RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
RFC4-213ENST00000489028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.06□□□□□ -0.96
RFC4-213ENST00000489028 RNF40O75150 1001 aa9.04□□□□□ -0.96
RFC4-213ENST00000489028 KRI1Q8N9T8 703 aaKnown RBP9.04□□□□□ -0.96
RFC4-213ENST00000489028 TSR3Q9UJK0 312 aaKnown RBP9.04□□□□□ -0.96
RFC4-213ENST00000489028 SLC10A3P09131 477 aa9.01□□□□□ -0.97
RFC4-213ENST00000489028 HDGFP51858 240 aaKnown RBP9.01□□□□□ -0.97
RFC4-213ENST00000489028 SLF2Q8IX21 1173 aa9.01□□□□□ -0.97
RFC4-213ENST00000489028 SLC24A3Q9HC58 644 aa9.01□□□□□ -0.97
RFC4-213ENST00000489028 PPP4CP60510 307 aa9□□□□□ -0.97
RFC4-213ENST00000489028 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
RFC4-213ENST00000489028 APLP1P51693 650 aa8.99□□□□□ -0.97
RFC4-213ENST00000489028 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
RFC4-213ENST00000489028 TMUB1Q9BVT8 246 aa8.98□□□□□ -0.97
RFC4-213ENST00000489028 REPIN1Q9BWE0 567 aaKnown RBP8.98□□□□□ -0.97
RFC4-213ENST00000489028 TRIM66O15016 1216 aa8.97□□□□□ -0.97
RFC4-213ENST00000489028 AK7Q96M32 723 aa8.96□□□□□ -0.98
RFC4-213ENST00000489028 DDX11L8A8MPP1 907 aa8.95□□□□□ -0.98
RFC4-213ENST00000489028 CFHP08603 1231 aa8.95□□□□□ -0.98
RFC4-213ENST00000489028 AMHR2Q16671 573 aa8.95□□□□□ -0.98
RFC4-213ENST00000489028 NYAP1Q6ZVC0 841 aa8.95□□□□□ -0.98
RFC4-213ENST00000489028 SLC4A3P48751 1232 aa8.93□□□□□ -0.98
RFC4-213ENST00000489028 TPRNQ4KMQ1 711 aa8.93□□□□□ -0.98
RFC4-213ENST00000489028 GPCPD1Q9NPB8 672 aa8.93□□□□□ -0.98
RFC4-213ENST00000489028 CLCN1P35523 988 aa8.92□□□□□ -0.98
RFC4-213ENST00000489028 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
RFC4-213ENST00000489028 RDH13Q8NBN7 331 aa8.92□□□□□ -0.98
RFC4-213ENST00000489028 FAM217BQ9NTX9 383 aaPredicted RBP8.92□□□□□ -0.98
RFC4-213ENST00000489028 CD46P15529 392 aa8.91□□□□□ -0.98
RFC4-213ENST00000489028 TTLL12Q14166 644 aaPredicted RBP8.91□□□□□ -0.98
RFC4-213ENST00000489028 ITGBL1O95965 494 aaPredicted RBP8.9□□□□□ -0.98
RFC4-213ENST00000489028 PDE4DQ08499 809 aa8.9□□□□□ -0.98
RFC4-213ENST00000489028 TJAP1Q5JTD0 557 aa8.9□□□□□ -0.98
RFC4-213ENST00000489028 SULF1Q8IWU6 871 aa8.9□□□□□ -0.98
RFC4-213ENST00000489028 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
RFC4-213ENST00000489028 PLA2G2EQ9NZK7 142 aa8.9□□□□□ -0.98
RFC4-213ENST00000489028 ACTN4O43707 911 aaKnown RBP8.89□□□□□ -0.99
RFC4-213ENST00000489028 GIGYF2Q6Y7W6 1299 aaKnown RBP8.89□□□□□ -0.99
RFC4-213ENST00000489028 MTRQ99707 1265 aa8.89□□□□□ -0.99
RFC4-213ENST00000489028 GCGRP47871 477 aa8.88□□□□□ -0.99
RFC4-213ENST00000489028 KMT5BQ4FZB7 885 aa8.88□□□□□ -0.99
RFC4-213ENST00000489028 PRKCSHP14314 528 aaPredicted RBP8.87□□□□□ -0.99
RFC4-213ENST00000489028 COPS2P61201 443 aa8.87□□□□□ -0.99
RFC4-213ENST00000489028 BLOC1S3Q6QNY0 202 aa8.87□□□□□ -0.99
RFC4-213ENST00000489028 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
RFC4-213ENST00000489028 SSTR3P32745 418 aaPredicted RBP8.86□□□□□ -0.99
RFC4-213ENST00000489028 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
RFC4-213ENST00000489028 PRR14Q9BWN1 585 aa8.86□□□□□ -0.99
RFC4-213ENST00000489028 PCDHB3Q9Y5E6 796 aa8.86□□□□□ -0.99
RFC4-213ENST00000489028 MS4A1P11836 297 aa8.85□□□□□ -0.99
RFC4-213ENST00000489028 FUT2Q10981 343 aa8.85□□□□□ -0.99
RFC4-213ENST00000489028 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
RFC4-213ENST00000489028 IL21Q9HBE4 155 aa8.84□□□□□ -0.99
RFC4-213ENST00000489028 KCNC4Q03721 635 aa8.83□□□□□ -1
RFC4-213ENST00000489028 IFFO2Q5TF58 517 aa8.82□□□□□ -1
RFC4-213ENST00000489028 NKX2-3Q8TAU0 364 aa8.82□□□□□ -1
RFC4-213ENST00000489028 HLA-CQ95604 372 aa8.82□□□□□ -1
RFC4-213ENST00000489028 GPBP1L1Q9HC44 474 aaPredicted RBP8.82□□□□□ -1
RFC4-213ENST00000489028 TLL1O43897 1013 aa8.81□□□□□ -1
RFC4-213ENST00000489028 MORN1Q5T089 497 aa8.81□□□□□ -1
RFC4-213ENST00000489028 KDM4AO75164 1064 aa8.8□□□□□ -1
RFC4-213ENST00000489028 ZPR1O75312 459 aa8.8□□□□□ -1
RFC4-213ENST00000489028 ATP6V1AP38606 617 aa8.8□□□□□ -1
RFC4-213ENST00000489028 BEGAINQ9BUH8 593 aa8.8□□□□□ -1
RFC4-213ENST00000489028 HOXA2O43364 376 aa8.78□□□□□ -1
RFC4-213ENST00000489028 SCUBE3Q8IX30 993 aa8.78□□□□□ -1
RFC4-213ENST00000489028 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
RFC4-213ENST00000489028 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
RFC4-213ENST00000489028 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
RFC4-213ENST00000489028 A0A0G2JS52 829 aa8.77□□□□□ -1.01
RFC4-213ENST00000489028 GUCA2AQ02747 115 aa8.77□□□□□ -1.01
RFC4-213ENST00000489028 NR1I2O75469 434 aa8.76□□□□□ -1.01
RFC4-213ENST00000489028 NUTM1Q86Y26 1132 aa8.76□□□□□ -1.01
RFC4-213ENST00000489028 USP46P62068 366 aa8.75□□□□□ -1.01
RFC4-213ENST00000489028 THAP11Q96EK4 314 aa8.75□□□□□ -1.01
RFC4-213ENST00000489028 NDUFV2P19404 249 aa8.74□□□□□ -1.01
RFC4-213ENST00000489028 BRPF1P55201 1214 aaPredicted RBP8.74□□□□□ -1.01
RFC4-213ENST00000489028 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
RFC4-213ENST00000489028 TBC1D2Q9BYX2 928 aa8.74□□□□□ -1.01
RFC4-213ENST00000489028 MOXD2PA6NHM9 499 aa8.73□□□□□ -1.01
RFC4-213ENST00000489028 FAM117AQ9C073 453 aa8.73□□□□□ -1.01
RFC4-213ENST00000489028 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
RFC4-213ENST00000489028 ADH1BP00325 375 aa8.72□□□□□ -1.01
RFC4-213ENST00000489028 GRIPAP1Q4V328 841 aa8.72□□□□□ -1.01
RFC4-213ENST00000489028 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
RFC4-213ENST00000489028 NEUROD2Q15784 382 aa8.71□□□□□ -1.02
RFC4-213ENST00000489028 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
RFC4-213ENST00000489028 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
RFC4-213ENST00000489028 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
RFC4-213ENST00000489028 SYMPKQ92797 1274 aaKnown RBP8.7□□□□□ -1.02
RFC4-213ENST00000489028 SPSB2Q99619 263 aa8.7□□□□□ -1.02
RFC4-213ENST00000489028 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
RFC4-213ENST00000489028 S1PR4O95977 384 aa8.69□□□□□ -1.02
RFC4-213ENST00000489028 FDX1P10109 184 aa8.69□□□□□ -1.02
RFC4-213ENST00000489028 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
RFC4-213ENST00000489028 RSBN1LQ6PCB5 846 aaPredicted RBP8.69□□□□□ -1.02
RFC4-213ENST00000489028 PRDM9Q9NQV7 894 aa8.69□□□□□ -1.02
RFC4-213ENST00000489028 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
RFC4-213ENST00000489028 PPEF1O14829 653 aaPredicted RBP8.67□□□□□ -1.02
RFC4-213ENST00000489028 Q3C1V9 767 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms