RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-214ENST00000488128 A2MP01023 1474 aa18.35■□□□□ 0.53
COL16A1-214ENST00000488128 GZF1Q9H116 711 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-214ENST00000488128 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
COL16A1-214ENST00000488128 RRAGDQ9NQL2 400 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-214ENST00000488128 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
COL16A1-214ENST00000488128 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-214ENST00000488128 PLCH2O75038 1416 aa18.34■□□□□ 0.53
COL16A1-214ENST00000488128 PPP2R1AP30153 589 aa18.33■□□□□ 0.53
COL16A1-214ENST00000488128 APAF1O14727 1248 aa18.33■□□□□ 0.52
COL16A1-214ENST00000488128 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.52
COL16A1-214ENST00000488128 TMF1P82094 1093 aa18.32■□□□□ 0.52
COL16A1-214ENST00000488128 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
COL16A1-214ENST00000488128 E9PCH4 1651 aa18.32■□□□□ 0.52
COL16A1-214ENST00000488128 USP19O94966 1318 aa18.32■□□□□ 0.52
COL16A1-214ENST00000488128 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
COL16A1-214ENST00000488128 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
COL16A1-214ENST00000488128 SPAG9O60271 1321 aaKnown RBP18.3■□□□□ 0.52
COL16A1-214ENST00000488128 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
COL16A1-214ENST00000488128 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
COL16A1-214ENST00000488128 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
COL16A1-214ENST00000488128 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
COL16A1-214ENST00000488128 UNC13BO14795 1591 aa18.29■□□□□ 0.52
COL16A1-214ENST00000488128 MAST1Q9Y2H9 1570 aa18.29■□□□□ 0.52
COL16A1-214ENST00000488128 SLFN5Q08AF3 891 aa18.29■□□□□ 0.52
COL16A1-214ENST00000488128 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
COL16A1-214ENST00000488128 DUOX2Q9NRD8 1548 aa18.28■□□□□ 0.52
COL16A1-214ENST00000488128 ZCCHC11Q5TAX3 1644 aaKnown RBP18.27■□□□□ 0.51
COL16A1-214ENST00000488128 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
COL16A1-214ENST00000488128 TRPM1Q7Z4N2 1603 aa18.26■□□□□ 0.51
COL16A1-214ENST00000488128 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
COL16A1-214ENST00000488128 PANK2Q9BZ23 570 aa18.25■□□□□ 0.51
COL16A1-214ENST00000488128 BCL2L13Q9BXK5 485 aa18.24■□□□□ 0.51
COL16A1-214ENST00000488128 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
COL16A1-214ENST00000488128 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
COL16A1-214ENST00000488128 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
COL16A1-214ENST00000488128 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-214ENST00000488128 TNNQ9UQP3 1299 aa18.23■□□□□ 0.51
COL16A1-214ENST00000488128 BECN1Q14457 450 aa18.22■□□□□ 0.51
COL16A1-214ENST00000488128 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-214ENST00000488128 CLUAP1Q96AJ1 413 aa18.21■□□□□ 0.51
COL16A1-214ENST00000488128 ABCC1P33527 1531 aa18.21■□□□□ 0.51
COL16A1-214ENST00000488128 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
COL16A1-214ENST00000488128 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
COL16A1-214ENST00000488128 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.5
COL16A1-214ENST00000488128 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
COL16A1-214ENST00000488128 KIF3BO15066 747 aa18.2■□□□□ 0.5
COL16A1-214ENST00000488128 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-214ENST00000488128 UHRF1BP1LA0JNW5 1464 aa18.19■□□□□ 0.5
COL16A1-214ENST00000488128 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
COL16A1-214ENST00000488128 TBC1D2Q9BYX2 928 aa18.18■□□□□ 0.5
COL16A1-214ENST00000488128 PRDM15P57071 1507 aaPredicted RBP18.17■□□□□ 0.5
COL16A1-214ENST00000488128 ATP10AO60312 1499 aa18.17■□□□□ 0.5
COL16A1-214ENST00000488128 ANTXR1Q9H6X2 564 aa18.16■□□□□ 0.5
COL16A1-214ENST00000488128 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
COL16A1-214ENST00000488128 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
COL16A1-214ENST00000488128 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
COL16A1-214ENST00000488128 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.49
COL16A1-214ENST00000488128 EIF3AQ14152 1382 aaKnown RBP18.14■□□□□ 0.49
COL16A1-214ENST00000488128 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
COL16A1-214ENST00000488128 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
COL16A1-214ENST00000488128 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
COL16A1-214ENST00000488128 RLBP1P12271 317 aa18.13■□□□□ 0.49
COL16A1-214ENST00000488128 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
COL16A1-214ENST00000488128 FANCAO15360 1455 aa18.13■□□□□ 0.49
COL16A1-214ENST00000488128 E9PSI1 815 aa18.12■□□□□ 0.49
COL16A1-214ENST00000488128 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
COL16A1-214ENST00000488128 ZFYVE16Q7Z3T8 1539 aa18.12■□□□□ 0.49
COL16A1-214ENST00000488128 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
COL16A1-214ENST00000488128 WDR7Q9Y4E6 1490 aa18.11■□□□□ 0.49
COL16A1-214ENST00000488128 CGNL1Q0VF96 1302 aa18.11■□□□□ 0.49
COL16A1-214ENST00000488128 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
COL16A1-214ENST00000488128 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
COL16A1-214ENST00000488128 MFAP1P55081 439 aaKnown RBP18.1■□□□□ 0.49
COL16A1-214ENST00000488128 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
COL16A1-214ENST00000488128 EIF2AK4Q9P2K8 1649 aaKnown RBP18.1■□□□□ 0.49
COL16A1-214ENST00000488128 INSRP06213 1382 aa18.09■□□□□ 0.49
COL16A1-214ENST00000488128 KANK1Q14678 1352 aa18.09■□□□□ 0.49
COL16A1-214ENST00000488128 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
COL16A1-214ENST00000488128 TBC1D32Q96NH3 1257 aa18.09■□□□□ 0.49
COL16A1-214ENST00000488128 MCM4P33991 863 aa18.08■□□□□ 0.48
COL16A1-214ENST00000488128 WWC1Q8IX03 1113 aa18.08■□□□□ 0.48
COL16A1-214ENST00000488128 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
COL16A1-214ENST00000488128 PDE3AQ14432 1141 aa18.06■□□□□ 0.48
COL16A1-214ENST00000488128 CHGAP10645 457 aaKnown RBP18.06■□□□□ 0.48
COL16A1-214ENST00000488128 LAMC1P11047 1609 aa18.06■□□□□ 0.48
COL16A1-214ENST00000488128 PTPRTO14522 1441 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 TRAK2O60296 914 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 ATP7AQ04656 1500 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 UGGT1Q9NYU2 1555 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 TRPM2O94759 1503 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 ADGRF5Q8IZF2 1346 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 ASXL2Q76L83 1435 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
COL16A1-214ENST00000488128 MADDQ8WXG6 1647 aa18.04■□□□□ 0.48
COL16A1-214ENST00000488128 PKNOX2Q96KN3 472 aa18.04■□□□□ 0.48
COL16A1-214ENST00000488128 RARSP54136 660 aaKnown RBP18.02■□□□□ 0.48
COL16A1-214ENST00000488128 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.48
COL16A1-214ENST00000488128 SCAF11Q99590 1463 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms