa35.94■■■■□ 3.34
KCNC4-207ENST00000489935 PPLO60437 1756 aa35.92■■■■□ 3.34
KCNC4-207ENST00000489935 EIF3AQ14152 1382 aaKnown RBP35.91■■■■□ 3.34
KCNC4-207ENST00000489935 TSPOAP1O95153 1857 aa35.9■■■■□ 3.34
KCNC4-207ENST00000489935 LRPPRCP42704 1394 aaKnown RBP35.88■■■■□ 3.33
KCNC4-207ENST00000489935 CC2D1BQ5T0F9 858 aaKnown RBP35.87■■■■□ 3.33
KCNC4-207ENST00000489935 PELP1Q8IZL8 1130 aaKnown RBP35.87■■■■□ 3.33
KCNC4-207ENST00000489935 SYNMO15061 1565 aa35.87■■■■□ 3.33
KCNC4-207ENST00000489935 NLRP13Q86W25 1043 aa35.86■■■■□ 3.33
KCNC4-207ENST00000489935 ZMYM4Q5VZL5 1548 aa35.86■■■■□ 3.33
KCNC4-207ENST00000489935 ZC3H13Q5T200 1668 aaKnown RBP35.86■■■■□ 3.33
KCNC4-207ENST00000489935 CDCA8Q53HL2 280 aa35.85■■■■□ 3.33
KCNC4-207ENST00000489935 PIK3C2BO00750 1634 aa35.85■■■■□ 3.33
KCNC4-207ENST00000489935 ARHGAP31Q2M1Z3 1444 aa35.85■■■■□ 3.33
KCNC4-207ENST00000489935 RPGRIP1LQ68CZ1 1315 aa35.81■■■■□ 3.32
KCNC4-207ENST00000489935 PIK3C2GO75747 1445 aa35.81■■■■□ 3.32
KCNC4-207ENST00000489935 MYOM1P52179 1685 aa35.79■■■■□ 3.32
KCNC4-207ENST00000489935 SETBP1Q9Y6X0 1596 aa35.79■■■■□ 3.32
KCNC4-207ENST00000489935 C14orf93Q9H972 538 aaKnown RBP35.78■■■■□ 3.32
KCNC4-207ENST00000489935 KDM5AP29375 1690 aaKnown RBP35.76■■■■□ 3.32
KCNC4-207ENST00000489935 MYO3AQ8NEV4 1616 aa35.75■■■■□ 3.31
KCNC4-207ENST00000489935 SENP3-EIF4A1A0A087X0R7 540 aa35.75■■■■□ 3.31
KCNC4-207ENST00000489935 ERVK-7P63135 1459 aa35.74■■■■□ 3.31
KCNC4-207ENST00000489935 IRX6P78412 446 aaPredicted RBP35.73■■■■□ 3.31
KCNC4-207ENST00000489935 IDI1Q13907 227 aa35.72■■■■□ 3.31
KCNC4-207ENST00000489935 KNSTRNQ9Y448 316 aa35.72■■■■□ 3.31
KCNC4-207ENST00000489935 SMG6Q86US8 1419 aaKnown RBP35.71■■■■□ 3.31
KCNC4-207ENST00000489935 SLC24A1O60721 1099 aa35.71■■■■□ 3.31
KCNC4-207ENST00000489935 ADGRB1O14514 1584 aa35.7■■■■□ 3.31
KCNC4-207ENST00000489935 NEXMIFQ5QGS0 1516 aa35.69■■■■□ 3.3
KCNC4-207ENST00000489935 AMER1Q5JTC6 1135 aaPredicted RBP35.69■■■■□ 3.3
KCNC4-207ENST00000489935 PREX1Q8TCU6 1659 aa35.68■■■■□ 3.3
KCNC4-207ENST00000489935 NUTM2DQ5VT03 806 aaPredicted RBP35.67■■■■□ 3.3
KCNC4-207ENST00000489935 TMEM132EQ6IEE7 984 aa35.66■■■■□ 3.3
KCNC4-207ENST00000489935 TRAK1Q9UPV9 953 aa35.65■■■■□ 3.3
KCNC4-207ENST00000489935 SBNO2Q9Y2G9 1366 aa35.65■■■■□ 3.3
KCNC4-207ENST00000489935 SLC52A1Q9NWF4 448 aa35.65■■■■□ 3.3
KCNC4-207ENST00000489935 CENPJQ9HC77 1338 aaPredicted RBP35.64■■■■□ 3.3
KCNC4-207ENST00000489935 VGFO15240 615 aaPredicted RBP35.63■■■■□ 3.29
KCNC4-207ENST00000489935 NUDCQ9Y266 331 aa35.63■■■■□ 3.29
KCNC4-207ENST00000489935 MYO5BQ9ULV0 1848 aa35.63■■■■□ 3.29
KCNC4-207ENST00000489935 ASXL1Q8IXJ9 1541 aa35.62■■■■□ 3.29
KCNC4-207ENST00000489935 REREQ9P2R6 1566 aa35.62■■■■□ 3.29
KCNC4-207ENST00000489935 KIF13AQ9H1H9 1805 aa35.6■■■■□ 3.29
KCNC4-207ENST00000489935 QRICH2Q9H0J4 1663 aa35.58■■■■□ 3.29
KCNC4-207ENST00000489935 FBXO31Q5XUX0 539 aaPredicted RBP35.58■■■■□ 3.29
KCNC4-207ENST00000489935 AGLP35573 1532 aa35.57■■■■□ 3.29
KCNC4-207ENST00000489935 TMEM131LA2VDJ0 1609 aa35.57■■■■□ 3.29
KCNC4-207ENST00000489935 PPP2R1AP30153 589 aa35.56■■■■□ 3.28
KCNC4-207ENST00000489935 NPC1L1Q9UHC9 1359 aa35.55■■■■□ 3.28
KCNC4-207ENST00000489935 ERICH6BQ5W0A0 696 aa35.54■■■■□ 3.28
KCNC4-207ENST00000489935 ZFYVE9O95405 1425 aa35.53■■■■□ 3.28
KCNC4-207ENST00000489935 CARD14Q9BXL6 1004 aa35.52■■■■□ 3.28
KCNC4-207ENST00000489935 INSRP06213 1382 aa35.5■■■■□ 3.27
KCNC4-207ENST00000489935 TSHZ2Q9NRE2 1034 aa35.49■■■■□ 3.27
KCNC4-207ENST00000489935 PPP6R1Q9UPN7 881 aa35.49■■■■□ 3.27
KCNC4-207ENST00000489935 BLMP54132 1417 aaPredicted RBP35.48■■■■□ 3.27
KCNC4-207ENST00000489935 CLTCQ00610 1675 aaKnown RBP35.48■■■■□ 3.27
KCNC4-207ENST00000489935 ARHGEF28Q8N1W1 1705 aaKnown RBP35.47■■■■□ 3.27
KCNC4-207ENST00000489935 SALL2Q9Y467 1007 aaPredicted RBP35.46■■■■□ 3.27
KCNC4-207ENST00000489935 RNF123Q5XPI4 1314 aa35.43■■■■□ 3.26
KCNC4-207ENST00000489935 ADAMTS8Q9UP79 889 aa35.41■■■■□ 3.26
KCNC4-207ENST00000489935 SENP3Q9H4L4 574 aaPredicted RBP35.4■■■■□ 3.26
KCNC4-207ENST00000489935 PPP4R2Q9NY27 417 aa35.4■■■■□ 3.26
KCNC4-207ENST00000489935 ARHGEF40Q8TER5 1519 aa35.39■■■■□ 3.26
KCNC4-207ENST00000489935 MLECQ14165 292 aa35.39■■■■□ 3.26
KCNC4-207ENST00000489935 SLC12A5Q9H2X9 1139 aa35.38■■■■□ 3.25
KCNC4-207ENST00000489935 PDE3BQ13370 1112 aa35.34■■■■□ 3.25
KCNC4-207ENST00000489935 TULP4Q9NRJ4 1543 aa35.33■■■■□ 3.25
KCNC4-207ENST00000489935 SPATA31D1Q6ZQQ2 1576 aa35.33■■■■□ 3.25
KCNC4-207ENST00000489935 STK26Q9P289 416 aa35.31■■■■□ 3.24
KCNC4-207ENST00000489935 EVC2Q86UK5 1308 aa35.31■■■■□ 3.24
KCNC4-207ENST00000489935 WDR43Q15061 677 aaKnown RBP eCLIP35.31■■■■□ 3.24
KCNC4-207ENST00000489935 STAG3Q9UJ98 1225 aa35.31■■■■□ 3.24
KCNC4-207ENST00000489935 PUS7Q96PZ0 661 aaKnown RBP35.3■■■■□ 3.24
KCNC4-207ENST00000489935 NSD3Q9BZ95 1437 aa35.29■■■■□ 3.24
KCNC4-207ENST00000489935 CDCA7LQ96GN5 454 aa35.29■■■■□ 3.24
KCNC4-207ENST00000489935 SAFB2Q14151 953 aaKnown RBP eCLIP35.27■■■■□ 3.24
KCNC4-207ENST00000489935 A2ML1A8K2U0 1454 aa35.26■■■■□ 3.23
KCNC4-207ENST00000489935 ALKQ9UM73 1620 aa35.25■■■■□ 3.23
KCNC4-207ENST00000489935 PTPRMP28827 1452 aa35.24■■■■□ 3.23
KCNC4-207ENST00000489935 YTHDC2Q9H6S0 1430 aaKnown RBP35.23■■■■□ 3.23
KCNC4-207ENST00000489935 CABP2Q9NPB3 220 aa35.22■■■■□ 3.23
KCNC4-207ENST00000489935 B4GALNT3Q6L9W6 998 aa35.2■■■■□ 3.23
KCNC4-207ENST00000489935 USP32Q8NFA0 1604 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms