RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 FER1L4A9Z1Z3 1794 aa25.34■■□□□ 1.65
CD40-206ENST00000489304 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
CD40-206ENST00000489304 KIAA1210Q9ULL0 1709 aa25.33■■□□□ 1.65
CD40-206ENST00000489304 TMEM131LA2VDJ0 1609 aa25.33■■□□□ 1.64
CD40-206ENST00000489304 PPLO60437 1756 aa25.32■■□□□ 1.64
CD40-206ENST00000489304 NUTM2DQ5VT03 806 aaPredicted RBP25.32■■□□□ 1.64
CD40-206ENST00000489304 TNRQ92752 1358 aa25.31■■□□□ 1.64
CD40-206ENST00000489304 WASHC2AQ641Q2 1341 aa25.31■■□□□ 1.64
CD40-206ENST00000489304 RPGRIP1LQ68CZ1 1315 aa25.3■■□□□ 1.64
CD40-206ENST00000489304 MYO5BQ9ULV0 1848 aa25.29■■□□□ 1.64
CD40-206ENST00000489304 NEXMIFQ5QGS0 1516 aa25.29■■□□□ 1.64
CD40-206ENST00000489304 C3P01024 1663 aa25.28■■□□□ 1.64
CD40-206ENST00000489304 CCDC7Q96M83 1385 aa25.28■■□□□ 1.64
CD40-206ENST00000489304 STAG3Q9UJ98 1225 aa25.27■■□□□ 1.64
CD40-206ENST00000489304 NRXN1Q9ULB1 1477 aa25.27■■□□□ 1.64
CD40-206ENST00000489304 C11orf95C9JLR9 678 aaPredicted RBP25.26■■□□□ 1.63
CD40-206ENST00000489304 CFAP70Q5T0N1 1121 aa25.26■■□□□ 1.63
CD40-206ENST00000489304 A2ML1A8K2U0 1454 aa25.25■■□□□ 1.63
CD40-206ENST00000489304 ADAMTSL3P82987 1691 aa25.23■■□□□ 1.63
CD40-206ENST00000489304 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
CD40-206ENST00000489304 IQGAP1P46940 1657 aa25.23■■□□□ 1.63
CD40-206ENST00000489304 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.63
CD40-206ENST00000489304 KIF7Q2M1P5 1343 aa25.2■■□□□ 1.62
CD40-206ENST00000489304 PIK3C2GO75747 1445 aa25.2■■□□□ 1.62
CD40-206ENST00000489304 ST20-MTHFSA0A0A6YYL1 179 aa25.19■■□□□ 1.62
CD40-206ENST00000489304 VGFO15240 615 aaPredicted RBP25.19■■□□□ 1.62
CD40-206ENST00000489304 ZFYVE9O95405 1425 aa25.16■■□□□ 1.62
CD40-206ENST00000489304 RIMS2Q9UQ26 1411 aa25.16■■□□□ 1.62
CD40-206ENST00000489304 C14orf93Q9H972 538 aaKnown RBP25.15■■□□□ 1.62
CD40-206ENST00000489304 NLRP1Q9C000 1473 aa25.13■■□□□ 1.61
CD40-206ENST00000489304 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
CD40-206ENST00000489304 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
CD40-206ENST00000489304 UBR1Q8IWV7 1749 aa25.11■■□□□ 1.61
CD40-206ENST00000489304 TMEM132EQ6IEE7 984 aa25.1■■□□□ 1.61
CD40-206ENST00000489304 TESK2Q96S53 571 aa25.07■■□□□ 1.6
CD40-206ENST00000489304 ADGRB1O14514 1584 aa25.07■■□□□ 1.6
CD40-206ENST00000489304 TMEM2Q9UHN6 1383 aa25.06■■□□□ 1.6
CD40-206ENST00000489304 ANP32CO43423 234 aa25.06■■□□□ 1.6
CD40-206ENST00000489304 KDM5AP29375 1690 aaKnown RBP25.05■■□□□ 1.6
CD40-206ENST00000489304 MYO3AQ8NEV4 1616 aa25.05■■□□□ 1.6
CD40-206ENST00000489304 EIF3AQ14152 1382 aaKnown RBP25.04■■□□□ 1.6
CD40-206ENST00000489304 ASXL1Q8IXJ9 1541 aa25.03■■□□□ 1.6
CD40-206ENST00000489304 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
CD40-206ENST00000489304 PTPRMP28827 1452 aa25.02■■□□□ 1.6
CD40-206ENST00000489304 POLR3GLQ9BT43 218 aa25.01■■□□□ 1.59
CD40-206ENST00000489304 TRAK1Q9UPV9 953 aa25.01■■□□□ 1.59
CD40-206ENST00000489304 LTKP29376 864 aa25■■□□□ 1.59
CD40-206ENST00000489304 ALKQ9UM73 1620 aa25■■□□□ 1.59
CD40-206ENST00000489304 DISP3Q9P2K9 1392 aa24.98■■□□□ 1.59
CD40-206ENST00000489304 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
CD40-206ENST00000489304 HDGFP51858 240 aaKnown RBP24.97■■□□□ 1.59
CD40-206ENST00000489304 TMF1P82094 1093 aa24.97■■□□□ 1.59
CD40-206ENST00000489304 ARHGAP23Q9P227 1491 aa24.96■■□□□ 1.59
CD40-206ENST00000489304 CCER2I3L3R5 266 aa24.96■■□□□ 1.59
CD40-206ENST00000489304 TXNDC2Q86VQ3 553 aa24.96■■□□□ 1.59
CD40-206ENST00000489304 THEMISQ8N1K5 641 aaPredicted RBP24.96■■□□□ 1.59
CD40-206ENST00000489304 NRXN3Q9Y4C0 1643 aa24.96■■□□□ 1.59
CD40-206ENST00000489304 STK26Q9P289 416 aa24.95■■□□□ 1.59
CD40-206ENST00000489304 SLIT1O75093 1534 aa24.95■■□□□ 1.58
CD40-206ENST00000489304 SLC24A1O60721 1099 aa24.92■■□□□ 1.58
CD40-206ENST00000489304 BCANQ96GW7 911 aa24.92■■□□□ 1.58
CD40-206ENST00000489304 SETD1AO15047 1707 aaKnown RBP24.91■■□□□ 1.58
CD40-206ENST00000489304 SBNO2Q9Y2G9 1366 aa24.91■■□□□ 1.58
CD40-206ENST00000489304 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
CD40-206ENST00000489304 CENPJQ9HC77 1338 aaPredicted RBP24.9■■□□□ 1.58
CD40-206ENST00000489304 YTHDC2Q9H6S0 1430 aaKnown RBP24.9■■□□□ 1.58
CD40-206ENST00000489304 ARHGEF28Q8N1W1 1705 aaKnown RBP24.9■■□□□ 1.58
CD40-206ENST00000489304 KDM4FA0A1W2PPD8 638 aa24.89■■□□□ 1.58
CD40-206ENST00000489304 METP08581 1390 aa24.89■■□□□ 1.58
CD40-206ENST00000489304 PLEKHG1Q9ULL1 1385 aa24.89■■□□□ 1.58
CD40-206ENST00000489304 QRICH2Q9H0J4 1663 aa24.88■■□□□ 1.57
CD40-206ENST00000489304 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
CD40-206ENST00000489304 ADAMTS13Q76LX8 1427 aa24.88■■□□□ 1.57
CD40-206ENST00000489304 CDCA8Q53HL2 280 aa24.87■■□□□ 1.57
CD40-206ENST00000489304 PRKRIP1Q9H875 184 aaPredicted RBP24.86■■□□□ 1.57
CD40-206ENST00000489304 SAFB2Q14151 953 aaKnown RBP eCLIP24.83■■□□□ 1.57
CD40-206ENST00000489304 SLC26A8Q96RN1 970 aa24.83■■□□□ 1.57
CD40-206ENST00000489304 SETD1BQ9UPS6 1966 aaKnown RBP24.83■■□□□ 1.57
CD40-206ENST00000489304 LRPPRCP42704 1394 aaKnown RBP24.83■■□□□ 1.57
CD40-206ENST00000489304 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
CD40-206ENST00000489304 PRAM1Q96QH2 718 aa24.81■■□□□ 1.56
CD40-206ENST00000489304 MYOM1P52179 1685 aa24.81■■□□□ 1.56
CD40-206ENST00000489304 MED14O60244 1454 aa24.81■■□□□ 1.56
CD40-206ENST00000489304 ABCC11Q96J66 1382 aa24.78■■□□□ 1.56
CD40-206ENST00000489304 WAPLQ7Z5K2 1190 aa24.78■■□□□ 1.56
CD40-206ENST00000489304 PLEKHH1Q9ULM0 1364 aa24.77■■□□□ 1.56
CD40-206ENST00000489304 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
CD40-206ENST00000489304 ANKLE2Q86XL3 938 aa24.77■■□□□ 1.56
CD40-206ENST00000489304 POGKQ9P215 609 aa24.77■■□□□ 1.56
CD40-206ENST00000489304 DLC1Q96QB1 1528 aa24.75■■□□□ 1.55
CD40-206ENST00000489304 PTPRUQ92729 1446 aa24.75■■□□□ 1.55
CD40-206ENST00000489304 PER1O15534 1290 aaPredicted RBP24.75■■□□□ 1.55
CD40-206ENST00000489304 TBX22Q9Y458 520 aa24.75■■□□□ 1.55
CD40-206ENST00000489304 MINK1Q8N4C8 1332 aaPredicted RBP24.74■■□□□ 1.55
CD40-206ENST00000489304 KTN1Q86UP2 1357 aaKnown RBP24.74■■□□□ 1.55
CD40-206ENST00000489304 PANK3Q9H999 370 aa24.73■■□□□ 1.55
CD40-206ENST00000489304 TULP4Q9NRJ4 1543 aa24.73■■□□□ 1.55
CD40-206ENST00000489304 NCKAP5LQ9HCH0 1330 aa24.71■■□□□ 1.55
CD40-206ENST00000489304 PUS7Q96PZ0 661 aaKnown RBP24.69■■□□□ 1.54
CD40-206ENST00000489304 TECPR2O15040 1411 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms