RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 NEXMIFQ5QGS0 1516 aa20.2■□□□□ 0.82
VPS26A-205ENST00000489656 IDI1Q13907 227 aa20.19■□□□□ 0.82
VPS26A-205ENST00000489656 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
VPS26A-205ENST00000489656 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
VPS26A-205ENST00000489656 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
VPS26A-205ENST00000489656 TNRQ92752 1358 aa20.18■□□□□ 0.82
VPS26A-205ENST00000489656 SETD1BQ9UPS6 1966 aaKnown RBP20.17■□□□□ 0.82
VPS26A-205ENST00000489656 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
VPS26A-205ENST00000489656 MYO3AQ8NEV4 1616 aa20.14■□□□□ 0.81
VPS26A-205ENST00000489656 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
VPS26A-205ENST00000489656 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
VPS26A-205ENST00000489656 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
VPS26A-205ENST00000489656 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
VPS26A-205ENST00000489656 POLR1AO95602 1720 aaPredicted RBP20.13■□□□□ 0.81
VPS26A-205ENST00000489656 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
VPS26A-205ENST00000489656 ZNF142P52746 1687 aaPredicted RBP20.11■□□□□ 0.81
VPS26A-205ENST00000489656 IQGAP1P46940 1657 aa20.1■□□□□ 0.81
VPS26A-205ENST00000489656 CHGAP10645 457 aaKnown RBP20.1■□□□□ 0.81
VPS26A-205ENST00000489656 ZNF326Q5BKZ1 582 aaKnown RBP20.09■□□□□ 0.81
VPS26A-205ENST00000489656 SETBP1Q9Y6X0 1596 aa20.08■□□□□ 0.81
VPS26A-205ENST00000489656 KCNA4P22459 653 aa20.08■□□□□ 0.81
VPS26A-205ENST00000489656 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
VPS26A-205ENST00000489656 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
VPS26A-205ENST00000489656 CEBPAP49715 358 aaPredicted RBP20.06■□□□□ 0.8
VPS26A-205ENST00000489656 ROCK2O75116 1388 aaKnown RBP20.05■□□□□ 0.8
VPS26A-205ENST00000489656 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
VPS26A-205ENST00000489656 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
VPS26A-205ENST00000489656 EIF4G2P78344 907 aaKnown RBP eCLIP20.04■□□□□ 0.8
VPS26A-205ENST00000489656 VGFO15240 615 aaPredicted RBP20.03■□□□□ 0.8
VPS26A-205ENST00000489656 PTPRMP28827 1452 aa20.03■□□□□ 0.8
VPS26A-205ENST00000489656 SETD1AO15047 1707 aaKnown RBP20.02■□□□□ 0.8
VPS26A-205ENST00000489656 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
VPS26A-205ENST00000489656 SLIT1O75093 1534 aa20.02■□□□□ 0.79
VPS26A-205ENST00000489656 RIMS2Q9UQ26 1411 aa20.02■□□□□ 0.79
VPS26A-205ENST00000489656 USP47Q96K76 1375 aa20.01■□□□□ 0.79
VPS26A-205ENST00000489656 HSPA5P11021 654 aaKnown RBP20■□□□□ 0.79
VPS26A-205ENST00000489656 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
VPS26A-205ENST00000489656 ARHGAP23Q9P227 1491 aa19.99■□□□□ 0.79
VPS26A-205ENST00000489656 NRXN3Q9Y4C0 1643 aa19.99■□□□□ 0.79
VPS26A-205ENST00000489656 ADGRB1O14514 1584 aa19.99■□□□□ 0.79
VPS26A-205ENST00000489656 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
VPS26A-205ENST00000489656 TMEM2Q9UHN6 1383 aa19.97■□□□□ 0.79
VPS26A-205ENST00000489656 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
VPS26A-205ENST00000489656 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
VPS26A-205ENST00000489656 SCAF11Q99590 1463 aaKnown RBP19.96■□□□□ 0.79
VPS26A-205ENST00000489656 ALKQ9UM73 1620 aa19.95■□□□□ 0.78
VPS26A-205ENST00000489656 HDGFP51858 240 aaKnown RBP19.94■□□□□ 0.78
VPS26A-205ENST00000489656 ARHGEF28Q8N1W1 1705 aaKnown RBP19.93■□□□□ 0.78
VPS26A-205ENST00000489656 ASXL1Q8IXJ9 1541 aa19.93■□□□□ 0.78
VPS26A-205ENST00000489656 CFAP70Q5T0N1 1121 aa19.93■□□□□ 0.78
VPS26A-205ENST00000489656 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
VPS26A-205ENST00000489656 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
VPS26A-205ENST00000489656 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
VPS26A-205ENST00000489656 NUTM2DQ5VT03 806 aaPredicted RBP19.89■□□□□ 0.77
VPS26A-205ENST00000489656 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.77
VPS26A-205ENST00000489656 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
VPS26A-205ENST00000489656 PLEKHG1Q9ULL1 1385 aa19.87■□□□□ 0.77
VPS26A-205ENST00000489656 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
VPS26A-205ENST00000489656 DIP2AQ14689 1571 aa19.87■□□□□ 0.77
VPS26A-205ENST00000489656 NCBP3Q53F19 620 aaKnown RBP19.86■□□□□ 0.77
VPS26A-205ENST00000489656 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
VPS26A-205ENST00000489656 MED14O60244 1454 aa19.84■□□□□ 0.77
VPS26A-205ENST00000489656 EID1Q9Y6B2 187 aa19.83■□□□□ 0.77
VPS26A-205ENST00000489656 CCDC7Q96M83 1385 aa19.83■□□□□ 0.76
VPS26A-205ENST00000489656 DLC1Q96QB1 1528 aa19.82■□□□□ 0.76
VPS26A-205ENST00000489656 KDM4FA0A1W2PPD8 638 aa19.82■□□□□ 0.76
VPS26A-205ENST00000489656 LTKP29376 864 aa19.82■□□□□ 0.76
VPS26A-205ENST00000489656 ADAMTS13Q76LX8 1427 aa19.82■□□□□ 0.76
VPS26A-205ENST00000489656 SBNO2Q9Y2G9 1366 aa19.82■□□□□ 0.76
VPS26A-205ENST00000489656 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
VPS26A-205ENST00000489656 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
VPS26A-205ENST00000489656 TXNDC2Q86VQ3 553 aa19.81■□□□□ 0.76
VPS26A-205ENST00000489656 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
VPS26A-205ENST00000489656 TESK2Q96S53 571 aa19.8■□□□□ 0.76
VPS26A-205ENST00000489656 C11orf95C9JLR9 678 aaPredicted RBP19.79■□□□□ 0.76
VPS26A-205ENST00000489656 TMEM132EQ6IEE7 984 aa19.79■□□□□ 0.76
VPS26A-205ENST00000489656 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
VPS26A-205ENST00000489656 CPS1P31327 1500 aa19.77■□□□□ 0.76
VPS26A-205ENST00000489656 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
VPS26A-205ENST00000489656 LRPPRCP42704 1394 aaKnown RBP19.77■□□□□ 0.76
VPS26A-205ENST00000489656 TECPR2O15040 1411 aa19.76■□□□□ 0.75
VPS26A-205ENST00000489656 CHD2O14647 1828 aaKnown RBP19.75■□□□□ 0.75
VPS26A-205ENST00000489656 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
VPS26A-205ENST00000489656 ABCC11Q96J66 1382 aa19.74■□□□□ 0.75
VPS26A-205ENST00000489656 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
VPS26A-205ENST00000489656 METP08581 1390 aa19.73■□□□□ 0.75
VPS26A-205ENST00000489656 ANKLE2Q86XL3 938 aa19.73■□□□□ 0.75
VPS26A-205ENST00000489656 TRAK1Q9UPV9 953 aa19.73■□□□□ 0.75
VPS26A-205ENST00000489656 DISP3Q9P2K9 1392 aa19.72■□□□□ 0.75
VPS26A-205ENST00000489656 MYOM1P52179 1685 aa19.72■□□□□ 0.75
VPS26A-205ENST00000489656 TMF1P82094 1093 aa19.72■□□□□ 0.75
VPS26A-205ENST00000489656 TBX22Q9Y458 520 aa19.72■□□□□ 0.75
VPS26A-205ENST00000489656 CNKSR2Q8WXI2 1034 aa19.71■□□□□ 0.75
VPS26A-205ENST00000489656 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
VPS26A-205ENST00000489656 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
VPS26A-205ENST00000489656 FAM135BQ49AJ0 1406 aa19.69■□□□□ 0.74
VPS26A-205ENST00000489656 SIRT1Q96EB6 747 aa19.69■□□□□ 0.74
VPS26A-205ENST00000489656 LMTK3Q96Q04 1460 aa19.68■□□□□ 0.74
VPS26A-205ENST00000489656 CDCA8Q53HL2 280 aa19.68■□□□□ 0.74
VPS26A-205ENST00000489656 BCANQ96GW7 911 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms