RNA–Protein interactions for RNA: ENST00000488722.5

HP1BP3-213, Transcript of heterochromatin protein 1 binding protein 3, human

TSL 5

Gene HP1BP3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HP1BP3-213	ENST00000488722	DDX11L8	A8MPP1	907 aa		13.93	□□□□□ -0.18
HP1BP3-213	ENST00000488722	TBC1D2	Q9BYX2	928 aa		13.93	□□□□□ -0.18
HP1BP3-213	ENST00000488722	POTEB3	A0JP26	581 aa		13.91	□□□□□ -0.18
HP1BP3-213	ENST00000488722	POTEB	Q6S5H4	581 aa		13.91	□□□□□ -0.18
HP1BP3-213	ENST00000488722	POLR3E	Q9NVU0	708 aa		13.91	□□□□□ -0.18
HP1BP3-213	ENST00000488722	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.91	□□□□□ -0.18
HP1BP3-213	ENST00000488722	VPS9D1	Q9Y2B5	631 aa		13.91	□□□□□ -0.18
HP1BP3-213	ENST00000488722	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.9	□□□□□ -0.18
HP1BP3-213	ENST00000488722	DIXDC1	Q155Q3	683 aa		13.89	□□□□□ -0.19
HP1BP3-213	ENST00000488722	SPIRE2	Q8WWL2	714 aa		13.89	□□□□□ -0.19
HP1BP3-213	ENST00000488722	HS3ST6	Q96QI5	342 aa		13.89	□□□□□ -0.19
HP1BP3-213	ENST00000488722	LCE2D	Q5TA82	110 aa	Predicted RBP	13.88	□□□□□ -0.19
HP1BP3-213	ENST00000488722	CLK2	P49760	499 aa	Known RBP	13.86	□□□□□ -0.19
HP1BP3-213	ENST00000488722	SWT1	Q5T5J6	900 aa	Known RBP	13.86	□□□□□ -0.19
HP1BP3-213	ENST00000488722	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
HP1BP3-213	ENST00000488722	FAM98C	Q17RN3	349 aa	Known RBP	13.84	□□□□□ -0.19
HP1BP3-213	ENST00000488722	RDH13	Q8NBN7	331 aa		13.84	□□□□□ -0.19
HP1BP3-213	ENST00000488722	LIMD1	Q9UGP4	676 aa		13.83	□□□□□ -0.2
HP1BP3-213	ENST00000488722	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.82	□□□□□ -0.2
HP1BP3-213	ENST00000488722	NUTM1	Q86Y26	1132 aa		13.82	□□□□□ -0.2
HP1BP3-213	ENST00000488722	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.82	□□□□□ -0.2
HP1BP3-213	ENST00000488722	TK2	O00142	265 aa		13.81	□□□□□ -0.2
HP1BP3-213	ENST00000488722	SLC10A3	P09131	477 aa		13.81	□□□□□ -0.2
HP1BP3-213	ENST00000488722	RIC3	Q7Z5B4	369 aa		13.81	□□□□□ -0.2
HP1BP3-213	ENST00000488722	FLII	Q13045	1269 aa		13.8	□□□□□ -0.2
HP1BP3-213	ENST00000488722	LAPTM4B	Q86VI4	370 aa		13.8	□□□□□ -0.2
HP1BP3-213	ENST00000488722	NBPF3	Q9H094	633 aa		13.8	□□□□□ -0.2
HP1BP3-213	ENST00000488722	MOXD2P	A6NHM9	499 aa		13.79	□□□□□ -0.2
HP1BP3-213	ENST00000488722	GCGR	P47871	477 aa		13.79	□□□□□ -0.2
HP1BP3-213	ENST00000488722	SPTLC1	O15269	473 aa		13.78	□□□□□ -0.2
HP1BP3-213	ENST00000488722	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.78	□□□□□ -0.2
HP1BP3-213	ENST00000488722	KDM4A	O75164	1064 aa		13.77	□□□□□ -0.21
HP1BP3-213	ENST00000488722	HDGF	P51858	240 aa	Known RBP	13.77	□□□□□ -0.21
HP1BP3-213	ENST00000488722	LSM11	P83369	360 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
HP1BP3-213	ENST00000488722	RSPH4A	Q5TD94	716 aa		13.77	□□□□□ -0.21
HP1BP3-213	ENST00000488722	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.77	□□□□□ -0.21
HP1BP3-213	ENST00000488722	SAMD7	Q7Z3H4	446 aa		13.77	□□□□□ -0.21
HP1BP3-213	ENST00000488722	ZMYND15	Q9H091	742 aa		13.77	□□□□□ -0.21
HP1BP3-213	ENST00000488722	TUSC1	Q2TAM9	212 aa		13.76	□□□□□ -0.21
HP1BP3-213	ENST00000488722	NDUFV2	P19404	249 aa		13.75	□□□□□ -0.21
HP1BP3-213	ENST00000488722	ADGRD1	Q6QNK2	874 aa		13.75	□□□□□ -0.21
HP1BP3-213	ENST00000488722	GJA5	P36382	358 aa		13.74	□□□□□ -0.21
HP1BP3-213	ENST00000488722	SLF2	Q8IX21	1173 aa		13.73	□□□□□ -0.21
HP1BP3-213	ENST00000488722	ZFR	Q96KR1	1074 aa	Known RBP	13.73	□□□□□ -0.21
HP1BP3-213	ENST00000488722	RFC5	P40937	340 aa		13.72	□□□□□ -0.21
HP1BP3-213	ENST00000488722	USP46	P62068	366 aa		13.72	□□□□□ -0.21
HP1BP3-213	ENST00000488722	MCM6	Q14566	821 aa		13.72	□□□□□ -0.21
HP1BP3-213	ENST00000488722	PPP2R2D	Q66LE6	453 aa		13.72	□□□□□ -0.21
HP1BP3-213	ENST00000488722	MRPL50	Q8N5N7	158 aa	Known RBP	13.72	□□□□□ -0.21
HP1BP3-213	ENST00000488722	HOXA2	O43364	376 aa		13.71	□□□□□ -0.21
HP1BP3-213	ENST00000488722	HR	O43593	1189 aa		13.71	□□□□□ -0.21
HP1BP3-213	ENST00000488722	SLC4A3	P48751	1232 aa		13.71	□□□□□ -0.21
HP1BP3-213	ENST00000488722	SUPT5H	O00267	1087 aa	Known RBP	13.7	□□□□□ -0.22
HP1BP3-213	ENST00000488722	CSPP1	Q1MSJ5	1256 aa		13.7	□□□□□ -0.22
HP1BP3-213	ENST00000488722	PCDHB15	Q9Y5E8	787 aa		13.7	□□□□□ -0.22
HP1BP3-213	ENST00000488722	QPCT	Q16769	361 aa		13.68	□□□□□ -0.22
HP1BP3-213	ENST00000488722	LILRB3	O75022	631 aa		13.67	□□□□□ -0.22
HP1BP3-213	ENST00000488722	RNF40	O75150	1001 aa		13.67	□□□□□ -0.22
HP1BP3-213	ENST00000488722	CFH	P08603	1231 aa		13.67	□□□□□ -0.22
HP1BP3-213	ENST00000488722	HLA-C	Q95604	372 aa		13.66	□□□□□ -0.22
HP1BP3-213	ENST00000488722	FDX1	P10109	184 aa		13.65	□□□□□ -0.22
HP1BP3-213	ENST00000488722	GUCA2A	Q02747	115 aa		13.65	□□□□□ -0.22
HP1BP3-213	ENST00000488722	FUT2	Q10981	343 aa		13.64	□□□□□ -0.23
HP1BP3-213	ENST00000488722	TMEM259	Q4ZIN3	620 aa		13.64	□□□□□ -0.23
HP1BP3-213	ENST00000488722	ANKRD13D	Q6ZTN6	518 aa		13.64	□□□□□ -0.23
HP1BP3-213	ENST00000488722	BANK1	Q8NDB2	785 aa		13.64	□□□□□ -0.23
HP1BP3-213	ENST00000488722	CABLES1	Q8TDN4	633 aa		13.64	□□□□□ -0.23
HP1BP3-213	ENST00000488722	PCDHGC3	Q9UN70	934 aa		13.64	□□□□□ -0.23
HP1BP3-213	ENST00000488722	RTL5	Q5HYW3	569 aa	Predicted RBP	13.63	□□□□□ -0.23
HP1BP3-213	ENST00000488722	PRPF38B	Q5VTL8	546 aa	Known RBP	13.63	□□□□□ -0.23
HP1BP3-213	ENST00000488722	LRCH3	Q96II8	777 aa		13.63	□□□□□ -0.23
HP1BP3-213	ENST00000488722	SPDYE5	A6NIY4	337 aa		13.62	□□□□□ -0.23
HP1BP3-213	ENST00000488722	UBTF	P17480	764 aa	Known RBP	13.62	□□□□□ -0.23
HP1BP3-213	ENST00000488722	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.62	□□□□□ -0.23
HP1BP3-213	ENST00000488722	HRC	P23327	699 aa		13.61	□□□□□ -0.23
HP1BP3-213	ENST00000488722	CLUAP1	Q96AJ1	413 aa		13.61	□□□□□ -0.23
HP1BP3-213	ENST00000488722	SNRK	Q9NRH2	765 aa		13.61	□□□□□ -0.23
HP1BP3-213	ENST00000488722	ZBTB3	Q9H5J0	574 aa		13.6	□□□□□ -0.23
HP1BP3-213	ENST00000488722	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.59	□□□□□ -0.23
HP1BP3-213	ENST00000488722	NUTM2E	B1AL46	878 aa	Predicted RBP	13.59	□□□□□ -0.23
HP1BP3-213	ENST00000488722	KMT5B	Q4FZB7	885 aa		13.59	□□□□□ -0.23
HP1BP3-213	ENST00000488722	GRIPAP1	Q4V328	841 aa		13.59	□□□□□ -0.23
HP1BP3-213	ENST00000488722	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.59	□□□□□ -0.23
HP1BP3-213	ENST00000488722	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.59	□□□□□ -0.23
HP1BP3-213	ENST00000488722		A6NJR5	290 aa		13.58	□□□□□ -0.24
HP1BP3-213	ENST00000488722	ATP6V1A	P38606	617 aa		13.58	□□□□□ -0.24
HP1BP3-213	ENST00000488722	ANKK1	Q8NFD2	765 aa		13.58	□□□□□ -0.24
HP1BP3-213	ENST00000488722	STAC3	Q96MF2	364 aa		13.58	□□□□□ -0.24
HP1BP3-213	ENST00000488722	NECTIN2	Q92692	538 aa		13.57	□□□□□ -0.24
HP1BP3-213	ENST00000488722	GOLGA8CP	A6NN73	597 aa		13.56	□□□□□ -0.24
HP1BP3-213	ENST00000488722	KRTAP3-3	Q9BYR6	98 aa		13.56	□□□□□ -0.24
HP1BP3-213	ENST00000488722	KRTAP3-2	Q9BYR7	98 aa		13.56	□□□□□ -0.24
HP1BP3-213	ENST00000488722	SOWAHB	A6NEL2	793 aa		13.55	□□□□□ -0.24
HP1BP3-213	ENST00000488722	ACTN4	O43707	911 aa	Known RBP	13.55	□□□□□ -0.24
HP1BP3-213	ENST00000488722	POM121	Q96HA1	1249 aa		13.55	□□□□□ -0.24
HP1BP3-213	ENST00000488722	AP1G2	O75843	785 aa		13.54	□□□□□ -0.24
HP1BP3-213	ENST00000488722	BCAM	P50895	628 aa		13.54	□□□□□ -0.24
HP1BP3-213	ENST00000488722	MTMR2	Q13614	643 aa		13.54	□□□□□ -0.24
HP1BP3-213	ENST00000488722	MTMR14	Q8NCE2	650 aa		13.54	□□□□□ -0.24
HP1BP3-213	ENST00000488722	MORN1	Q5T089	497 aa		13.52	□□□□□ -0.25

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