RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 FBXO31Q5XUX0 539 aaPredicted RBP15.36■□□□□ 0.05
USP11-209ENST00000488848 MYO5BQ9ULV0 1848 aa15.35■□□□□ 0.05
USP11-209ENST00000488848 PTPRMP28827 1452 aa15.33■□□□□ 0.05
USP11-209ENST00000488848 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
USP11-209ENST00000488848 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.04
USP11-209ENST00000488848 SLIT1O75093 1534 aa15.33■□□□□ 0.04
USP11-209ENST00000488848 SETBP1Q9Y6X0 1596 aa15.32■□□□□ 0.04
USP11-209ENST00000488848 NBPF8Q3BBV2 869 aa15.31■□□□□ 0.04
USP11-209ENST00000488848 CEP170BQ9Y4F5 1589 aaPredicted RBP15.31■□□□□ 0.04
USP11-209ENST00000488848 DCAF11Q8TEB1 546 aa15.29■□□□□ 0.04
USP11-209ENST00000488848 TMEM2Q9UHN6 1383 aa15.26■□□□□ 0.03
USP11-209ENST00000488848 IQGAP1P46940 1657 aa15.26■□□□□ 0.03
USP11-209ENST00000488848 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
USP11-209ENST00000488848 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
USP11-209ENST00000488848 SETD1AO15047 1707 aaKnown RBP15.25■□□□□ 0.03
USP11-209ENST00000488848 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
USP11-209ENST00000488848 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
USP11-209ENST00000488848 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
USP11-209ENST00000488848 ADGRF5Q8IZF2 1346 aa15.22■□□□□ 0.03
USP11-209ENST00000488848 CEBPAP49715 358 aaPredicted RBP15.22■□□□□ 0.03
USP11-209ENST00000488848 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.22■□□□□ 0.03
USP11-209ENST00000488848 DIP2AQ14689 1571 aa15.2■□□□□ 0.02
USP11-209ENST00000488848 C14orf93Q9H972 538 aaKnown RBP15.2■□□□□ 0.02
USP11-209ENST00000488848 ASXL1Q8IXJ9 1541 aa15.2■□□□□ 0.02
USP11-209ENST00000488848 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
USP11-209ENST00000488848 POLR1AO95602 1720 aaPredicted RBP15.2■□□□□ 0.02
USP11-209ENST00000488848 MED14O60244 1454 aa15.2■□□□□ 0.02
USP11-209ENST00000488848 SCAF11Q99590 1463 aaKnown RBP15.2■□□□□ 0.02
USP11-209ENST00000488848 ZNF326Q5BKZ1 582 aaKnown RBP15.19■□□□□ 0.02
USP11-209ENST00000488848 PLEKHG1Q9ULL1 1385 aa15.19■□□□□ 0.02
USP11-209ENST00000488848 ALKQ9UM73 1620 aa15.18■□□□□ 0.02
USP11-209ENST00000488848 HDGFP51858 240 aaKnown RBP15.18■□□□□ 0.02
USP11-209ENST00000488848 THEMISQ8N1K5 641 aaPredicted RBP15.18■□□□□ 0.02
USP11-209ENST00000488848 USP47Q96K76 1375 aa15.18■□□□□ 0.02
USP11-209ENST00000488848 SBNO2Q9Y2G9 1366 aa15.17■□□□□ 0.02
USP11-209ENST00000488848 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
USP11-209ENST00000488848 KDM4FA0A1W2PPD8 638 aa15.16■□□□□ 0.02
USP11-209ENST00000488848 ZNF316A6NFI3 1004 aaPredicted RBP15.16■□□□□ 0.02
USP11-209ENST00000488848 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
USP11-209ENST00000488848 EIF4G2P78344 907 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP11-209ENST00000488848 DLC1Q96QB1 1528 aa15.16■□□□□ 0.02
USP11-209ENST00000488848 KNDC1Q76NI1 1749 aa15.15■□□□□ 0.02
USP11-209ENST00000488848 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
USP11-209ENST00000488848 TECPR2O15040 1411 aa15.15■□□□□ 0.02
USP11-209ENST00000488848 ADAMTS13Q76LX8 1427 aa15.15■□□□□ 0.02
USP11-209ENST00000488848 CARD11Q9BXL7 1154 aa15.14■□□□□ 0.01
USP11-209ENST00000488848 NBPF1Q3BBV0 1214 aa15.13■□□□□ 0.01
USP11-209ENST00000488848 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
USP11-209ENST00000488848 ARHGEF28Q8N1W1 1705 aaKnown RBP15.12■□□□□ 0.01
USP11-209ENST00000488848 HSPA5P11021 654 aaKnown RBP15.11■□□□□ 0.01
USP11-209ENST00000488848 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
USP11-209ENST00000488848 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
USP11-209ENST00000488848 LTKP29376 864 aa15.1■□□□□ 0.01
USP11-209ENST00000488848 CPS1P31327 1500 aa15.1■□□□□ 0.01
USP11-209ENST00000488848 LMTK3Q96Q04 1460 aa15.09■□□□□ 0.01
USP11-209ENST00000488848 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
USP11-209ENST00000488848 LRPPRCP42704 1394 aaKnown RBP15.09■□□□□ 0.01
USP11-209ENST00000488848 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
USP11-209ENST00000488848 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
USP11-209ENST00000488848 EID1Q9Y6B2 187 aa15.08■□□□□ 0
USP11-209ENST00000488848 XRN1Q8IZH2 1706 aaKnown RBP15.07■□□□□ 0
USP11-209ENST00000488848 SIRT1Q96EB6 747 aa15.07■□□□□ 0
USP11-209ENST00000488848 TESK2Q96S53 571 aa15.07■□□□□ 0
USP11-209ENST00000488848 FAM135BQ49AJ0 1406 aa15.07■□□□□ 0
USP11-209ENST00000488848 TBX22Q9Y458 520 aa15.06■□□□□ 0
USP11-209ENST00000488848 PTCH1Q13635 1447 aa15.06■□□□□ 0
USP11-209ENST00000488848 TXNDC2Q86VQ3 553 aa15.05■□□□□ -0
USP11-209ENST00000488848 QRICH2Q9H0J4 1663 aa15.04■□□□□ -0
USP11-209ENST00000488848 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
USP11-209ENST00000488848 NWD1Q149M9 1564 aa15.03■□□□□ -0
USP11-209ENST00000488848 METP08581 1390 aa15.03■□□□□ -0
USP11-209ENST00000488848 CCDC7Q96M83 1385 aa15.03■□□□□ -0
USP11-209ENST00000488848 ST20-MTHFSA0A0A6YYL1 179 aa15.03■□□□□ -0
USP11-209ENST00000488848 ADGRB2O60241 1585 aa15.02□□□□□ -0.01
USP11-209ENST00000488848 NPHP4O75161 1426 aaPredicted RBP15.01□□□□□ -0.01
USP11-209ENST00000488848 CHD2O14647 1828 aaKnown RBP15.01□□□□□ -0.01
USP11-209ENST00000488848 SOCS7O14512 581 aa15.01□□□□□ -0.01
USP11-209ENST00000488848 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
USP11-209ENST00000488848 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
USP11-209ENST00000488848 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
USP11-209ENST00000488848 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
USP11-209ENST00000488848 PTPRUQ92729 1446 aa14.99□□□□□ -0.01
USP11-209ENST00000488848 KIF7Q2M1P5 1343 aa14.98□□□□□ -0.01
USP11-209ENST00000488848 STRCQ7RTU9 1775 aa14.98□□□□□ -0.01
USP11-209ENST00000488848 TMEM132EQ6IEE7 984 aa14.97□□□□□ -0.01
USP11-209ENST00000488848 TULP4Q9NRJ4 1543 aa14.97□□□□□ -0.01
USP11-209ENST00000488848 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.01
USP11-209ENST00000488848 MYOM1P52179 1685 aa14.96□□□□□ -0.01
USP11-209ENST00000488848 DISP3Q9P2K9 1392 aa14.96□□□□□ -0.02
USP11-209ENST00000488848 NKTRP30414 1462 aaKnown RBP14.95□□□□□ -0.02
USP11-209ENST00000488848 TMF1P82094 1093 aa14.95□□□□□ -0.02
USP11-209ENST00000488848 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
USP11-209ENST00000488848 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
USP11-209ENST00000488848 TRAK1Q9UPV9 953 aa14.93□□□□□ -0.02
USP11-209ENST00000488848 ROBO2Q9HCK4 1378 aa14.93□□□□□ -0.02
USP11-209ENST00000488848 HIRIP3Q9BW71 556 aaPredicted RBP14.92□□□□□ -0.02
USP11-209ENST00000488848 NINLQ9Y2I6 1382 aa14.92□□□□□ -0.02
USP11-209ENST00000488848 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.9□□□□□ -0.02
USP11-209ENST00000488848 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
USP11-209ENST00000488848 NCOA3Q9Y6Q9 1424 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms