RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
GTF3C5-210ENST00000489842 BCANQ96GW7 911 aa13.98□□□□□ -0.17
GTF3C5-210ENST00000489842 ROCK1Q13464 1354 aa13.97□□□□□ -0.17
GTF3C5-210ENST00000489842 ZFYVE9O95405 1425 aa13.97□□□□□ -0.17
GTF3C5-210ENST00000489842 RIMS2Q9UQ26 1411 aa13.97□□□□□ -0.17
GTF3C5-210ENST00000489842 NUP155O75694 1391 aa13.96□□□□□ -0.17
GTF3C5-210ENST00000489842 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.17
GTF3C5-210ENST00000489842 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
GTF3C5-210ENST00000489842 TMEM94Q12767 1356 aa13.96□□□□□ -0.18
GTF3C5-210ENST00000489842 KCNA6P17658 529 aa13.94□□□□□ -0.18
GTF3C5-210ENST00000489842 PROSER2Q86WR7 435 aaPredicted RBP13.94□□□□□ -0.18
GTF3C5-210ENST00000489842 SOCS7O14512 581 aa13.92□□□□□ -0.18
GTF3C5-210ENST00000489842 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
GTF3C5-210ENST00000489842 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
GTF3C5-210ENST00000489842 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
GTF3C5-210ENST00000489842 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
GTF3C5-210ENST00000489842 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
GTF3C5-210ENST00000489842 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.19
GTF3C5-210ENST00000489842 ROBO1Q9Y6N7 1651 aa13.89□□□□□ -0.19
GTF3C5-210ENST00000489842 NAIPQ13075 1403 aa13.89□□□□□ -0.19
GTF3C5-210ENST00000489842 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
GTF3C5-210ENST00000489842 CLTCL1P53675 1640 aa13.87□□□□□ -0.19
GTF3C5-210ENST00000489842 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
GTF3C5-210ENST00000489842 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
GTF3C5-210ENST00000489842 NKTRP30414 1462 aaKnown RBP13.85□□□□□ -0.19
GTF3C5-210ENST00000489842 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
GTF3C5-210ENST00000489842 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
GTF3C5-210ENST00000489842 FOXD1Q16676 465 aa13.83□□□□□ -0.2
GTF3C5-210ENST00000489842 ZNF326Q5BKZ1 582 aaKnown RBP13.83□□□□□ -0.2
GTF3C5-210ENST00000489842 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.83□□□□□ -0.2
GTF3C5-210ENST00000489842 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
GTF3C5-210ENST00000489842 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
GTF3C5-210ENST00000489842 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
GTF3C5-210ENST00000489842 MSH6P52701 1360 aa13.82□□□□□ -0.2
GTF3C5-210ENST00000489842 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
GTF3C5-210ENST00000489842 HDGFP51858 240 aaKnown RBP13.81□□□□□ -0.2
GTF3C5-210ENST00000489842 AMOTL2Q9Y2J4 779 aa13.81□□□□□ -0.2
GTF3C5-210ENST00000489842 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
GTF3C5-210ENST00000489842 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
GTF3C5-210ENST00000489842 PHLPP1O60346 1717 aa13.8□□□□□ -0.2
GTF3C5-210ENST00000489842 METP08581 1390 aa13.8□□□□□ -0.2
GTF3C5-210ENST00000489842 NEXMIFQ5QGS0 1516 aa13.8□□□□□ -0.2
GTF3C5-210ENST00000489842 TRPM2O94759 1503 aa13.79□□□□□ -0.2
GTF3C5-210ENST00000489842 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
GTF3C5-210ENST00000489842 KIF1BO60333 1816 aa13.78□□□□□ -0.2
GTF3C5-210ENST00000489842 HFM1A2PYH4 1435 aa13.77□□□□□ -0.21
GTF3C5-210ENST00000489842 XRN1Q8IZH2 1706 aaKnown RBP13.77□□□□□ -0.21
GTF3C5-210ENST00000489842 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.21
GTF3C5-210ENST00000489842 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
GTF3C5-210ENST00000489842 POTEAQ6S8J7 498 aa13.75□□□□□ -0.21
GTF3C5-210ENST00000489842 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
GTF3C5-210ENST00000489842 DDX17Q92841 729 aaKnown RBP13.74□□□□□ -0.21
GTF3C5-210ENST00000489842 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
GTF3C5-210ENST00000489842 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
GTF3C5-210ENST00000489842 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
GTF3C5-210ENST00000489842 ATF3P18847 181 aa13.72□□□□□ -0.21
GTF3C5-210ENST00000489842 NALCNQ8IZF0 1738 aa13.72□□□□□ -0.21
GTF3C5-210ENST00000489842 LRP6O75581 1613 aa13.72□□□□□ -0.21
GTF3C5-210ENST00000489842 BRINP3Q76B58 766 aa13.71□□□□□ -0.21
GTF3C5-210ENST00000489842 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
GTF3C5-210ENST00000489842 PPLO60437 1756 aa13.7□□□□□ -0.22
GTF3C5-210ENST00000489842 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
GTF3C5-210ENST00000489842 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
GTF3C5-210ENST00000489842 MST1RQ04912 1400 aa13.68□□□□□ -0.22
GTF3C5-210ENST00000489842 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
GTF3C5-210ENST00000489842 JCADQ9P266 1359 aa13.68□□□□□ -0.22
GTF3C5-210ENST00000489842 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
GTF3C5-210ENST00000489842 ADGRF5Q8IZF2 1346 aa13.67□□□□□ -0.22
GTF3C5-210ENST00000489842 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
GTF3C5-210ENST00000489842 ASXL1Q8IXJ9 1541 aa13.66□□□□□ -0.22
GTF3C5-210ENST00000489842 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
GTF3C5-210ENST00000489842 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
GTF3C5-210ENST00000489842 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
GTF3C5-210ENST00000489842 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
GTF3C5-210ENST00000489842 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
GTF3C5-210ENST00000489842 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
GTF3C5-210ENST00000489842 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
GTF3C5-210ENST00000489842 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
GTF3C5-210ENST00000489842 STK26Q9P289 416 aa13.63□□□□□ -0.23
GTF3C5-210ENST00000489842 IFT172Q9UG01 1749 aa13.63□□□□□ -0.23
GTF3C5-210ENST00000489842 ORAI2Q96SN7 254 aa13.62□□□□□ -0.23
GTF3C5-210ENST00000489842 DCCP43146 1447 aa13.62□□□□□ -0.23
GTF3C5-210ENST00000489842 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
GTF3C5-210ENST00000489842 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
GTF3C5-210ENST00000489842 WAPLQ7Z5K2 1190 aa13.61□□□□□ -0.23
GTF3C5-210ENST00000489842 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
GTF3C5-210ENST00000489842 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
GTF3C5-210ENST00000489842 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
GTF3C5-210ENST00000489842 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
GTF3C5-210ENST00000489842 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
GTF3C5-210ENST00000489842 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
GTF3C5-210ENST00000489842 SETD5Q9C0A6 1442 aa13.59□□□□□ -0.23
GTF3C5-210ENST00000489842 SPATA31A6Q5VVP1 1343 aa13.58□□□□□ -0.24
GTF3C5-210ENST00000489842 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.24
GTF3C5-210ENST00000489842 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
GTF3C5-210ENST00000489842 PNPLA6Q8IY17 1366 aa13.56□□□□□ -0.24
GTF3C5-210ENST00000489842 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
GTF3C5-210ENST00000489842 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
GTF3C5-210ENST00000489842 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
GTF3C5-210ENST00000489842 AFF2P51816 1311 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms