RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TXNDC2Q86VQ3 553 aa19.36■□□□□ 0.69
COL4A6-207ENST00000487645 RGL3Q3MIN7 710 aa19.35■□□□□ 0.69
COL4A6-207ENST00000487645 ZFYVE9O95405 1425 aa19.34■□□□□ 0.69
COL4A6-207ENST00000487645 RIMS2Q9UQ26 1411 aa19.34■□□□□ 0.69
COL4A6-207ENST00000487645 LTKP29376 864 aa19.34■□□□□ 0.69
COL4A6-207ENST00000487645 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
COL4A6-207ENST00000487645 SIN3AQ96ST3 1273 aa19.34■□□□□ 0.69
COL4A6-207ENST00000487645 NCKAP5LQ9HCH0 1330 aa19.33■□□□□ 0.69
COL4A6-207ENST00000487645 PPLO60437 1756 aa19.33■□□□□ 0.68
COL4A6-207ENST00000487645 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
COL4A6-207ENST00000487645 SCAF11Q99590 1463 aaKnown RBP19.32■□□□□ 0.68
COL4A6-207ENST00000487645 NEXMIFQ5QGS0 1516 aa19.31■□□□□ 0.68
COL4A6-207ENST00000487645 MED14O60244 1454 aa19.31■□□□□ 0.68
COL4A6-207ENST00000487645 VGFO15240 615 aaPredicted RBP19.31■□□□□ 0.68
COL4A6-207ENST00000487645 NEUROD1Q13562 356 aa19.31■□□□□ 0.68
COL4A6-207ENST00000487645 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
COL4A6-207ENST00000487645 IFT172Q9UG01 1749 aa19.31■□□□□ 0.68
COL4A6-207ENST00000487645 PPP1R15AO75807 674 aaPredicted RBP19.28■□□□□ 0.68
COL4A6-207ENST00000487645 NPHP4O75161 1426 aaPredicted RBP19.26■□□□□ 0.67
COL4A6-207ENST00000487645 NUTM2DQ5VT03 806 aaPredicted RBP19.26■□□□□ 0.67
COL4A6-207ENST00000487645 PLEKHG1Q9ULL1 1385 aa19.26■□□□□ 0.67
COL4A6-207ENST00000487645 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
COL4A6-207ENST00000487645 DCAF11Q8TEB1 546 aa19.25■□□□□ 0.67
COL4A6-207ENST00000487645 L3MBTL2Q969R5 705 aa19.22■□□□□ 0.67
COL4A6-207ENST00000487645 BCANQ96GW7 911 aa19.22■□□□□ 0.67
COL4A6-207ENST00000487645 TIMELESSQ9UNS1 1208 aa19.22■□□□□ 0.67
COL4A6-207ENST00000487645 MYOM2P54296 1465 aa19.22■□□□□ 0.67
COL4A6-207ENST00000487645 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
COL4A6-207ENST00000487645 ADGRF5Q8IZF2 1346 aa19.21■□□□□ 0.67
COL4A6-207ENST00000487645 SETBP1Q9Y6X0 1596 aa19.2■□□□□ 0.66
COL4A6-207ENST00000487645 TBX22Q9Y458 520 aa19.2■□□□□ 0.66
COL4A6-207ENST00000487645 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
COL4A6-207ENST00000487645 NRXN1Q9ULB1 1477 aa19.18■□□□□ 0.66
COL4A6-207ENST00000487645 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
COL4A6-207ENST00000487645 SLC26A8Q96RN1 970 aa19.17■□□□□ 0.66
COL4A6-207ENST00000487645 DIP2AQ14689 1571 aa19.17■□□□□ 0.66
COL4A6-207ENST00000487645 ADAMTS13Q76LX8 1427 aa19.16■□□□□ 0.66
COL4A6-207ENST00000487645 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
COL4A6-207ENST00000487645 ALKQ9UM73 1620 aa19.14■□□□□ 0.66
COL4A6-207ENST00000487645 C14orf93Q9H972 538 aaKnown RBP19.14■□□□□ 0.65
COL4A6-207ENST00000487645 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
COL4A6-207ENST00000487645 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
COL4A6-207ENST00000487645 SETD1AO15047 1707 aaKnown RBP19.12■□□□□ 0.65
COL4A6-207ENST00000487645 LAMC1P11047 1609 aa19.12■□□□□ 0.65
COL4A6-207ENST00000487645 PIK3R4Q99570 1358 aa19.12■□□□□ 0.65
COL4A6-207ENST00000487645 KIAA1210Q9ULL0 1709 aa19.11■□□□□ 0.65
COL4A6-207ENST00000487645 PRAG1Q86YV5 1406 aa19.1■□□□□ 0.65
COL4A6-207ENST00000487645 KCNA6P17658 529 aa19.09■□□□□ 0.65
COL4A6-207ENST00000487645 CFAP70Q5T0N1 1121 aa19.09■□□□□ 0.65
COL4A6-207ENST00000487645 METP08581 1390 aa19.07■□□□□ 0.64
COL4A6-207ENST00000487645 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
COL4A6-207ENST00000487645 ZNF335Q9H4Z2 1342 aaPredicted RBP19.05■□□□□ 0.64
COL4A6-207ENST00000487645 NBPF8Q3BBV2 869 aa19.05■□□□□ 0.64
COL4A6-207ENST00000487645 AMOTL2Q9Y2J4 779 aa19.04■□□□□ 0.64
COL4A6-207ENST00000487645 NWD1Q149M9 1564 aa19.03■□□□□ 0.64
COL4A6-207ENST00000487645 TMEM132EQ6IEE7 984 aa19.03■□□□□ 0.64
COL4A6-207ENST00000487645 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
COL4A6-207ENST00000487645 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
COL4A6-207ENST00000487645 CPS1P31327 1500 aa19.01■□□□□ 0.63
COL4A6-207ENST00000487645 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
COL4A6-207ENST00000487645 XRN1Q8IZH2 1706 aaKnown RBP19■□□□□ 0.63
COL4A6-207ENST00000487645 NBPF1Q3BBV0 1214 aa19■□□□□ 0.63
COL4A6-207ENST00000487645 LRPPRCP42704 1394 aaKnown RBP19■□□□□ 0.63
COL4A6-207ENST00000487645 ABCC11Q96J66 1382 aa19■□□□□ 0.63
COL4A6-207ENST00000487645 ADGRB1O14514 1584 aa19■□□□□ 0.63
COL4A6-207ENST00000487645 ASXL1Q8IXJ9 1541 aa19■□□□□ 0.63
COL4A6-207ENST00000487645 NKTRP30414 1462 aaKnown RBP18.99■□□□□ 0.63
COL4A6-207ENST00000487645 SIRT1Q96EB6 747 aa18.99■□□□□ 0.63
COL4A6-207ENST00000487645 YTHDC2Q9H6S0 1430 aaKnown RBP18.99■□□□□ 0.63
COL4A6-207ENST00000487645 KNDC1Q76NI1 1749 aa18.98■□□□□ 0.63
COL4A6-207ENST00000487645 PROSER2Q86WR7 435 aaPredicted RBP18.97■□□□□ 0.63
COL4A6-207ENST00000487645 STK26Q9P289 416 aa18.97■□□□□ 0.63
COL4A6-207ENST00000487645 TECPR2O15040 1411 aa18.97■□□□□ 0.63
COL4A6-207ENST00000487645 RALGAPBQ86X10 1494 aa18.96■□□□□ 0.63
COL4A6-207ENST00000487645 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
COL4A6-207ENST00000487645 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
COL4A6-207ENST00000487645 NCOA3Q9Y6Q9 1424 aa18.94■□□□□ 0.62
COL4A6-207ENST00000487645 XIRP1Q702N8 1843 aaKnown RBP18.94■□□□□ 0.62
COL4A6-207ENST00000487645 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
COL4A6-207ENST00000487645 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
COL4A6-207ENST00000487645 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
COL4A6-207ENST00000487645 DLC1Q96QB1 1528 aa18.93■□□□□ 0.62
COL4A6-207ENST00000487645 FAM135BQ49AJ0 1406 aa18.92■□□□□ 0.62
COL4A6-207ENST00000487645 ROBO2Q9HCK4 1378 aa18.92■□□□□ 0.62
COL4A6-207ENST00000487645 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
COL4A6-207ENST00000487645 CARD11Q9BXL7 1154 aa18.9■□□□□ 0.62
COL4A6-207ENST00000487645 TMEM94Q12767 1356 aa18.9■□□□□ 0.62
COL4A6-207ENST00000487645 IQSEC2Q5JU85 1478 aa18.9■□□□□ 0.62
COL4A6-207ENST00000487645 ARHGEF28Q8N1W1 1705 aaKnown RBP18.89■□□□□ 0.61
COL4A6-207ENST00000487645 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
COL4A6-207ENST00000487645 WAPLQ7Z5K2 1190 aa18.88■□□□□ 0.61
COL4A6-207ENST00000487645 PRAM1Q96QH2 718 aa18.87■□□□□ 0.61
COL4A6-207ENST00000487645 POGKQ9P215 609 aa18.87■□□□□ 0.61
COL4A6-207ENST00000487645 RBM33Q96EV2 1170 aaKnown RBP18.86■□□□□ 0.61
COL4A6-207ENST00000487645 C19orf44Q9H6X5 657 aa18.86■□□□□ 0.61
COL4A6-207ENST00000487645 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.84■□□□□ 0.61
COL4A6-207ENST00000487645 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
COL4A6-207ENST00000487645 EIF3AQ14152 1382 aaKnown RBP18.83■□□□□ 0.61
COL4A6-207ENST00000487645 PLEKHH1Q9ULM0 1364 aa18.83■□□□□ 0.61
COL4A6-207ENST00000487645 MSH6P52701 1360 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms