RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 KIF1BO60333 1816 aa20.26■□□□□ 0.83
COL9A1-208ENST00000489611 CDCA8Q53HL2 280 aa20.25■□□□□ 0.83
COL9A1-208ENST00000489611 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
COL9A1-208ENST00000489611 ARHGEF40Q8TER5 1519 aa20.25■□□□□ 0.83
COL9A1-208ENST00000489611 MYOM2P54296 1465 aa20.25■□□□□ 0.83
COL9A1-208ENST00000489611 PARD3Q8TEW0 1356 aa20.25■□□□□ 0.83
COL9A1-208ENST00000489611 ABCC3O15438 1527 aa20.25■□□□□ 0.83
COL9A1-208ENST00000489611 SCAF11Q99590 1463 aaKnown RBP20.24■□□□□ 0.83
COL9A1-208ENST00000489611 LRPPRCP42704 1394 aaKnown RBP20.24■□□□□ 0.83
COL9A1-208ENST00000489611 EIF3AQ14152 1382 aaKnown RBP20.24■□□□□ 0.83
COL9A1-208ENST00000489611 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
COL9A1-208ENST00000489611 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
COL9A1-208ENST00000489611 INSRP06213 1382 aa20.23■□□□□ 0.83
COL9A1-208ENST00000489611 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
COL9A1-208ENST00000489611 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
COL9A1-208ENST00000489611 NPATQ14207 1427 aa20.22■□□□□ 0.83
COL9A1-208ENST00000489611 MLECQ14165 292 aa20.21■□□□□ 0.83
COL9A1-208ENST00000489611 AGLP35573 1532 aa20.21■□□□□ 0.83
COL9A1-208ENST00000489611 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
COL9A1-208ENST00000489611 BCANQ96GW7 911 aa20.21■□□□□ 0.83
COL9A1-208ENST00000489611 DISP3Q9P2K9 1392 aa20.2■□□□□ 0.82
COL9A1-208ENST00000489611 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
COL9A1-208ENST00000489611 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
COL9A1-208ENST00000489611 TSHZ2Q9NRE2 1034 aa20.16■□□□□ 0.82
COL9A1-208ENST00000489611 SYNMO15061 1565 aa20.16■□□□□ 0.82
COL9A1-208ENST00000489611 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
COL9A1-208ENST00000489611 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
COL9A1-208ENST00000489611 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.81
COL9A1-208ENST00000489611 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
COL9A1-208ENST00000489611 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
COL9A1-208ENST00000489611 ARHGAP31Q2M1Z3 1444 aa20.12■□□□□ 0.81
COL9A1-208ENST00000489611 ADGRB3O60242 1522 aa20.12■□□□□ 0.81
COL9A1-208ENST00000489611 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
COL9A1-208ENST00000489611 PANK3Q9H999 370 aa20.11■□□□□ 0.81
COL9A1-208ENST00000489611 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
COL9A1-208ENST00000489611 CFAP65Q6ZU64 1925 aaKnown RBP20.1■□□□□ 0.81
COL9A1-208ENST00000489611 KDM5AP29375 1690 aaKnown RBP20.1■□□□□ 0.81
COL9A1-208ENST00000489611 NOS1P29475 1434 aa20.1■□□□□ 0.81
COL9A1-208ENST00000489611 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
COL9A1-208ENST00000489611 MYO3AQ8NEV4 1616 aa20.09■□□□□ 0.81
COL9A1-208ENST00000489611 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
COL9A1-208ENST00000489611 FBXO31Q5XUX0 539 aaPredicted RBP20.08■□□□□ 0.81
COL9A1-208ENST00000489611 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.8
COL9A1-208ENST00000489611 RNF123Q5XPI4 1314 aa20.08■□□□□ 0.8
COL9A1-208ENST00000489611 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.8
COL9A1-208ENST00000489611 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.8
COL9A1-208ENST00000489611 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
COL9A1-208ENST00000489611 CHGAP10645 457 aaKnown RBP20.07■□□□□ 0.8
COL9A1-208ENST00000489611 CLTCQ00610 1675 aaKnown RBP20.05■□□□□ 0.8
COL9A1-208ENST00000489611 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
COL9A1-208ENST00000489611 PPLO60437 1756 aa20.05■□□□□ 0.8
COL9A1-208ENST00000489611 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
COL9A1-208ENST00000489611 MYOM1P52179 1685 aa20.04■□□□□ 0.8
COL9A1-208ENST00000489611 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
COL9A1-208ENST00000489611 IDI1Q13907 227 aa20.02■□□□□ 0.8
COL9A1-208ENST00000489611 BLMP54132 1417 aaPredicted RBP20.01■□□□□ 0.79
COL9A1-208ENST00000489611 PIK3C2BO00750 1634 aa20■□□□□ 0.79
COL9A1-208ENST00000489611 PREX1Q8TCU6 1659 aa20■□□□□ 0.79
COL9A1-208ENST00000489611 ERVK-7P63135 1459 aa20■□□□□ 0.79
COL9A1-208ENST00000489611 ZMYM3Q14202 1370 aa20■□□□□ 0.79
COL9A1-208ENST00000489611 CC2D1BQ5T0F9 858 aaKnown RBP19.99■□□□□ 0.79
COL9A1-208ENST00000489611 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
COL9A1-208ENST00000489611 ADGRF5Q8IZF2 1346 aa19.99■□□□□ 0.79
COL9A1-208ENST00000489611 SLC52A1Q9NWF4 448 aa19.98■□□□□ 0.79
COL9A1-208ENST00000489611 IRX6P78412 446 aaPredicted RBP19.98■□□□□ 0.79
COL9A1-208ENST00000489611 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
COL9A1-208ENST00000489611 MYT1Q01538 1121 aa19.96■□□□□ 0.79
COL9A1-208ENST00000489611 AMER1Q5JTC6 1135 aaPredicted RBP19.96■□□□□ 0.79
COL9A1-208ENST00000489611 C14orf93Q9H972 538 aaKnown RBP19.94■□□□□ 0.78
COL9A1-208ENST00000489611 SPATA31D1Q6ZQQ2 1576 aa19.93■□□□□ 0.78
COL9A1-208ENST00000489611 CEBPAP49715 358 aaPredicted RBP19.92■□□□□ 0.78
COL9A1-208ENST00000489611 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
COL9A1-208ENST00000489611 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
COL9A1-208ENST00000489611 CENPJQ9HC77 1338 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-208ENST00000489611 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-208ENST00000489611 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
COL9A1-208ENST00000489611 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
COL9A1-208ENST00000489611 ZFYVE9O95405 1425 aa19.91■□□□□ 0.78
COL9A1-208ENST00000489611 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
COL9A1-208ENST00000489611 QRICH2Q9H0J4 1663 aa19.89■□□□□ 0.77
COL9A1-208ENST00000489611 STAG3Q9UJ98 1225 aa19.88■□□□□ 0.77
COL9A1-208ENST00000489611 RBM19Q9Y4C8 960 aaKnown RBP19.88■□□□□ 0.77
COL9A1-208ENST00000489611 NEXMIFQ5QGS0 1516 aa19.87■□□□□ 0.77
COL9A1-208ENST00000489611 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL9A1-208ENST00000489611 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
COL9A1-208ENST00000489611 NGEFQ8N5V2 710 aa19.85■□□□□ 0.77
COL9A1-208ENST00000489611 RCAN3Q9UKA8 241 aa19.85■□□□□ 0.77
COL9A1-208ENST00000489611 TNRQ92752 1358 aa19.85■□□□□ 0.77
COL9A1-208ENST00000489611 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
COL9A1-208ENST00000489611 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
COL9A1-208ENST00000489611 RRP1P56182 461 aaKnown RBP19.82■□□□□ 0.76
COL9A1-208ENST00000489611 MYO5BQ9ULV0 1848 aa19.82■□□□□ 0.76
COL9A1-208ENST00000489611 FER1L4A9Z1Z3 1794 aa19.82■□□□□ 0.76
COL9A1-208ENST00000489611 A2ML1A8K2U0 1454 aa19.82■□□□□ 0.76
COL9A1-208ENST00000489611 B4GALNT3Q6L9W6 998 aa19.81■□□□□ 0.76
COL9A1-208ENST00000489611 ADAMTS8Q9UP79 889 aa19.81■□□□□ 0.76
COL9A1-208ENST00000489611 CCDC136Q96JN2 1154 aa19.8■□□□□ 0.76
COL9A1-208ENST00000489611 ARHGEF28Q8N1W1 1705 aaKnown RBP19.8■□□□□ 0.76
COL9A1-208ENST00000489611 C3P01024 1663 aa19.78■□□□□ 0.76
COL9A1-208ENST00000489611 TRAK1Q9UPV9 953 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms