RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
ERGIC3-217ENST00000488935 KCNA6P17658 529 aa24.47■■□□□ 1.51
ERGIC3-217ENST00000488935 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
ERGIC3-217ENST00000488935 PHF23Q9BUL5 403 aaPredicted RBP24.44■■□□□ 1.5
ERGIC3-217ENST00000488935 E9PCH4 1651 aa24.43■■□□□ 1.5
ERGIC3-217ENST00000488935 UNC13BO14795 1591 aa24.42■■□□□ 1.5
ERGIC3-217ENST00000488935 PPP1R15AO75807 674 aaPredicted RBP24.42■■□□□ 1.5
ERGIC3-217ENST00000488935 RIMS2Q9UQ26 1411 aa24.42■■□□□ 1.5
ERGIC3-217ENST00000488935 RPRD2Q5VT52 1461 aaKnown RBP24.41■■□□□ 1.5
ERGIC3-217ENST00000488935 TMEM131LA2VDJ0 1609 aa24.4■■□□□ 1.5
ERGIC3-217ENST00000488935 ZFYVE9O95405 1425 aa24.4■■□□□ 1.5
ERGIC3-217ENST00000488935 NUP155O75694 1391 aa24.38■■□□□ 1.49
ERGIC3-217ENST00000488935 ROCK1Q13464 1354 aa24.36■■□□□ 1.49
ERGIC3-217ENST00000488935 PLEKHG1Q9ULL1 1385 aa24.34■■□□□ 1.49
ERGIC3-217ENST00000488935 IQGAP3Q86VI3 1631 aa24.34■■□□□ 1.49
ERGIC3-217ENST00000488935 CHD2O14647 1828 aaKnown RBP24.33■■□□□ 1.49
ERGIC3-217ENST00000488935 ROBO1Q9Y6N7 1651 aa24.33■■□□□ 1.49
ERGIC3-217ENST00000488935 NWD1Q149M9 1564 aa24.33■■□□□ 1.48
ERGIC3-217ENST00000488935 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
ERGIC3-217ENST00000488935 RGS17Q9UGC6 210 aaPredicted RBP24.31■■□□□ 1.48
ERGIC3-217ENST00000488935 NKTRP30414 1462 aaKnown RBP24.28■■□□□ 1.48
ERGIC3-217ENST00000488935 HDGFP51858 240 aaKnown RBP24.28■■□□□ 1.48
ERGIC3-217ENST00000488935 MSH6P52701 1360 aa24.28■■□□□ 1.48
ERGIC3-217ENST00000488935 TBX22Q9Y458 520 aa24.27■■□□□ 1.48
ERGIC3-217ENST00000488935 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
ERGIC3-217ENST00000488935 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.26■■□□□ 1.47
ERGIC3-217ENST00000488935 SLAIN2Q9P270 581 aa24.26■■□□□ 1.47
ERGIC3-217ENST00000488935 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
ERGIC3-217ENST00000488935 ZNF326Q5BKZ1 582 aaKnown RBP24.21■■□□□ 1.47
ERGIC3-217ENST00000488935 PTPRUQ92729 1446 aa24.2■■□□□ 1.46
ERGIC3-217ENST00000488935 PHLPP1O60346 1717 aa24.19■■□□□ 1.46
ERGIC3-217ENST00000488935 AMOTL2Q9Y2J4 779 aa24.19■■□□□ 1.46
ERGIC3-217ENST00000488935 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
ERGIC3-217ENST00000488935 POTEAQ6S8J7 498 aa24.18■■□□□ 1.46
ERGIC3-217ENST00000488935 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
ERGIC3-217ENST00000488935 NRXN3Q9Y4C0 1643 aa24.13■■□□□ 1.45
ERGIC3-217ENST00000488935 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
ERGIC3-217ENST00000488935 TRIM52Q96A61 297 aa24.12■■□□□ 1.45
ERGIC3-217ENST00000488935 CLTCL1P53675 1640 aa24.12■■□□□ 1.45
ERGIC3-217ENST00000488935 DIP2AQ14689 1571 aa24.12■■□□□ 1.45
ERGIC3-217ENST00000488935 NAIPQ13075 1403 aa24.11■■□□□ 1.45
ERGIC3-217ENST00000488935 TRPM2O94759 1503 aa24.11■■□□□ 1.45
ERGIC3-217ENST00000488935 ATF3P18847 181 aa24.11■■□□□ 1.45
ERGIC3-217ENST00000488935 C19orf44Q9H6X5 657 aa24.11■■□□□ 1.45
ERGIC3-217ENST00000488935 METP08581 1390 aa24.09■■□□□ 1.45
ERGIC3-217ENST00000488935 PIK3R4Q99570 1358 aa24.08■■□□□ 1.45
ERGIC3-217ENST00000488935 COL16A1Q07092 1604 aaPredicted RBP24.08■■□□□ 1.45
ERGIC3-217ENST00000488935 CADPS2Q86UW7 1296 aa24.07■■□□□ 1.44
ERGIC3-217ENST00000488935 JCADQ9P266 1359 aa24.06■■□□□ 1.44
ERGIC3-217ENST00000488935 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
ERGIC3-217ENST00000488935 FOXD1Q16676 465 aa24.04■■□□□ 1.44
ERGIC3-217ENST00000488935 NEXMIFQ5QGS0 1516 aa24.04■■□□□ 1.44
ERGIC3-217ENST00000488935 SETBP1Q9Y6X0 1596 aa24.03■■□□□ 1.44
ERGIC3-217ENST00000488935 BRINP3Q76B58 766 aa24.03■■□□□ 1.44
ERGIC3-217ENST00000488935 XRN1Q8IZH2 1706 aaKnown RBP24.03■■□□□ 1.44
ERGIC3-217ENST00000488935 KIF1BO60333 1816 aa24.03■■□□□ 1.44
ERGIC3-217ENST00000488935 DDX17Q92841 729 aaKnown RBP24.02■■□□□ 1.44
ERGIC3-217ENST00000488935 LRP6O75581 1613 aa24.02■■□□□ 1.44
ERGIC3-217ENST00000488935 NUTM2BA6NNL0 878 aaPredicted RBP23.99■■□□□ 1.43
ERGIC3-217ENST00000488935 NUTM2EB1AL46 878 aaPredicted RBP23.99■■□□□ 1.43
ERGIC3-217ENST00000488935 NUTM2AQ8IVF1 878 aaPredicted RBP23.99■■□□□ 1.43
ERGIC3-217ENST00000488935 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
ERGIC3-217ENST00000488935 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
ERGIC3-217ENST00000488935 MEX3CQ5U5Q3 659 aaKnown RBP23.98■■□□□ 1.43
ERGIC3-217ENST00000488935 AHDC1Q5TGY3 1603 aaPredicted RBP23.97■■□□□ 1.43
ERGIC3-217ENST00000488935 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
ERGIC3-217ENST00000488935 MST1RQ04912 1400 aa23.94■■□□□ 1.42
ERGIC3-217ENST00000488935 ASXL1Q8IXJ9 1541 aa23.93■■□□□ 1.42
ERGIC3-217ENST00000488935 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
ERGIC3-217ENST00000488935 SPATA31A6Q5VVP1 1343 aa23.9■■□□□ 1.42
ERGIC3-217ENST00000488935 SHPRHQ149N8 1683 aa23.9■■□□□ 1.42
ERGIC3-217ENST00000488935 ADGRL3Q9HAR2 1447 aa23.89■■□□□ 1.41
ERGIC3-217ENST00000488935 ROBO2Q9HCK4 1378 aa23.89■■□□□ 1.41
ERGIC3-217ENST00000488935 DCCP43146 1447 aa23.88■■□□□ 1.41
ERGIC3-217ENST00000488935 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
ERGIC3-217ENST00000488935 RGL3Q3MIN7 710 aa23.87■■□□□ 1.41
ERGIC3-217ENST00000488935 PPLO60437 1756 aa23.86■■□□□ 1.41
ERGIC3-217ENST00000488935 NHSL1Q5SYE7 1610 aa23.85■■□□□ 1.41
ERGIC3-217ENST00000488935 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
ERGIC3-217ENST00000488935 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.4
ERGIC3-217ENST00000488935 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
ERGIC3-217ENST00000488935 ZNF772Q68DY9 489 aaPredicted RBP23.81■■□□□ 1.4
ERGIC3-217ENST00000488935 STK26Q9P289 416 aa23.81■■□□□ 1.4
ERGIC3-217ENST00000488935 SETD5Q9C0A6 1442 aa23.81■■□□□ 1.4
ERGIC3-217ENST00000488935 RPGRIP1LQ68CZ1 1315 aa23.81■■□□□ 1.4
ERGIC3-217ENST00000488935 LRRC59Q96AG4 307 aaKnown RBP23.8■■□□□ 1.4
ERGIC3-217ENST00000488935 MPHOSPH9Q99550 1183 aa23.8■■□□□ 1.4
ERGIC3-217ENST00000488935 AFF2P51816 1311 aa23.8■■□□□ 1.4
ERGIC3-217ENST00000488935 C8orf37Q96NL8 207 aa23.79■■□□□ 1.4
ERGIC3-217ENST00000488935 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
ERGIC3-217ENST00000488935 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
ERGIC3-217ENST00000488935 NUTM2FA1L443 756 aa23.77■■□□□ 1.4
ERGIC3-217ENST00000488935 ADAMTS2O95450 1211 aa23.77■■□□□ 1.4
ERGIC3-217ENST00000488935 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
ERGIC3-217ENST00000488935 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
ERGIC3-217ENST00000488935 RXRBP28702 533 aa23.75■■□□□ 1.39
ERGIC3-217ENST00000488935 CCDC144AA2RUR9 1427 aa23.75■■□□□ 1.39
ERGIC3-217ENST00000488935 XPCQ01831 940 aaPredicted RBP23.72■■□□□ 1.39
ERGIC3-217ENST00000488935 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
ERGIC3-217ENST00000488935 PLEKHH1Q9ULM0 1364 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms