RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.85■□□□□ 0.29
ABCA2-219ENST00000488535 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
ABCA2-219ENST00000488535 BCAR3O75815 825 aa16.85■□□□□ 0.29
ABCA2-219ENST00000488535 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
ABCA2-219ENST00000488535 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
ABCA2-219ENST00000488535 BRD4O60885 1362 aaPredicted RBP16.85■□□□□ 0.29
ABCA2-219ENST00000488535 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
ABCA2-219ENST00000488535 ZCCHC11Q5TAX3 1644 aaKnown RBP16.85■□□□□ 0.29
ABCA2-219ENST00000488535 RAPGEF3O95398 923 aa16.84■□□□□ 0.29
ABCA2-219ENST00000488535 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
ABCA2-219ENST00000488535 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
ABCA2-219ENST00000488535 PANK3Q9H999 370 aa16.83■□□□□ 0.29
ABCA2-219ENST00000488535 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
ABCA2-219ENST00000488535 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.28
ABCA2-219ENST00000488535 XRCC6P12956 609 aaKnown RBP eCLIP16.83■□□□□ 0.28
ABCA2-219ENST00000488535 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
ABCA2-219ENST00000488535 PREX2Q70Z35 1606 aa16.82■□□□□ 0.28
ABCA2-219ENST00000488535 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
ABCA2-219ENST00000488535 FANCAO15360 1455 aa16.82■□□□□ 0.28
ABCA2-219ENST00000488535 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
ABCA2-219ENST00000488535 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
ABCA2-219ENST00000488535 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
ABCA2-219ENST00000488535 CLUAP1Q96AJ1 413 aa16.8■□□□□ 0.28
ABCA2-219ENST00000488535 IGHDP01880 384 aa16.79■□□□□ 0.28
ABCA2-219ENST00000488535 PANK1Q8TE04 598 aa16.79■□□□□ 0.28
ABCA2-219ENST00000488535 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
ABCA2-219ENST00000488535 CROCC2H7BZ55 1655 aa16.78■□□□□ 0.28
ABCA2-219ENST00000488535 GOLGA2Q08379 1002 aa16.78■□□□□ 0.28
ABCA2-219ENST00000488535 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.28
ABCA2-219ENST00000488535 ADGRL1O94910 1474 aa16.77■□□□□ 0.28
ABCA2-219ENST00000488535 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.27
ABCA2-219ENST00000488535 KDM2BQ8NHM5 1336 aa16.77■□□□□ 0.27
ABCA2-219ENST00000488535 A0A0U1RQG5 324 aaPredicted RBP16.76■□□□□ 0.27
ABCA2-219ENST00000488535 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
ABCA2-219ENST00000488535 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
ABCA2-219ENST00000488535 UHRF1BP1LA0JNW5 1464 aa16.76■□□□□ 0.27
ABCA2-219ENST00000488535 MYO5CQ9NQX4 1742 aa16.76■□□□□ 0.27
ABCA2-219ENST00000488535 MFAP1P55081 439 aaKnown RBP16.76■□□□□ 0.27
ABCA2-219ENST00000488535 NUTM2DQ5VT03 806 aaPredicted RBP16.76■□□□□ 0.27
ABCA2-219ENST00000488535 RBM10P98175 930 aaKnown RBP16.76■□□□□ 0.27
ABCA2-219ENST00000488535 KANK1Q14678 1352 aa16.74■□□□□ 0.27
ABCA2-219ENST00000488535 CD109Q6YHK3 1445 aa16.74■□□□□ 0.27
ABCA2-219ENST00000488535 APAF1O14727 1248 aa16.73■□□□□ 0.27
ABCA2-219ENST00000488535 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
ABCA2-219ENST00000488535 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
ABCA2-219ENST00000488535 TRAK2O60296 914 aa16.72■□□□□ 0.27
ABCA2-219ENST00000488535 FAM69CQ0P6D2 419 aa16.72■□□□□ 0.27
ABCA2-219ENST00000488535 KNSTRNQ9Y448 316 aa16.72■□□□□ 0.27
ABCA2-219ENST00000488535 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
ABCA2-219ENST00000488535 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
ABCA2-219ENST00000488535 BCORL1Q5H9F3 1711 aa16.71■□□□□ 0.27
ABCA2-219ENST00000488535 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
ABCA2-219ENST00000488535 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
ABCA2-219ENST00000488535 MLECQ14165 292 aa16.69■□□□□ 0.26
ABCA2-219ENST00000488535 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
ABCA2-219ENST00000488535 DUOX2Q9NRD8 1548 aa16.69■□□□□ 0.26
ABCA2-219ENST00000488535 RRP9O43818 475 aaKnown RBP16.68■□□□□ 0.26
ABCA2-219ENST00000488535 PLA2R1Q13018 1463 aa16.68■□□□□ 0.26
ABCA2-219ENST00000488535 MCM4P33991 863 aa16.68■□□□□ 0.26
ABCA2-219ENST00000488535 ABCC1P33527 1531 aa16.67■□□□□ 0.26
ABCA2-219ENST00000488535 ESPNB1AK53 854 aa16.67■□□□□ 0.26
ABCA2-219ENST00000488535 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
ABCA2-219ENST00000488535 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
ABCA2-219ENST00000488535 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
ABCA2-219ENST00000488535 CLCN1P35523 988 aa16.65■□□□□ 0.26
ABCA2-219ENST00000488535 USP19O94966 1318 aa16.65■□□□□ 0.26
ABCA2-219ENST00000488535 ERBINQ96RT1 1412 aa16.65■□□□□ 0.26
ABCA2-219ENST00000488535 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
ABCA2-219ENST00000488535 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
ABCA2-219ENST00000488535 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
ABCA2-219ENST00000488535 ERBB4Q15303 1308 aa16.63■□□□□ 0.25
ABCA2-219ENST00000488535 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
ABCA2-219ENST00000488535 TMF1P82094 1093 aa16.61■□□□□ 0.25
ABCA2-219ENST00000488535 A2MP01023 1474 aa16.61■□□□□ 0.25
ABCA2-219ENST00000488535 PER1O15534 1290 aaPredicted RBP16.61■□□□□ 0.25
ABCA2-219ENST00000488535 KIAA1211Q6ZU35 1233 aa16.61■□□□□ 0.25
ABCA2-219ENST00000488535 MRE11P49959 708 aa16.6■□□□□ 0.25
ABCA2-219ENST00000488535 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
ABCA2-219ENST00000488535 PPP2R1AP30153 589 aa16.6■□□□□ 0.25
ABCA2-219ENST00000488535 SAFB2Q14151 953 aaKnown RBP eCLIP16.6■□□□□ 0.25
ABCA2-219ENST00000488535 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
ABCA2-219ENST00000488535 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
ABCA2-219ENST00000488535 ATP7AQ04656 1500 aa16.59■□□□□ 0.25
ABCA2-219ENST00000488535 RALGAPBQ86X10 1494 aa16.59■□□□□ 0.25
ABCA2-219ENST00000488535 ANP32BQ92688 251 aaKnown RBP16.59■□□□□ 0.25
ABCA2-219ENST00000488535 PARD3Q8TEW0 1356 aa16.59■□□□□ 0.25
ABCA2-219ENST00000488535 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
ABCA2-219ENST00000488535 KDM5DQ9BY66 1539 aa16.58■□□□□ 0.24
ABCA2-219ENST00000488535 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
ABCA2-219ENST00000488535 TPRNQ4KMQ1 711 aa16.58■□□□□ 0.24
ABCA2-219ENST00000488535 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
ABCA2-219ENST00000488535 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 ADGRF5Q8IZF2 1346 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 RTEL1-TNFRSF6BF6WH68 1400 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 PRDM10Q9NQV6 1147 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms