RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
CTNS-206ENST00000488623 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
CTNS-206ENST00000488623 A2ML1A8K2U0 1454 aa21.59■■□□□ 1.05
CTNS-206ENST00000488623 NLRP1Q9C000 1473 aa21.59■■□□□ 1.05
CTNS-206ENST00000488623 IFT172Q9UG01 1749 aa21.59■■□□□ 1.05
CTNS-206ENST00000488623 PRAG1Q86YV5 1406 aa21.58■■□□□ 1.05
CTNS-206ENST00000488623 FBXO41Q8TF61 875 aa21.58■■□□□ 1.05
CTNS-206ENST00000488623 PPLO60437 1756 aa21.58■■□□□ 1.04
CTNS-206ENST00000488623 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
CTNS-206ENST00000488623 ADGRF5Q8IZF2 1346 aa21.56■■□□□ 1.04
CTNS-206ENST00000488623 CEP170BQ9Y4F5 1589 aaPredicted RBP21.56■■□□□ 1.04
CTNS-206ENST00000488623 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
CTNS-206ENST00000488623 NUTM2DQ5VT03 806 aaPredicted RBP21.55■■□□□ 1.04
CTNS-206ENST00000488623 MYOM2P54296 1465 aa21.54■■□□□ 1.04
CTNS-206ENST00000488623 UBR1Q8IWV7 1749 aa21.54■■□□□ 1.04
CTNS-206ENST00000488623 KDM5AP29375 1690 aaKnown RBP21.53■■□□□ 1.04
CTNS-206ENST00000488623 VGFO15240 615 aaPredicted RBP21.52■■□□□ 1.04
CTNS-206ENST00000488623 NRXN1Q9ULB1 1477 aa21.52■■□□□ 1.03
CTNS-206ENST00000488623 ZFYVE9O95405 1425 aa21.5■■□□□ 1.03
CTNS-206ENST00000488623 RIMS2Q9UQ26 1411 aa21.5■■□□□ 1.03
CTNS-206ENST00000488623 NBPF1Q3BBV0 1214 aa21.49■■□□□ 1.03
CTNS-206ENST00000488623 CERKQ8TCT0 537 aa21.49■■□□□ 1.03
CTNS-206ENST00000488623 RALGAPBQ86X10 1494 aa21.49■■□□□ 1.03
CTNS-206ENST00000488623 TRPM1Q7Z4N2 1603 aa21.48■■□□□ 1.03
CTNS-206ENST00000488623 TMEM2Q9UHN6 1383 aa21.48■■□□□ 1.03
CTNS-206ENST00000488623 THEMISQ8N1K5 641 aaPredicted RBP21.47■■□□□ 1.03
CTNS-206ENST00000488623 CFAP70Q5T0N1 1121 aa21.46■■□□□ 1.03
CTNS-206ENST00000488623 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.46■■□□□ 1.03
CTNS-206ENST00000488623 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.02
CTNS-206ENST00000488623 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
CTNS-206ENST00000488623 C14orf93Q9H972 538 aaKnown RBP21.44■■□□□ 1.02
CTNS-206ENST00000488623 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
CTNS-206ENST00000488623 ROCK2O75116 1388 aaKnown RBP21.44■■□□□ 1.02
CTNS-206ENST00000488623 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
CTNS-206ENST00000488623 POLR1AO95602 1720 aaPredicted RBP21.43■■□□□ 1.02
CTNS-206ENST00000488623 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
CTNS-206ENST00000488623 LTKP29376 864 aa21.42■■□□□ 1.02
CTNS-206ENST00000488623 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
CTNS-206ENST00000488623 ARHGAP23Q9P227 1491 aa21.42■■□□□ 1.02
CTNS-206ENST00000488623 SLIT1O75093 1534 aa21.41■■□□□ 1.02
CTNS-206ENST00000488623 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
CTNS-206ENST00000488623 TXNDC2Q86VQ3 553 aa21.41■■□□□ 1.02
CTNS-206ENST00000488623 HSPA5P11021 654 aaKnown RBP21.4■■□□□ 1.02
CTNS-206ENST00000488623 EIF4G2P78344 907 aaKnown RBP eCLIP21.39■■□□□ 1.014e-10■■■■■ 50.6
CTNS-206ENST00000488623 HIRIP3Q9BW71 556 aaPredicted RBP21.39■■□□□ 1.01
CTNS-206ENST00000488623 LTBP4Q8N2S1 1624 aa21.38■■□□□ 1.01
CTNS-206ENST00000488623 EID1Q9Y6B2 187 aa21.38■■□□□ 1.01
CTNS-206ENST00000488623 LAMC1P11047 1609 aa21.36■■□□□ 1.01
CTNS-206ENST00000488623 ALKQ9UM73 1620 aa21.34■■□□□ 1.01
CTNS-206ENST00000488623 TMEM132EQ6IEE7 984 aa21.34■■□□□ 1.01
CTNS-206ENST00000488623 USP47Q96K76 1375 aa21.34■■□□□ 1.01
CTNS-206ENST00000488623 SETBP1Q9Y6X0 1596 aa21.33■■□□□ 1.01
CTNS-206ENST00000488623 PLEKHG1Q9ULL1 1385 aa21.33■■□□□ 1
CTNS-206ENST00000488623 ANKLE2Q86XL3 938 aa21.32■■□□□ 1
CTNS-206ENST00000488623 NRXN3Q9Y4C0 1643 aa21.32■■□□□ 1
CTNS-206ENST00000488623 ADGRB1O14514 1584 aa21.31■■□□□ 1
CTNS-206ENST00000488623 BCANQ96GW7 911 aa21.31■■□□□ 1
CTNS-206ENST00000488623 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
CTNS-206ENST00000488623 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
CTNS-206ENST00000488623 IQGAP1P46940 1657 aa21.29■■□□□ 1
CTNS-206ENST00000488623 ST20-MTHFSA0A0A6YYL1 179 aa21.29■■□□□ 1
CTNS-206ENST00000488623 SETD1AO15047 1707 aaKnown RBP21.28■■□□□ 1
CTNS-206ENST00000488623 ASXL1Q8IXJ9 1541 aa21.28■■□□□ 1
CTNS-206ENST00000488623 ADAMTS13Q76LX8 1427 aa21.28■■□□□ 1
CTNS-206ENST00000488623 IQSEC2Q5JU85 1478 aa21.27■■□□□ 1
CTNS-206ENST00000488623 MED14O60244 1454 aa21.26■□□□□ 0.99
CTNS-206ENST00000488623 METP08581 1390 aa21.25■□□□□ 0.99
CTNS-206ENST00000488623 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
CTNS-206ENST00000488623 TRAK1Q9UPV9 953 aa21.25■□□□□ 0.99
CTNS-206ENST00000488623 TBX22Q9Y458 520 aa21.24■□□□□ 0.99
CTNS-206ENST00000488623 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
CTNS-206ENST00000488623 STK26Q9P289 416 aa21.23■□□□□ 0.99
CTNS-206ENST00000488623 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
CTNS-206ENST00000488623 NPHP4O75161 1426 aaPredicted RBP21.21■□□□□ 0.99
CTNS-206ENST00000488623 TESK2Q96S53 571 aa21.2■□□□□ 0.98
CTNS-206ENST00000488623 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
CTNS-206ENST00000488623 EIF3AQ14152 1382 aaKnown RBP21.19■□□□□ 0.98
CTNS-206ENST00000488623 ABCC11Q96J66 1382 aa21.17■□□□□ 0.98
CTNS-206ENST00000488623 DIP2AQ14689 1571 aa21.16■□□□□ 0.98
CTNS-206ENST00000488623 ARHGEF28Q8N1W1 1705 aaKnown RBP21.15■□□□□ 0.98
CTNS-206ENST00000488623 CPS1P31327 1500 aa21.15■□□□□ 0.98
CTNS-206ENST00000488623 PTPRUQ92729 1446 aa21.15■□□□□ 0.98
CTNS-206ENST00000488623 WASHC2AQ641Q2 1341 aa21.15■□□□□ 0.98
CTNS-206ENST00000488623 CENPJQ9HC77 1338 aaPredicted RBP21.15■□□□□ 0.98
CTNS-206ENST00000488623 STRCP1A6NGW2 1772 aa21.13■□□□□ 0.97
CTNS-206ENST00000488623 SIRT1Q96EB6 747 aa21.13■□□□□ 0.97
CTNS-206ENST00000488623 DLC1Q96QB1 1528 aa21.13■□□□□ 0.97
CTNS-206ENST00000488623 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
CTNS-206ENST00000488623 KIF7Q2M1P5 1343 aa21.12■□□□□ 0.97
CTNS-206ENST00000488623 PRAM1Q96QH2 718 aa21.12■□□□□ 0.97
CTNS-206ENST00000488623 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
CTNS-206ENST00000488623 WAPLQ7Z5K2 1190 aa21.11■□□□□ 0.97
CTNS-206ENST00000488623 TECPR2O15040 1411 aa21.11■□□□□ 0.97
CTNS-206ENST00000488623 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
CTNS-206ENST00000488623 TMF1P82094 1093 aa21.1■□□□□ 0.97
CTNS-206ENST00000488623 POGKQ9P215 609 aa21.1■□□□□ 0.97
CTNS-206ENST00000488623 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
CTNS-206ENST00000488623 KNDC1Q76NI1 1749 aa21.09■□□□□ 0.97
CTNS-206ENST00000488623 UBAP1LF5GYI3 381 aa21.09■□□□□ 0.97
CTNS-206ENST00000488623 SAFB2Q14151 953 aaKnown RBP eCLIP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms