RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 ADGRF5Q8IZF2 1346 aa18.53■□□□□ 0.56
CHD1L-208ENST00000488864 MYO5BQ9ULV0 1848 aa18.52■□□□□ 0.56
CHD1L-208ENST00000488864 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.56
CHD1L-208ENST00000488864 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
CHD1L-208ENST00000488864 UHRF1BP1Q6BDS2 1440 aa18.51■□□□□ 0.55
CHD1L-208ENST00000488864 FKBP8Q14318 412 aa18.51■□□□□ 0.55
CHD1L-208ENST00000488864 NBPF1Q3BBV0 1214 aa18.5■□□□□ 0.55
CHD1L-208ENST00000488864 NEURL4Q96JN8 1562 aa18.49■□□□□ 0.55
CHD1L-208ENST00000488864 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
CHD1L-208ENST00000488864 A2ML1A8K2U0 1454 aa18.49■□□□□ 0.55
CHD1L-208ENST00000488864 PTPRMP28827 1452 aa18.48■□□□□ 0.55
CHD1L-208ENST00000488864 RPGRIP1LQ68CZ1 1315 aa18.47■□□□□ 0.55
CHD1L-208ENST00000488864 KDM4FA0A1W2PPD8 638 aa18.47■□□□□ 0.55
CHD1L-208ENST00000488864 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
CHD1L-208ENST00000488864 NEXMIFQ5QGS0 1516 aa18.46■□□□□ 0.55
CHD1L-208ENST00000488864 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
CHD1L-208ENST00000488864 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
CHD1L-208ENST00000488864 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
CHD1L-208ENST00000488864 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
CHD1L-208ENST00000488864 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
CHD1L-208ENST00000488864 IFT172Q9UG01 1749 aa18.44■□□□□ 0.54
CHD1L-208ENST00000488864 PPLO60437 1756 aa18.44■□□□□ 0.54
CHD1L-208ENST00000488864 MYOM2P54296 1465 aa18.43■□□□□ 0.54
CHD1L-208ENST00000488864 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
CHD1L-208ENST00000488864 RIMS2Q9UQ26 1411 aa18.42■□□□□ 0.54
CHD1L-208ENST00000488864 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
CHD1L-208ENST00000488864 EIF4G2P78344 907 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHD1L-208ENST00000488864 UBR1Q8IWV7 1749 aa18.41■□□□□ 0.54
CHD1L-208ENST00000488864 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
CHD1L-208ENST00000488864 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
CHD1L-208ENST00000488864 TMEM2Q9UHN6 1383 aa18.39■□□□□ 0.54
CHD1L-208ENST00000488864 PIK3C2GO75747 1445 aa18.39■□□□□ 0.54
CHD1L-208ENST00000488864 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.53
CHD1L-208ENST00000488864 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.53
CHD1L-208ENST00000488864 LTKP29376 864 aa18.38■□□□□ 0.53
CHD1L-208ENST00000488864 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
CHD1L-208ENST00000488864 USP47Q96K76 1375 aa18.38■□□□□ 0.53
CHD1L-208ENST00000488864 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
CHD1L-208ENST00000488864 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
CHD1L-208ENST00000488864 CEP170BQ9Y4F5 1589 aaPredicted RBP18.37■□□□□ 0.53
CHD1L-208ENST00000488864 TXNDC2Q86VQ3 553 aa18.37■□□□□ 0.53
CHD1L-208ENST00000488864 C14orf93Q9H972 538 aaKnown RBP18.37■□□□□ 0.53
CHD1L-208ENST00000488864 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
CHD1L-208ENST00000488864 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHD1L-208ENST00000488864 GPRASP1Q5JY77 1395 aa18.35■□□□□ 0.53
CHD1L-208ENST00000488864 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
CHD1L-208ENST00000488864 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.53
CHD1L-208ENST00000488864 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.53
CHD1L-208ENST00000488864 BCL11AQ9H165 835 aa18.33■□□□□ 0.53
CHD1L-208ENST00000488864 EID1Q9Y6B2 187 aa18.33■□□□□ 0.53
CHD1L-208ENST00000488864 NEFLP07196 543 aa18.31■□□□□ 0.52
CHD1L-208ENST00000488864 TRAK1Q9UPV9 953 aa18.3■□□□□ 0.52
CHD1L-208ENST00000488864 STK26Q9P289 416 aa18.3■□□□□ 0.52
CHD1L-208ENST00000488864 ARHGAP23Q9P227 1491 aa18.29■□□□□ 0.52
CHD1L-208ENST00000488864 SLIT1O75093 1534 aa18.29■□□□□ 0.52
CHD1L-208ENST00000488864 SLC26A8Q96RN1 970 aa18.29■□□□□ 0.52
CHD1L-208ENST00000488864 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
CHD1L-208ENST00000488864 KIAA1210Q9ULL0 1709 aa18.28■□□□□ 0.52
CHD1L-208ENST00000488864 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
CHD1L-208ENST00000488864 ZNF142P52746 1687 aaPredicted RBP18.27■□□□□ 0.52
CHD1L-208ENST00000488864 ALKQ9UM73 1620 aa18.27■□□□□ 0.52
CHD1L-208ENST00000488864 HSPA2P54652 639 aa18.27■□□□□ 0.51
CHD1L-208ENST00000488864 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
CHD1L-208ENST00000488864 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
CHD1L-208ENST00000488864 ANP32CO43423 234 aa18.26■□□□□ 0.51
CHD1L-208ENST00000488864 ANKLE2Q86XL3 938 aa18.26■□□□□ 0.51
CHD1L-208ENST00000488864 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
CHD1L-208ENST00000488864 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
CHD1L-208ENST00000488864 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
CHD1L-208ENST00000488864 NRXN3Q9Y4C0 1643 aa18.24■□□□□ 0.51
CHD1L-208ENST00000488864 METP08581 1390 aa18.24■□□□□ 0.51
CHD1L-208ENST00000488864 LAMC1P11047 1609 aa18.24■□□□□ 0.51
CHD1L-208ENST00000488864 IQGAP1P46940 1657 aa18.24■□□□□ 0.51
CHD1L-208ENST00000488864 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
CHD1L-208ENST00000488864 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
CHD1L-208ENST00000488864 SAFB2Q14151 953 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHD1L-208ENST00000488864 ADAMTS13Q76LX8 1427 aa18.22■□□□□ 0.51
CHD1L-208ENST00000488864 WASHC2AQ641Q2 1341 aa18.22■□□□□ 0.51
CHD1L-208ENST00000488864 TESK2Q96S53 571 aa18.21■□□□□ 0.51
CHD1L-208ENST00000488864 YTHDC2Q9H6S0 1430 aaKnown RBP18.2■□□□□ 0.5
CHD1L-208ENST00000488864 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
CHD1L-208ENST00000488864 MSH5O43196 834 aa18.19■□□□□ 0.5
CHD1L-208ENST00000488864 KIF7Q2M1P5 1343 aa18.18■□□□□ 0.5
CHD1L-208ENST00000488864 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
CHD1L-208ENST00000488864 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
CHD1L-208ENST00000488864 PRAM1Q96QH2 718 aa18.17■□□□□ 0.5
CHD1L-208ENST00000488864 LMTK3Q96Q04 1460 aa18.16■□□□□ 0.5
CHD1L-208ENST00000488864 WAPLQ7Z5K2 1190 aa18.16■□□□□ 0.5
CHD1L-208ENST00000488864 CCDC7Q96M83 1385 aa18.16■□□□□ 0.5
CHD1L-208ENST00000488864 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
CHD1L-208ENST00000488864 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
CHD1L-208ENST00000488864 POGKQ9P215 609 aa18.15■□□□□ 0.5
CHD1L-208ENST00000488864 MED14O60244 1454 aa18.14■□□□□ 0.49
CHD1L-208ENST00000488864 LRPPRCP42704 1394 aaKnown RBP18.14■□□□□ 0.49
CHD1L-208ENST00000488864 TMF1P82094 1093 aa18.13■□□□□ 0.49
CHD1L-208ENST00000488864 NPHP4O75161 1426 aaPredicted RBP18.13■□□□□ 0.49
CHD1L-208ENST00000488864 PLEKHH1Q9ULM0 1364 aa18.12■□□□□ 0.49
CHD1L-208ENST00000488864 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
CHD1L-208ENST00000488864 PTPRUQ92729 1446 aa18.12■□□□□ 0.49
CHD1L-208ENST00000488864 AMOTL2Q9Y2J4 779 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms