RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 MYOM2P54296 1465 aa11.96□□□□□ -0.49
CSMD2-209ENST00000489419 IQGAP1P46940 1657 aa11.96□□□□□ -0.5
CSMD2-209ENST00000489419 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.5
CSMD2-209ENST00000489419 LRPPRCP42704 1394 aaKnown RBP11.95□□□□□ -0.5
CSMD2-209ENST00000489419 HECW2Q9P2P5 1572 aa11.95□□□□□ -0.5
CSMD2-209ENST00000489419 DISP3Q9P2K9 1392 aa11.95□□□□□ -0.5
CSMD2-209ENST00000489419 NLRP13Q86W25 1043 aa11.95□□□□□ -0.5
CSMD2-209ENST00000489419 INSRP06213 1382 aa11.93□□□□□ -0.5
CSMD2-209ENST00000489419 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
CSMD2-209ENST00000489419 SMG6Q86US8 1419 aaKnown RBP11.93□□□□□ -0.5
CSMD2-209ENST00000489419 KIF1BO60333 1816 aa11.93□□□□□ -0.5
CSMD2-209ENST00000489419 PPRC1Q5VV67 1664 aaKnown RBP11.93□□□□□ -0.5
CSMD2-209ENST00000489419 SALL2Q9Y467 1007 aaPredicted RBP11.92□□□□□ -0.5
CSMD2-209ENST00000489419 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
CSMD2-209ENST00000489419 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
CSMD2-209ENST00000489419 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
CSMD2-209ENST00000489419 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
CSMD2-209ENST00000489419 NRXN1Q9ULB1 1477 aa11.91□□□□□ -0.5
CSMD2-209ENST00000489419 BCANQ96GW7 911 aa11.91□□□□□ -0.5
CSMD2-209ENST00000489419 PANK3Q9H999 370 aa11.91□□□□□ -0.5
CSMD2-209ENST00000489419 GLI2P10070 1586 aa11.9□□□□□ -0.5
CSMD2-209ENST00000489419 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
CSMD2-209ENST00000489419 IFT172Q9UG01 1749 aa11.9□□□□□ -0.51
CSMD2-209ENST00000489419 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
CSMD2-209ENST00000489419 ADGRB3O60242 1522 aa11.89□□□□□ -0.51
CSMD2-209ENST00000489419 ABCA6Q8N139 1617 aa11.89□□□□□ -0.51
CSMD2-209ENST00000489419 NPATQ14207 1427 aa11.88□□□□□ -0.51
CSMD2-209ENST00000489419 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
CSMD2-209ENST00000489419 SYNMO15061 1565 aa11.88□□□□□ -0.51
CSMD2-209ENST00000489419 ABCC3O15438 1527 aa11.87□□□□□ -0.51
CSMD2-209ENST00000489419 NPC1L1Q9UHC9 1359 aa11.87□□□□□ -0.51
CSMD2-209ENST00000489419 ARHGAP31Q2M1Z3 1444 aa11.87□□□□□ -0.51
CSMD2-209ENST00000489419 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
CSMD2-209ENST00000489419 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
CSMD2-209ENST00000489419 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
CSMD2-209ENST00000489419 UGGT1Q9NYU2 1555 aa11.87□□□□□ -0.51
CSMD2-209ENST00000489419 SETBP1Q9Y6X0 1596 aa11.87□□□□□ -0.51
CSMD2-209ENST00000489419 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
CSMD2-209ENST00000489419 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
CSMD2-209ENST00000489419 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
CSMD2-209ENST00000489419 GGT6Q6P531 493 aa11.86□□□□□ -0.51
CSMD2-209ENST00000489419 NOS1P29475 1434 aa11.85□□□□□ -0.51
CSMD2-209ENST00000489419 DIP2CQ9Y2E4 1556 aa11.85□□□□□ -0.51
CSMD2-209ENST00000489419 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
CSMD2-209ENST00000489419 CFAP70Q5T0N1 1121 aa11.85□□□□□ -0.51
CSMD2-209ENST00000489419 RICTORQ6R327 1708 aa11.85□□□□□ -0.51
CSMD2-209ENST00000489419 RAPGEF3O95398 923 aa11.84□□□□□ -0.51
CSMD2-209ENST00000489419 CCDC136Q96JN2 1154 aa11.84□□□□□ -0.51
CSMD2-209ENST00000489419 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
CSMD2-209ENST00000489419 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
CSMD2-209ENST00000489419 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
CSMD2-209ENST00000489419 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.51
CSMD2-209ENST00000489419 CAMSAP1Q5T5Y3 1602 aa11.83□□□□□ -0.52
CSMD2-209ENST00000489419 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
CSMD2-209ENST00000489419 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
CSMD2-209ENST00000489419 KDM5AP29375 1690 aaKnown RBP11.82□□□□□ -0.52
CSMD2-209ENST00000489419 PIK3C2GO75747 1445 aa11.82□□□□□ -0.52
CSMD2-209ENST00000489419 PPLO60437 1756 aa11.82□□□□□ -0.52
CSMD2-209ENST00000489419 ASXL1Q8IXJ9 1541 aa11.82□□□□□ -0.52
CSMD2-209ENST00000489419 PIK3C2BO00750 1634 aa11.81□□□□□ -0.52
CSMD2-209ENST00000489419 BLMP54132 1417 aaPredicted RBP11.81□□□□□ -0.52
CSMD2-209ENST00000489419 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
CSMD2-209ENST00000489419 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
CSMD2-209ENST00000489419 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
CSMD2-209ENST00000489419 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
CSMD2-209ENST00000489419 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
CSMD2-209ENST00000489419 MYOM1P52179 1685 aa11.79□□□□□ -0.52
CSMD2-209ENST00000489419 ZFYVE9O95405 1425 aa11.79□□□□□ -0.52
CSMD2-209ENST00000489419 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
CSMD2-209ENST00000489419 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
CSMD2-209ENST00000489419 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
CSMD2-209ENST00000489419 CENPJQ9HC77 1338 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-209ENST00000489419 CHGAP10645 457 aaKnown RBP11.79□□□□□ -0.52
CSMD2-209ENST00000489419 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-209ENST00000489419 PPP2R1AP30153 589 aa11.78□□□□□ -0.52
CSMD2-209ENST00000489419 ADGRB1O14514 1584 aa11.78□□□□□ -0.52
CSMD2-209ENST00000489419 RIMBP3CA6NJZ7 1639 aa11.77□□□□□ -0.52
CSMD2-209ENST00000489419 RIMBP3BA6NNM3 1639 aa11.77□□□□□ -0.52
CSMD2-209ENST00000489419 RIMBP3Q9UFD9 1639 aa11.77□□□□□ -0.52
CSMD2-209ENST00000489419 ARXQ96QS3 562 aa11.77□□□□□ -0.52
CSMD2-209ENST00000489419 YEATS2Q9ULM3 1422 aa11.77□□□□□ -0.53
CSMD2-209ENST00000489419 REREQ9P2R6 1566 aa11.76□□□□□ -0.53
CSMD2-209ENST00000489419 SIGLEC1Q9BZZ2 1709 aa11.76□□□□□ -0.53
CSMD2-209ENST00000489419 DIP2BQ9P265 1576 aa11.76□□□□□ -0.53
CSMD2-209ENST00000489419 FAM69CQ0P6D2 419 aa11.75□□□□□ -0.53
CSMD2-209ENST00000489419 NEXMIFQ5QGS0 1516 aa11.75□□□□□ -0.53
CSMD2-209ENST00000489419 CFAP65Q6ZU64 1925 aaKnown RBP11.75□□□□□ -0.53
CSMD2-209ENST00000489419 AGLP35573 1532 aa11.75□□□□□ -0.53
CSMD2-209ENST00000489419 IDI1Q13907 227 aa11.74□□□□□ -0.53
CSMD2-209ENST00000489419 WDR43Q15061 677 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSMD2-209ENST00000489419 ADAMTS8Q9UP79 889 aa11.72□□□□□ -0.53
CSMD2-209ENST00000489419 NGEFQ8N5V2 710 aa11.72□□□□□ -0.53
CSMD2-209ENST00000489419 RCAN3Q9UKA8 241 aa11.72□□□□□ -0.53
CSMD2-209ENST00000489419 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
CSMD2-209ENST00000489419 CARD14Q9BXL6 1004 aa11.71□□□□□ -0.53
CSMD2-209ENST00000489419 PREX1Q8TCU6 1659 aa11.71□□□□□ -0.53
CSMD2-209ENST00000489419 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.53
CSMD2-209ENST00000489419 PDIA4P13667 645 aaKnown RBP11.71□□□□□ -0.54
CSMD2-209ENST00000489419 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
CSMD2-209ENST00000489419 TMEM131LA2VDJ0 1609 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms