RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
CTPS1-210ENST00000486889 ADGRB3O60242 1522 aa13.98□□□□□ -0.17
CTPS1-210ENST00000486889 CLTCL1P53675 1640 aa13.97□□□□□ -0.17
CTPS1-210ENST00000486889 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
CTPS1-210ENST00000486889 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
CTPS1-210ENST00000486889 BCANQ96GW7 911 aa13.96□□□□□ -0.17
CTPS1-210ENST00000486889 SIN3AQ96ST3 1273 aa13.96□□□□□ -0.17
CTPS1-210ENST00000486889 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
CTPS1-210ENST00000486889 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
CTPS1-210ENST00000486889 TMEM2Q9UHN6 1383 aa13.94□□□□□ -0.18
CTPS1-210ENST00000486889 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
CTPS1-210ENST00000486889 TMEM131LA2VDJ0 1609 aa13.93□□□□□ -0.18
CTPS1-210ENST00000486889 UBR1Q8IWV7 1749 aa13.92□□□□□ -0.18
CTPS1-210ENST00000486889 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
CTPS1-210ENST00000486889 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
CTPS1-210ENST00000486889 KDM2AQ9Y2K7 1162 aa13.91□□□□□ -0.18
CTPS1-210ENST00000486889 STRCQ7RTU9 1775 aa13.91□□□□□ -0.18
CTPS1-210ENST00000486889 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
CTPS1-210ENST00000486889 SLIT1O75093 1534 aa13.89□□□□□ -0.19
CTPS1-210ENST00000486889 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
CTPS1-210ENST00000486889 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
CTPS1-210ENST00000486889 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
CTPS1-210ENST00000486889 MYOM2P54296 1465 aa13.87□□□□□ -0.19
CTPS1-210ENST00000486889 ADRA2BP18089 450 aa13.86□□□□□ -0.19
CTPS1-210ENST00000486889 ARHGAP23Q9P227 1491 aa13.86□□□□□ -0.19
CTPS1-210ENST00000486889 PLEKHG1Q9ULL1 1385 aa13.84□□□□□ -0.19
CTPS1-210ENST00000486889 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
CTPS1-210ENST00000486889 MYO5BQ9ULV0 1848 aa13.84□□□□□ -0.19
CTPS1-210ENST00000486889 NEXMIFQ5QGS0 1516 aa13.84□□□□□ -0.19
CTPS1-210ENST00000486889 PPLO60437 1756 aa13.83□□□□□ -0.19
CTPS1-210ENST00000486889 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
CTPS1-210ENST00000486889 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
CTPS1-210ENST00000486889 LAMC1P11047 1609 aa13.81□□□□□ -0.2
CTPS1-210ENST00000486889 LTKP29376 864 aa13.8□□□□□ -0.2
CTPS1-210ENST00000486889 TBX22Q9Y458 520 aa13.8□□□□□ -0.2
CTPS1-210ENST00000486889 IFT172Q9UG01 1749 aa13.8□□□□□ -0.2
CTPS1-210ENST00000486889 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
CTPS1-210ENST00000486889 MED14O60244 1454 aa13.8□□□□□ -0.2
CTPS1-210ENST00000486889 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
CTPS1-210ENST00000486889 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
CTPS1-210ENST00000486889 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
CTPS1-210ENST00000486889 PIK3C2GO75747 1445 aa13.79□□□□□ -0.2
CTPS1-210ENST00000486889 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
CTPS1-210ENST00000486889 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
CTPS1-210ENST00000486889 PIK3R4Q99570 1358 aa13.78□□□□□ -0.2
CTPS1-210ENST00000486889 IQGAP1P46940 1657 aa13.77□□□□□ -0.21
CTPS1-210ENST00000486889 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.21
CTPS1-210ENST00000486889 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.21
CTPS1-210ENST00000486889 NRXN1Q9ULB1 1477 aa13.77□□□□□ -0.21
CTPS1-210ENST00000486889 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.21
CTPS1-210ENST00000486889 SLC26A8Q96RN1 970 aa13.76□□□□□ -0.21
CTPS1-210ENST00000486889 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
CTPS1-210ENST00000486889 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
CTPS1-210ENST00000486889 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
CTPS1-210ENST00000486889 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
CTPS1-210ENST00000486889 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
CTPS1-210ENST00000486889 LTBP4Q8N2S1 1624 aa13.73□□□□□ -0.21
CTPS1-210ENST00000486889 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
CTPS1-210ENST00000486889 RALGAPBQ86X10 1494 aa13.72□□□□□ -0.21
CTPS1-210ENST00000486889 POGKQ9P215 609 aa13.71□□□□□ -0.21
CTPS1-210ENST00000486889 KCNA6P17658 529 aa13.7□□□□□ -0.22
CTPS1-210ENST00000486889 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
CTPS1-210ENST00000486889 NBPF8Q3BBV2 869 aa13.7□□□□□ -0.22
CTPS1-210ENST00000486889 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
CTPS1-210ENST00000486889 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
CTPS1-210ENST00000486889 TRPM1Q7Z4N2 1603 aa13.69□□□□□ -0.22
CTPS1-210ENST00000486889 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
CTPS1-210ENST00000486889 STK26Q9P289 416 aa13.69□□□□□ -0.22
CTPS1-210ENST00000486889 AMOTL2Q9Y2J4 779 aa13.69□□□□□ -0.22
CTPS1-210ENST00000486889 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
CTPS1-210ENST00000486889 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
CTPS1-210ENST00000486889 YTHDC2Q9H6S0 1430 aaKnown RBP13.68□□□□□ -0.22
CTPS1-210ENST00000486889 TMEM132EQ6IEE7 984 aa13.68□□□□□ -0.22
CTPS1-210ENST00000486889 ABCC11Q96J66 1382 aa13.68□□□□□ -0.22
CTPS1-210ENST00000486889 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
CTPS1-210ENST00000486889 C14orf37Q86TY3 774 aa13.67□□□□□ -0.22
CTPS1-210ENST00000486889 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
CTPS1-210ENST00000486889 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
CTPS1-210ENST00000486889 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
CTPS1-210ENST00000486889 METP08581 1390 aa13.66□□□□□ -0.22
CTPS1-210ENST00000486889 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.22
CTPS1-210ENST00000486889 CDCA8Q53HL2 280 aa13.65□□□□□ -0.22
CTPS1-210ENST00000486889 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
CTPS1-210ENST00000486889 NKTRP30414 1462 aaKnown RBP13.64□□□□□ -0.23
CTPS1-210ENST00000486889 TOM1O60784 492 aa13.64□□□□□ -0.23
CTPS1-210ENST00000486889 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
CTPS1-210ENST00000486889 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
CTPS1-210ENST00000486889 USP47Q96K76 1375 aa13.63□□□□□ -0.23
CTPS1-210ENST00000486889 CPS1P31327 1500 aa13.63□□□□□ -0.23
CTPS1-210ENST00000486889 DLC1Q96QB1 1528 aa13.63□□□□□ -0.23
CTPS1-210ENST00000486889 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
CTPS1-210ENST00000486889 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
CTPS1-210ENST00000486889 TECPR2O15040 1411 aa13.62□□□□□ -0.23
CTPS1-210ENST00000486889 NCOA3Q9Y6Q9 1424 aa13.62□□□□□ -0.23
CTPS1-210ENST00000486889 CHD2O14647 1828 aaKnown RBP13.62□□□□□ -0.23
CTPS1-210ENST00000486889 ADGRB1O14514 1584 aa13.62□□□□□ -0.23
CTPS1-210ENST00000486889 KNDC1Q76NI1 1749 aa13.61□□□□□ -0.23
CTPS1-210ENST00000486889 SETD1AO15047 1707 aaKnown RBP13.6□□□□□ -0.23
CTPS1-210ENST00000486889 TMF1P82094 1093 aa13.6□□□□□ -0.23
CTPS1-210ENST00000486889 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms