RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
TRIM50-203ENST00000488217 NUP155O75694 1391 aa23.4■■□□□ 1.34
TRIM50-203ENST00000488217 TET3O43151 1660 aa23.39■■□□□ 1.34
TRIM50-203ENST00000488217 TBX22Q9Y458 520 aa23.39■■□□□ 1.33
TRIM50-203ENST00000488217 FAM135BQ49AJ0 1406 aa23.36■■□□□ 1.33
TRIM50-203ENST00000488217 KDM5AP29375 1690 aaKnown RBP23.36■■□□□ 1.33
TRIM50-203ENST00000488217 NUTM2DQ5VT03 806 aaPredicted RBP23.36■■□□□ 1.33
TRIM50-203ENST00000488217 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
TRIM50-203ENST00000488217 RIMS2Q9UQ26 1411 aa23.35■■□□□ 1.33
TRIM50-203ENST00000488217 ADGRB3O60242 1522 aa23.34■■□□□ 1.33
TRIM50-203ENST00000488217 ZFYVE9O95405 1425 aa23.33■■□□□ 1.33
TRIM50-203ENST00000488217 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
TRIM50-203ENST00000488217 MED1Q15648 1581 aaPredicted RBP23.31■■□□□ 1.32
TRIM50-203ENST00000488217 MSH6P52701 1360 aa23.27■■□□□ 1.32
TRIM50-203ENST00000488217 UNC13BO14795 1591 aa23.24■■□□□ 1.31
TRIM50-203ENST00000488217 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
TRIM50-203ENST00000488217 RGS17Q9UGC6 210 aaPredicted RBP23.24■■□□□ 1.31
TRIM50-203ENST00000488217 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
TRIM50-203ENST00000488217 TMEM131LA2VDJ0 1609 aa23.23■■□□□ 1.31
TRIM50-203ENST00000488217 C19orf44Q9H6X5 657 aa23.23■■□□□ 1.31
TRIM50-203ENST00000488217 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
TRIM50-203ENST00000488217 ZNF326Q5BKZ1 582 aaKnown RBP23.21■■□□□ 1.31
TRIM50-203ENST00000488217 ADAMTS13Q76LX8 1427 aa23.2■■□□□ 1.3
TRIM50-203ENST00000488217 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
TRIM50-203ENST00000488217 PIK3R4Q99570 1358 aa23.2■■□□□ 1.3
TRIM50-203ENST00000488217 XIRP1Q702N8 1843 aaKnown RBP23.19■■□□□ 1.3
TRIM50-203ENST00000488217 ATF3P18847 181 aa23.18■■□□□ 1.3
TRIM50-203ENST00000488217 CADPS2Q86UW7 1296 aa23.18■■□□□ 1.3
TRIM50-203ENST00000488217 E9PCH4 1651 aa23.17■■□□□ 1.3
TRIM50-203ENST00000488217 IQGAP3Q86VI3 1631 aa23.17■■□□□ 1.3
TRIM50-203ENST00000488217 GCC2Q8IWJ2 1684 aa23.16■■□□□ 1.3
TRIM50-203ENST00000488217 NWD1Q149M9 1564 aa23.16■■□□□ 1.3
TRIM50-203ENST00000488217 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
TRIM50-203ENST00000488217 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
TRIM50-203ENST00000488217 NAIPQ13075 1403 aa23.1■■□□□ 1.29
TRIM50-203ENST00000488217 POTEAQ6S8J7 498 aa23.1■■□□□ 1.29
TRIM50-203ENST00000488217 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
TRIM50-203ENST00000488217 JCADQ9P266 1359 aa23.09■■□□□ 1.29
TRIM50-203ENST00000488217 CHD2O14647 1828 aaKnown RBP23.08■■□□□ 1.29
TRIM50-203ENST00000488217 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.28
TRIM50-203ENST00000488217 ROBO1Q9Y6N7 1651 aa23.07■■□□□ 1.28
TRIM50-203ENST00000488217 SLC4A1APQ9BWU0 796 aaKnown RBP23.06■■□□□ 1.28
TRIM50-203ENST00000488217 METP08581 1390 aa23.05■■□□□ 1.28
TRIM50-203ENST00000488217 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
TRIM50-203ENST00000488217 DIP2AQ14689 1571 aa23.04■■□□□ 1.28
TRIM50-203ENST00000488217 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
TRIM50-203ENST00000488217 TRPM2O94759 1503 aa23.02■■□□□ 1.28
TRIM50-203ENST00000488217 SPATA31A6Q5VVP1 1343 aa23■■□□□ 1.27
TRIM50-203ENST00000488217 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
TRIM50-203ENST00000488217 HFM1A2PYH4 1435 aa22.98■■□□□ 1.27
TRIM50-203ENST00000488217 MEX3CQ5U5Q3 659 aaKnown RBP22.96■■□□□ 1.27
TRIM50-203ENST00000488217 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
TRIM50-203ENST00000488217 FOXD1Q16676 465 aa22.94■■□□□ 1.26
TRIM50-203ENST00000488217 DCCP43146 1447 aa22.93■■□□□ 1.26
TRIM50-203ENST00000488217 LRRC59Q96AG4 307 aaKnown RBP22.93■■□□□ 1.26
TRIM50-203ENST00000488217 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.93■■□□□ 1.26
TRIM50-203ENST00000488217 PHLPP1O60346 1717 aa22.92■■□□□ 1.26
TRIM50-203ENST00000488217 SPHKAPQ2M3C7 1700 aa22.92■■□□□ 1.26
TRIM50-203ENST00000488217 ZNF772Q68DY9 489 aaPredicted RBP22.92■■□□□ 1.26
TRIM50-203ENST00000488217 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
TRIM50-203ENST00000488217 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
TRIM50-203ENST00000488217 NUTM2AQ8IVF1 878 aaPredicted RBP22.91■■□□□ 1.26
TRIM50-203ENST00000488217 MPHOSPH9Q99550 1183 aa22.9■■□□□ 1.26
TRIM50-203ENST00000488217 MST1RQ04912 1400 aa22.89■■□□□ 1.25
TRIM50-203ENST00000488217 CLTCL1P53675 1640 aa22.89■■□□□ 1.25
TRIM50-203ENST00000488217 NRXN3Q9Y4C0 1643 aa22.89■■□□□ 1.25
TRIM50-203ENST00000488217 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
TRIM50-203ENST00000488217 RGL3Q3MIN7 710 aa22.88■■□□□ 1.25
TRIM50-203ENST00000488217 DDX17Q92841 729 aaKnown RBP22.88■■□□□ 1.25
TRIM50-203ENST00000488217 COL16A1Q07092 1604 aaPredicted RBP22.87■■□□□ 1.25
TRIM50-203ENST00000488217 AHDC1Q5TGY3 1603 aaPredicted RBP22.86■■□□□ 1.25
TRIM50-203ENST00000488217 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
TRIM50-203ENST00000488217 ROBO2Q9HCK4 1378 aa22.85■■□□□ 1.25
TRIM50-203ENST00000488217 SETD5Q9C0A6 1442 aa22.83■■□□□ 1.25
TRIM50-203ENST00000488217 XRN1Q8IZH2 1706 aaKnown RBP22.83■■□□□ 1.25
TRIM50-203ENST00000488217 ORAI2Q96SN7 254 aa22.83■■□□□ 1.25
TRIM50-203ENST00000488217 LRP6O75581 1613 aa22.82■■□□□ 1.24
TRIM50-203ENST00000488217 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
TRIM50-203ENST00000488217 RXRBP28702 533 aa22.81■■□□□ 1.24
TRIM50-203ENST00000488217 ASXL1Q8IXJ9 1541 aa22.81■■□□□ 1.24
TRIM50-203ENST00000488217 ACIN1Q9UKV3 1341 aaKnown RBP22.81■■□□□ 1.24
TRIM50-203ENST00000488217 C1orf167Q5SNV9 1468 aa22.79■■□□□ 1.24
TRIM50-203ENST00000488217 STK26Q9P289 416 aa22.78■■□□□ 1.24
TRIM50-203ENST00000488217 CCDC144AA2RUR9 1427 aa22.77■■□□□ 1.24
TRIM50-203ENST00000488217 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
TRIM50-203ENST00000488217 KIF1BO60333 1816 aa22.76■■□□□ 1.23
TRIM50-203ENST00000488217 AFF2P51816 1311 aa22.76■■□□□ 1.23
TRIM50-203ENST00000488217 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
TRIM50-203ENST00000488217 TMEM132EQ6IEE7 984 aa22.75■■□□□ 1.23
TRIM50-203ENST00000488217 WAPLQ7Z5K2 1190 aa22.75■■□□□ 1.23
TRIM50-203ENST00000488217 C8orf37Q96NL8 207 aa22.75■■□□□ 1.23
TRIM50-203ENST00000488217 ANKRD30BQ9BXX2 1392 aa22.75■■□□□ 1.23
TRIM50-203ENST00000488217 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
TRIM50-203ENST00000488217 QTRT2Q9H974 415 aaKnown RBP22.74■■□□□ 1.23
TRIM50-203ENST00000488217 PNPLA6Q8IY17 1366 aa22.74■■□□□ 1.23
TRIM50-203ENST00000488217 NGLY1Q96IV0 654 aa22.73■■□□□ 1.23
TRIM50-203ENST00000488217 SPATA31E1Q6ZUB1 1445 aa22.73■■□□□ 1.23
TRIM50-203ENST00000488217 ADAMTS2O95450 1211 aa22.72■■□□□ 1.23
TRIM50-203ENST00000488217 PRAG1Q86YV5 1406 aa22.72■■□□□ 1.23
TRIM50-203ENST00000488217 UPF1Q92900 1129 aaKnown RBP eCLIP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms