RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CARD11Q9BXL7 1154 aa15.42■□□□□ 0.06
COL21A1-211ENST00000488912 NRXN1Q9ULB1 1477 aa15.42■□□□□ 0.06
COL21A1-211ENST00000488912 ADGRF5Q8IZF2 1346 aa15.42■□□□□ 0.06
COL21A1-211ENST00000488912 NBPF1Q3BBV0 1214 aa15.42■□□□□ 0.06
COL21A1-211ENST00000488912 DIEXFQ68CQ4 756 aaKnown RBP15.42■□□□□ 0.06
COL21A1-211ENST00000488912 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
COL21A1-211ENST00000488912 GPRASP1Q5JY77 1395 aa15.41■□□□□ 0.06
COL21A1-211ENST00000488912 RIMS1Q86UR5 1692 aaKnown RBP15.41■□□□□ 0.06
COL21A1-211ENST00000488912 RPGRIP1LQ68CZ1 1315 aa15.41■□□□□ 0.06
COL21A1-211ENST00000488912 TNRQ92752 1358 aa15.41■□□□□ 0.06
COL21A1-211ENST00000488912 ADAMTSL3P82987 1691 aa15.41■□□□□ 0.06
COL21A1-211ENST00000488912 CEBPAP49715 358 aaPredicted RBP15.4■□□□□ 0.06
COL21A1-211ENST00000488912 A2ML1A8K2U0 1454 aa15.38■□□□□ 0.05
COL21A1-211ENST00000488912 PIK3C2GO75747 1445 aa15.38■□□□□ 0.05
COL21A1-211ENST00000488912 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
COL21A1-211ENST00000488912 NUTM2DQ5VT03 806 aaPredicted RBP15.37■□□□□ 0.05
COL21A1-211ENST00000488912 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
COL21A1-211ENST00000488912 POLR1AO95602 1720 aaPredicted RBP15.36■□□□□ 0.05
COL21A1-211ENST00000488912 UBR1Q8IWV7 1749 aa15.36■□□□□ 0.05
COL21A1-211ENST00000488912 IQGAP1P46940 1657 aa15.36■□□□□ 0.05
COL21A1-211ENST00000488912 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
COL21A1-211ENST00000488912 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
COL21A1-211ENST00000488912 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
COL21A1-211ENST00000488912 NLRP1Q9C000 1473 aa15.34■□□□□ 0.05
COL21A1-211ENST00000488912 VGFO15240 615 aaPredicted RBP15.34■□□□□ 0.05
COL21A1-211ENST00000488912 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.04
COL21A1-211ENST00000488912 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
COL21A1-211ENST00000488912 SETBP1Q9Y6X0 1596 aa15.32■□□□□ 0.04
COL21A1-211ENST00000488912 WASHC2AQ641Q2 1341 aa15.32■□□□□ 0.04
COL21A1-211ENST00000488912 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
COL21A1-211ENST00000488912 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
COL21A1-211ENST00000488912 SCAF11Q99590 1463 aaKnown RBP15.31■□□□□ 0.04
COL21A1-211ENST00000488912 ADGRB1O14514 1584 aa15.3■□□□□ 0.04
COL21A1-211ENST00000488912 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
COL21A1-211ENST00000488912 DDX10Q13206 875 aaKnown RBP15.29■□□□□ 0.04
COL21A1-211ENST00000488912 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
COL21A1-211ENST00000488912 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
COL21A1-211ENST00000488912 KIF7Q2M1P5 1343 aa15.27■□□□□ 0.04
COL21A1-211ENST00000488912 TMEM2Q9UHN6 1383 aa15.27■□□□□ 0.03
COL21A1-211ENST00000488912 ASXL1Q8IXJ9 1541 aa15.26■□□□□ 0.03
COL21A1-211ENST00000488912 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
COL21A1-211ENST00000488912 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
COL21A1-211ENST00000488912 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
COL21A1-211ENST00000488912 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
COL21A1-211ENST00000488912 SETD1AO15047 1707 aaKnown RBP15.25■□□□□ 0.03
COL21A1-211ENST00000488912 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
COL21A1-211ENST00000488912 PTPRMP28827 1452 aa15.24■□□□□ 0.03
COL21A1-211ENST00000488912 SETD1BQ9UPS6 1966 aaKnown RBP15.24■□□□□ 0.03
COL21A1-211ENST00000488912 TESK2Q96S53 571 aa15.24■□□□□ 0.03
COL21A1-211ENST00000488912 ZNF142P52746 1687 aaPredicted RBP15.24■□□□□ 0.03
COL21A1-211ENST00000488912 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL21A1-211ENST00000488912 SLIT1O75093 1534 aa15.23■□□□□ 0.03
COL21A1-211ENST00000488912 ARHGEF28Q8N1W1 1705 aaKnown RBP15.22■□□□□ 0.03
COL21A1-211ENST00000488912 ARHGAP23Q9P227 1491 aa15.22■□□□□ 0.03
COL21A1-211ENST00000488912 DISP3Q9P2K9 1392 aa15.21■□□□□ 0.03
COL21A1-211ENST00000488912 HDGFP51858 240 aaKnown RBP15.21■□□□□ 0.02
COL21A1-211ENST00000488912 MIER1Q8N108 512 aa15.2■□□□□ 0.02
COL21A1-211ENST00000488912 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
COL21A1-211ENST00000488912 QRICH2Q9H0J4 1663 aa15.2■□□□□ 0.02
COL21A1-211ENST00000488912 POLR3GLQ9BT43 218 aa15.2■□□□□ 0.02
COL21A1-211ENST00000488912 LTKP29376 864 aa15.19■□□□□ 0.02
COL21A1-211ENST00000488912 THEMISQ8N1K5 641 aaPredicted RBP15.18■□□□□ 0.02
COL21A1-211ENST00000488912 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
COL21A1-211ENST00000488912 PLEKHG1Q9ULL1 1385 aa15.17■□□□□ 0.02
COL21A1-211ENST00000488912 TMF1P82094 1093 aa15.17■□□□□ 0.02
COL21A1-211ENST00000488912 TXNDC2Q86VQ3 553 aa15.17■□□□□ 0.02
COL21A1-211ENST00000488912 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
COL21A1-211ENST00000488912 EID1Q9Y6B2 187 aa15.16■□□□□ 0.02
COL21A1-211ENST00000488912 STK26Q9P289 416 aa15.15■□□□□ 0.02
COL21A1-211ENST00000488912 ADAMTS13Q76LX8 1427 aa15.15■□□□□ 0.02
COL21A1-211ENST00000488912 SBNO2Q9Y2G9 1366 aa15.15■□□□□ 0.02
COL21A1-211ENST00000488912 METP08581 1390 aa15.14■□□□□ 0.01
COL21A1-211ENST00000488912 BCANQ96GW7 911 aa15.14■□□□□ 0.01
COL21A1-211ENST00000488912 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
COL21A1-211ENST00000488912 LRPPRCP42704 1394 aaKnown RBP15.12■□□□□ 0.01
COL21A1-211ENST00000488912 MED14O60244 1454 aa15.12■□□□□ 0.01
COL21A1-211ENST00000488912 MYOM1P52179 1685 aa15.11■□□□□ 0.01
COL21A1-211ENST00000488912 DLC1Q96QB1 1528 aa15.11■□□□□ 0.01
COL21A1-211ENST00000488912 KDM4FA0A1W2PPD8 638 aa15.1■□□□□ 0.01
COL21A1-211ENST00000488912 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
COL21A1-211ENST00000488912 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
COL21A1-211ENST00000488912 DIP2AQ14689 1571 aa15.09■□□□□ 0.01
COL21A1-211ENST00000488912 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
COL21A1-211ENST00000488912 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL21A1-211ENST00000488912 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
COL21A1-211ENST00000488912 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
COL21A1-211ENST00000488912 TULP4Q9NRJ4 1543 aa15.08■□□□□ 0.01
COL21A1-211ENST00000488912 ANP32CO43423 234 aa15.08■□□□□ 0
COL21A1-211ENST00000488912 CPS1P31327 1500 aa15.08■□□□□ 0
COL21A1-211ENST00000488912 TECPR2O15040 1411 aa15.07■□□□□ 0
COL21A1-211ENST00000488912 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
COL21A1-211ENST00000488912 POGKQ9P215 609 aa15.06■□□□□ 0
COL21A1-211ENST00000488912 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
COL21A1-211ENST00000488912 PTPRUQ92729 1446 aa15.05■□□□□ -0
COL21A1-211ENST00000488912 TBX22Q9Y458 520 aa15.05■□□□□ -0
COL21A1-211ENST00000488912 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
COL21A1-211ENST00000488912 MINK1Q8N4C8 1332 aaPredicted RBP15.04■□□□□ -0
COL21A1-211ENST00000488912 EVC2Q86UK5 1308 aa15.03■□□□□ -0
COL21A1-211ENST00000488912 FAM135BQ49AJ0 1406 aa15.03■□□□□ -0
COL21A1-211ENST00000488912 XRN1Q8IZH2 1706 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms