RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 FNBP4Q8N3X1 1017 aaPredicted RBP13.19□□□□□ -0.3
EXOSC3-206ENST00000489414 CHD4Q14839 1912 aa13.18□□□□□ -0.3
EXOSC3-206ENST00000489414 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
EXOSC3-206ENST00000489414 TET3O43151 1660 aa13.18□□□□□ -0.3
EXOSC3-206ENST00000489414 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
EXOSC3-206ENST00000489414 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
EXOSC3-206ENST00000489414 CLIP1P30622 1438 aa13.17□□□□□ -0.3
EXOSC3-206ENST00000489414 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
EXOSC3-206ENST00000489414 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
EXOSC3-206ENST00000489414 GPATCH8Q9UKJ3 1502 aaKnown RBP13.17□□□□□ -0.3
EXOSC3-206ENST00000489414 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
EXOSC3-206ENST00000489414 CAPN15O75808 1086 aa13.16□□□□□ -0.3
EXOSC3-206ENST00000489414 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
EXOSC3-206ENST00000489414 CDK11AQ9UQ88 783 aaPredicted RBP13.16□□□□□ -0.3
EXOSC3-206ENST00000489414 CDC42BPAQ5VT25 1732 aa13.16□□□□□ -0.3
EXOSC3-206ENST00000489414 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.16□□□□□ -0.3
EXOSC3-206ENST00000489414 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
EXOSC3-206ENST00000489414 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
EXOSC3-206ENST00000489414 NCOA3Q9Y6Q9 1424 aa13.14□□□□□ -0.31
EXOSC3-206ENST00000489414 ASXL1Q8IXJ9 1541 aa13.14□□□□□ -0.31
EXOSC3-206ENST00000489414 BAG6P46379 1132 aa13.14□□□□□ -0.31
EXOSC3-206ENST00000489414 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-206ENST00000489414 ERVK-7P63135 1459 aa13.14□□□□□ -0.31
EXOSC3-206ENST00000489414 CAMSAP2Q08AD1 1489 aa13.14□□□□□ -0.31
EXOSC3-206ENST00000489414 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
EXOSC3-206ENST00000489414 PRELPP51888 382 aa13.13□□□□□ -0.31
EXOSC3-206ENST00000489414 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
EXOSC3-206ENST00000489414 ARHGAP35Q9NRY4 1499 aa13.11□□□□□ -0.31
EXOSC3-206ENST00000489414 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
EXOSC3-206ENST00000489414 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
EXOSC3-206ENST00000489414 DHX29Q7Z478 1369 aaKnown RBP13.1□□□□□ -0.31
EXOSC3-206ENST00000489414 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.312e-9■□□□□ 10.1
EXOSC3-206ENST00000489414 CHD2O14647 1828 aaKnown RBP13.1□□□□□ -0.31
EXOSC3-206ENST00000489414 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
EXOSC3-206ENST00000489414 TMEM2Q9UHN6 1383 aa13.09□□□□□ -0.31
EXOSC3-206ENST00000489414 GLI3P10071 1580 aa13.09□□□□□ -0.31
EXOSC3-206ENST00000489414 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
EXOSC3-206ENST00000489414 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-206ENST00000489414 KIF3BO15066 747 aa13.08□□□□□ -0.32
EXOSC3-206ENST00000489414 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
EXOSC3-206ENST00000489414 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
EXOSC3-206ENST00000489414 ATF3P18847 181 aa13.06□□□□□ -0.32
EXOSC3-206ENST00000489414 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
EXOSC3-206ENST00000489414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
EXOSC3-206ENST00000489414 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
EXOSC3-206ENST00000489414 RANGAP1P46060 587 aaPredicted RBP13.05□□□□□ -0.32
EXOSC3-206ENST00000489414 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
EXOSC3-206ENST00000489414 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
EXOSC3-206ENST00000489414 DISP2A7MBM2 1401 aa13.04□□□□□ -0.32
EXOSC3-206ENST00000489414 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
EXOSC3-206ENST00000489414 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.33
EXOSC3-206ENST00000489414 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
EXOSC3-206ENST00000489414 PLEKHH2Q8IVE3 1493 aa13.02□□□□□ -0.33
EXOSC3-206ENST00000489414 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.33
EXOSC3-206ENST00000489414 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
EXOSC3-206ENST00000489414 PIK3C2BO00750 1634 aa13.01□□□□□ -0.33
EXOSC3-206ENST00000489414 MARF1Q9Y4F3 1742 aaKnown RBP13□□□□□ -0.33
EXOSC3-206ENST00000489414 SPON1Q9HCB6 807 aa13□□□□□ -0.33
EXOSC3-206ENST00000489414 DDX17Q92841 729 aaKnown RBP12.99□□□□□ -0.33
EXOSC3-206ENST00000489414 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
EXOSC3-206ENST00000489414 DCCP43146 1447 aa12.98□□□□□ -0.33
EXOSC3-206ENST00000489414 HSPA6P17066 643 aa12.98□□□□□ -0.33
EXOSC3-206ENST00000489414 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
EXOSC3-206ENST00000489414 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
EXOSC3-206ENST00000489414 MST1RQ04912 1400 aa12.97□□□□□ -0.33
EXOSC3-206ENST00000489414 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-206ENST00000489414 KRT27Q7Z3Y8 459 aa12.97□□□□□ -0.33
EXOSC3-206ENST00000489414 EFCAB6Q5THR3 1501 aa12.97□□□□□ -0.33
EXOSC3-206ENST00000489414 KCNQ2O43526 872 aa12.96□□□□□ -0.33
EXOSC3-206ENST00000489414 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.34
EXOSC3-206ENST00000489414 LAMC1P11047 1609 aa12.95□□□□□ -0.34
EXOSC3-206ENST00000489414 GOLGB1Q14789 3259 aaKnown RBP12.95□□□□□ -0.34
EXOSC3-206ENST00000489414 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
EXOSC3-206ENST00000489414 MYOM2P54296 1465 aa12.94□□□□□ -0.34
EXOSC3-206ENST00000489414 EZH2Q15910 746 aaKnown RBP12.94□□□□□ -0.34
EXOSC3-206ENST00000489414 FMN1Q68DA7 1419 aa12.94□□□□□ -0.34
EXOSC3-206ENST00000489414 RREB1Q92766 1687 aa12.92□□□□□ -0.34
EXOSC3-206ENST00000489414 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
EXOSC3-206ENST00000489414 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
EXOSC3-206ENST00000489414 UNC5CLQ8IV45 518 aa12.91□□□□□ -0.34
EXOSC3-206ENST00000489414 CAMKK2Q96RR4 588 aa12.91□□□□□ -0.34
EXOSC3-206ENST00000489414 SLIT2O94813 1529 aa12.9□□□□□ -0.34
EXOSC3-206ENST00000489414 PCNTO95613 3336 aa12.9□□□□□ -0.34
EXOSC3-206ENST00000489414 CEP152O94986 1710 aa12.9□□□□□ -0.34
EXOSC3-206ENST00000489414 NUP188Q5SRE5 1749 aa12.9□□□□□ -0.34
EXOSC3-206ENST00000489414 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
EXOSC3-206ENST00000489414 ADGRB2O60241 1585 aa12.89□□□□□ -0.35
EXOSC3-206ENST00000489414 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
EXOSC3-206ENST00000489414 ADGRB3O60242 1522 aa12.88□□□□□ -0.35
EXOSC3-206ENST00000489414 PPP1R15AO75807 674 aaPredicted RBP12.88□□□□□ -0.35
EXOSC3-206ENST00000489414 PARD3Q8TEW0 1356 aa12.88□□□□□ -0.35
EXOSC3-206ENST00000489414 MYOM1P52179 1685 aa12.88□□□□□ -0.35
EXOSC3-206ENST00000489414 STAG3Q9UJ98 1225 aa12.87□□□□□ -0.35
EXOSC3-206ENST00000489414 BCANQ96GW7 911 aa12.86□□□□□ -0.35
EXOSC3-206ENST00000489414 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
EXOSC3-206ENST00000489414 ARHGAP31Q2M1Z3 1444 aa12.85□□□□□ -0.35
EXOSC3-206ENST00000489414 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
EXOSC3-206ENST00000489414 CFDP1Q9UEE9 299 aaPredicted RBP12.84□□□□□ -0.35
EXOSC3-206ENST00000489414 TBX22Q9Y458 520 aa12.83□□□□□ -0.36
EXOSC3-206ENST00000489414 TRPM2O94759 1503 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms