RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 SOWAHBA6NEL2 793 aa7.34□□□□□ -1.23
RBM28-207ENST00000488249 NLRP7Q8WX94 980 aa7.34□□□□□ -1.23
RBM28-207ENST00000488249 LRCH3Q96II8 777 aa7.34□□□□□ -1.23
RBM28-207ENST00000488249 BCAMP50895 628 aa7.33□□□□□ -1.24
RBM28-207ENST00000488249 AMHR2Q16671 573 aa7.33□□□□□ -1.24
RBM28-207ENST00000488249 THSD4Q6ZMP0 1018 aa7.33□□□□□ -1.24
RBM28-207ENST00000488249 DAXXQ9UER7 740 aaPredicted RBP7.33□□□□□ -1.24
RBM28-207ENST00000488249 MDM2Q00987 491 aaPredicted RBP7.32□□□□□ -1.24
RBM28-207ENST00000488249 SLF2Q8IX21 1173 aa7.32□□□□□ -1.24
RBM28-207ENST00000488249 SLC4A3P48751 1232 aa7.31□□□□□ -1.24
RBM28-207ENST00000488249 RNF40O75150 1001 aa7.3□□□□□ -1.24
RBM28-207ENST00000488249 CLCN1P35523 988 aa7.3□□□□□ -1.24
RBM28-207ENST00000488249 TMUB1Q9BVT8 246 aa7.3□□□□□ -1.24
RBM28-207ENST00000488249 GPCPD1Q9NPB8 672 aa7.3□□□□□ -1.24
RBM28-207ENST00000488249 TSR3Q9UJK0 312 aaKnown RBP7.3□□□□□ -1.24
RBM28-207ENST00000488249 HPS5Q9UPZ3 1129 aa7.3□□□□□ -1.24
RBM28-207ENST00000488249 PTPN5P54829 565 aa7.29□□□□□ -1.24
RBM28-207ENST00000488249 PPP4CP60510 307 aa7.29□□□□□ -1.24
RBM28-207ENST00000488249 PDE4DQ08499 809 aa7.29□□□□□ -1.24
RBM28-207ENST00000488249 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
RBM28-207ENST00000488249 TTLL12Q14166 644 aaPredicted RBP7.28□□□□□ -1.24
RBM28-207ENST00000488249 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
RBM28-207ENST00000488249 WBP1LQ9NX94 342 aa7.28□□□□□ -1.24
RBM28-207ENST00000488249 HCSTQ9UBK5 93 aa7.28□□□□□ -1.24
RBM28-207ENST00000488249 DDX11L8A8MPP1 907 aa7.27□□□□□ -1.25
RBM28-207ENST00000488249 SLC10A3P09131 477 aa7.27□□□□□ -1.25
RBM28-207ENST00000488249 RSPH4AQ5TD94 716 aa7.27□□□□□ -1.25
RBM28-207ENST00000488249 SULF1Q8IWU6 871 aa7.27□□□□□ -1.25
RBM28-207ENST00000488249 PARP9Q8IXQ6 854 aa7.27□□□□□ -1.25
RBM28-207ENST00000488249 GIGYF2Q6Y7W6 1299 aaKnown RBP7.26□□□□□ -1.25
RBM28-207ENST00000488249 FAM217BQ9NTX9 383 aaPredicted RBP7.26□□□□□ -1.25
RBM28-207ENST00000488249 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
RBM28-207ENST00000488249 RDH13Q8NBN7 331 aa7.25□□□□□ -1.25
RBM28-207ENST00000488249 CD46P15529 392 aa7.24□□□□□ -1.25
RBM28-207ENST00000488249 SSTR3P32745 418 aaPredicted RBP7.24□□□□□ -1.25
RBM28-207ENST00000488249 CFHP08603 1231 aa7.23□□□□□ -1.25
RBM28-207ENST00000488249 GCGRP47871 477 aa7.22□□□□□ -1.25
RBM28-207ENST00000488249 APLP1P51693 650 aa7.22□□□□□ -1.25
RBM28-207ENST00000488249 KMT5BQ4FZB7 885 aa7.22□□□□□ -1.25
RBM28-207ENST00000488249 PRR14Q9BWN1 585 aa7.22□□□□□ -1.25
RBM28-207ENST00000488249 GPBP1L1Q9HC44 474 aaPredicted RBP7.22□□□□□ -1.25
RBM28-207ENST00000488249 MS4A1P11836 297 aa7.21□□□□□ -1.26
RBM28-207ENST00000488249 BRPF1P55201 1214 aaPredicted RBP7.2□□□□□ -1.26
RBM28-207ENST00000488249 NEUROD2Q15784 382 aa7.2□□□□□ -1.26
RBM28-207ENST00000488249 KDM4CQ9H3R0 1056 aa7.2□□□□□ -1.26
RBM28-207ENST00000488249 ACTN4O43707 911 aaKnown RBP7.19□□□□□ -1.26
RBM28-207ENST00000488249 BEGAINQ9BUH8 593 aa7.19□□□□□ -1.26
RBM28-207ENST00000488249 KDM4AO75164 1064 aa7.17□□□□□ -1.26
RBM28-207ENST00000488249 PCDHB3Q9Y5E6 796 aa7.17□□□□□ -1.26
RBM28-207ENST00000488249 ATP6V1AP38606 617 aa7.16□□□□□ -1.26
RBM28-207ENST00000488249 FUT2Q10981 343 aa7.16□□□□□ -1.26
RBM28-207ENST00000488249 NUTM1Q86Y26 1132 aa7.16□□□□□ -1.26
RBM28-207ENST00000488249 USP46P62068 366 aa7.15□□□□□ -1.26
RBM28-207ENST00000488249 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
RBM28-207ENST00000488249 FAM117AQ9C073 453 aa7.15□□□□□ -1.26
RBM28-207ENST00000488249 COPS2P61201 443 aa7.14□□□□□ -1.27
RBM28-207ENST00000488249 PUS10Q3MIT2 529 aaKnown RBP7.14□□□□□ -1.27
RBM28-207ENST00000488249 GRIPAP1Q4V328 841 aa7.14□□□□□ -1.27
RBM28-207ENST00000488249 TJAP1Q5JTD0 557 aa7.14□□□□□ -1.27
RBM28-207ENST00000488249 BLOC1S3Q6QNY0 202 aa7.14□□□□□ -1.27
RBM28-207ENST00000488249 DDRGK1Q96HY6 314 aa7.14□□□□□ -1.27
RBM28-207ENST00000488249 MTRQ99707 1265 aa7.14□□□□□ -1.27
RBM28-207ENST00000488249 ITGBL1O95965 494 aaPredicted RBP7.13□□□□□ -1.27
RBM28-207ENST00000488249 DIXDC1Q155Q3 683 aa7.13□□□□□ -1.27
RBM28-207ENST00000488249 MORN1Q5T089 497 aa7.13□□□□□ -1.27
RBM28-207ENST00000488249 IL21Q9HBE4 155 aa7.13□□□□□ -1.27
RBM28-207ENST00000488249 HOXA2O43364 376 aa7.12□□□□□ -1.27
RBM28-207ENST00000488249 NR1I2O75469 434 aa7.12□□□□□ -1.27
RBM28-207ENST00000488249 KCNC4Q03721 635 aa7.12□□□□□ -1.27
RBM28-207ENST00000488249 TBC1D2Q9BYX2 928 aa7.12□□□□□ -1.27
RBM28-207ENST00000488249 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
RBM28-207ENST00000488249 SCUBE3Q8IX30 993 aa7.11□□□□□ -1.27
RBM28-207ENST00000488249 ZNF516Q92618 1163 aa7.11□□□□□ -1.27
RBM28-207ENST00000488249 MOXD2PA6NHM9 499 aa7.1□□□□□ -1.27
RBM28-207ENST00000488249 ZPR1O75312 459 aa7.1□□□□□ -1.27
RBM28-207ENST00000488249 IL27Q8NEV9 243 aa7.1□□□□□ -1.27
RBM28-207ENST00000488249 HLA-CQ95604 372 aa7.1□□□□□ -1.27
RBM28-207ENST00000488249 RSPH6AQ9H0K4 717 aa7.1□□□□□ -1.27
RBM28-207ENST00000488249 PLA2G2EQ9NZK7 142 aa7.1□□□□□ -1.27
RBM28-207ENST00000488249 SLC27A5Q9Y2P5 690 aa7.1□□□□□ -1.27
RBM28-207ENST00000488249 NDUFV2P19404 249 aa7.09□□□□□ -1.27
RBM28-207ENST00000488249 MYSM1Q5VVJ2 828 aa7.09□□□□□ -1.27
RBM28-207ENST00000488249 FDX1P10109 184 aa7.08□□□□□ -1.28
RBM28-207ENST00000488249 GUCA2AQ02747 115 aa7.08□□□□□ -1.28
RBM28-207ENST00000488249 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
RBM28-207ENST00000488249 SPTLC1O15269 473 aa7.07□□□□□ -1.28
RBM28-207ENST00000488249 GJA5P36382 358 aa7.07□□□□□ -1.28
RBM28-207ENST00000488249 Q3C1V9 767 aa7.07□□□□□ -1.28
RBM28-207ENST00000488249 RSBN1LQ6PCB5 846 aaPredicted RBP7.07□□□□□ -1.28
RBM28-207ENST00000488249 RIC3Q7Z5B4 369 aa7.07□□□□□ -1.28
RBM28-207ENST00000488249 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
RBM28-207ENST00000488249 TLL1O43897 1013 aa7.06□□□□□ -1.28
RBM28-207ENST00000488249 FMNL1O95466 1100 aaPredicted RBP7.06□□□□□ -1.28
RBM28-207ENST00000488249 SH3D19Q5HYK7 790 aa7.06□□□□□ -1.28
RBM28-207ENST00000488249 BRICD5Q6PL45 260 aa7.06□□□□□ -1.28
RBM28-207ENST00000488249 NKX2-3Q8TAU0 364 aa7.06□□□□□ -1.28
RBM28-207ENST00000488249 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
RBM28-207ENST00000488249 PCDHGC3Q9UN70 934 aa7.06□□□□□ -1.28
RBM28-207ENST00000488249 ADH1BP00325 375 aa7.05□□□□□ -1.28
RBM28-207ENST00000488249 SKIV2LQ15477 1246 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms