RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 KCNA6P17658 529 aa17.2■□□□□ 0.34
VAMP7-206ENST00000488344 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
VAMP7-206ENST00000488344 BCANQ96GW7 911 aa17.19■□□□□ 0.34
VAMP7-206ENST00000488344 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
VAMP7-206ENST00000488344 STRCP1A6NGW2 1772 aa17.19■□□□□ 0.34
VAMP7-206ENST00000488344 UNC13BO14795 1591 aa17.19■□□□□ 0.34
VAMP7-206ENST00000488344 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
VAMP7-206ENST00000488344 MED1Q15648 1581 aaPredicted RBP17.18■□□□□ 0.34
VAMP7-206ENST00000488344 NKTRP30414 1462 aaKnown RBP17.18■□□□□ 0.34
VAMP7-206ENST00000488344 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
VAMP7-206ENST00000488344 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
VAMP7-206ENST00000488344 PLEKHG1Q9ULL1 1385 aa17.16■□□□□ 0.34
VAMP7-206ENST00000488344 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
VAMP7-206ENST00000488344 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
VAMP7-206ENST00000488344 ZFYVE9O95405 1425 aa17.14■□□□□ 0.33
VAMP7-206ENST00000488344 RIMS2Q9UQ26 1411 aa17.14■□□□□ 0.33
VAMP7-206ENST00000488344 GCC2Q8IWJ2 1684 aa17.14■□□□□ 0.33
VAMP7-206ENST00000488344 NUP155O75694 1391 aa17.14■□□□□ 0.33
VAMP7-206ENST00000488344 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
VAMP7-206ENST00000488344 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
VAMP7-206ENST00000488344 IQGAP3Q86VI3 1631 aa17.12■□□□□ 0.33
VAMP7-206ENST00000488344 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
VAMP7-206ENST00000488344 ITGAEP38570 1179 aa17.11■□□□□ 0.33
VAMP7-206ENST00000488344 MSH6P52701 1360 aa17.11■□□□□ 0.33
VAMP7-206ENST00000488344 TBX22Q9Y458 520 aa17.1■□□□□ 0.33
VAMP7-206ENST00000488344 TMEM131LA2VDJ0 1609 aa17.1■□□□□ 0.33
VAMP7-206ENST00000488344 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
VAMP7-206ENST00000488344 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
VAMP7-206ENST00000488344 E9PCH4 1651 aa17.07■□□□□ 0.32
VAMP7-206ENST00000488344 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
VAMP7-206ENST00000488344 XIRP1Q702N8 1843 aaKnown RBP17.04■□□□□ 0.32
VAMP7-206ENST00000488344 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
VAMP7-206ENST00000488344 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
VAMP7-206ENST00000488344 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
VAMP7-206ENST00000488344 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
VAMP7-206ENST00000488344 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.31
VAMP7-206ENST00000488344 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
VAMP7-206ENST00000488344 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
VAMP7-206ENST00000488344 TRPM2O94759 1503 aa17.01■□□□□ 0.31
VAMP7-206ENST00000488344 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
VAMP7-206ENST00000488344 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
VAMP7-206ENST00000488344 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
VAMP7-206ENST00000488344 ZNF326Q5BKZ1 582 aaKnown RBP16.98■□□□□ 0.31
VAMP7-206ENST00000488344 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
VAMP7-206ENST00000488344 ATF3P18847 181 aa16.97■□□□□ 0.31
VAMP7-206ENST00000488344 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
VAMP7-206ENST00000488344 MYO5BQ9ULV0 1848 aa16.97■□□□□ 0.31
VAMP7-206ENST00000488344 NAIPQ13075 1403 aa16.96■□□□□ 0.3
VAMP7-206ENST00000488344 JCADQ9P266 1359 aa16.95■□□□□ 0.3
VAMP7-206ENST00000488344 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
VAMP7-206ENST00000488344 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
VAMP7-206ENST00000488344 DCCP43146 1447 aa16.94■□□□□ 0.3
VAMP7-206ENST00000488344 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
VAMP7-206ENST00000488344 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
VAMP7-206ENST00000488344 TRIM52Q96A61 297 aa16.91■□□□□ 0.3
VAMP7-206ENST00000488344 PTPRUQ92729 1446 aa16.89■□□□□ 0.29
VAMP7-206ENST00000488344 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
VAMP7-206ENST00000488344 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
VAMP7-206ENST00000488344 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
VAMP7-206ENST00000488344 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
VAMP7-206ENST00000488344 RGS17Q9UGC6 210 aaPredicted RBP16.88■□□□□ 0.29
VAMP7-206ENST00000488344 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
VAMP7-206ENST00000488344 CLTCL1P53675 1640 aa16.87■□□□□ 0.29
VAMP7-206ENST00000488344 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
VAMP7-206ENST00000488344 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
VAMP7-206ENST00000488344 XRN1Q8IZH2 1706 aaKnown RBP16.86■□□□□ 0.29
VAMP7-206ENST00000488344 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.86■□□□□ 0.29
VAMP7-206ENST00000488344 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
VAMP7-206ENST00000488344 NRXN3Q9Y4C0 1643 aa16.85■□□□□ 0.29
VAMP7-206ENST00000488344 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
VAMP7-206ENST00000488344 METP08581 1390 aa16.85■□□□□ 0.29
VAMP7-206ENST00000488344 COL16A1Q07092 1604 aaPredicted RBP16.85■□□□□ 0.29
VAMP7-206ENST00000488344 BRINP3Q76B58 766 aa16.83■□□□□ 0.28
VAMP7-206ENST00000488344 ADGRL3Q9HAR2 1447 aa16.83■□□□□ 0.28
VAMP7-206ENST00000488344 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.28
VAMP7-206ENST00000488344 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
VAMP7-206ENST00000488344 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
VAMP7-206ENST00000488344 POTEAQ6S8J7 498 aa16.81■□□□□ 0.28
VAMP7-206ENST00000488344 MST1RQ04912 1400 aa16.8■□□□□ 0.28
VAMP7-206ENST00000488344 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
VAMP7-206ENST00000488344 KIF1BO60333 1816 aa16.8■□□□□ 0.28
VAMP7-206ENST00000488344 ZNF772Q68DY9 489 aaPredicted RBP16.79■□□□□ 0.28
VAMP7-206ENST00000488344 CCDC144AA2RUR9 1427 aa16.78■□□□□ 0.28
VAMP7-206ENST00000488344 PRAG1Q86YV5 1406 aa16.78■□□□□ 0.28
VAMP7-206ENST00000488344 LRRC59Q96AG4 307 aaKnown RBP16.77■□□□□ 0.28
VAMP7-206ENST00000488344 SHPRHQ149N8 1683 aa16.77■□□□□ 0.28
VAMP7-206ENST00000488344 SETD5Q9C0A6 1442 aa16.77■□□□□ 0.27
VAMP7-206ENST00000488344 LRP6O75581 1613 aa16.75■□□□□ 0.27
VAMP7-206ENST00000488344 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
VAMP7-206ENST00000488344 ANKRD30BQ9BXX2 1392 aa16.73■□□□□ 0.27
VAMP7-206ENST00000488344 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
VAMP7-206ENST00000488344 C1orf167Q5SNV9 1468 aa16.72■□□□□ 0.27
VAMP7-206ENST00000488344 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
VAMP7-206ENST00000488344 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
VAMP7-206ENST00000488344 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
VAMP7-206ENST00000488344 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
VAMP7-206ENST00000488344 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
VAMP7-206ENST00000488344 NALCNQ8IZF0 1738 aa16.7■□□□□ 0.26
VAMP7-206ENST00000488344 SPATA31E1Q6ZUB1 1445 aa16.68■□□□□ 0.26
VAMP7-206ENST00000488344 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms