RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 IFT172Q9UG01 1749 aa19.56■□□□□ 0.72
SF1-216ENST00000486867 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
SF1-216ENST00000486867 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
SF1-216ENST00000486867 IQSEC2Q5JU85 1478 aa19.54■□□□□ 0.72
SF1-216ENST00000486867 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
SF1-216ENST00000486867 CHD2O14647 1828 aaKnown RBP19.53■□□□□ 0.72
SF1-216ENST00000486867 DIP2AQ14689 1571 aa19.53■□□□□ 0.72
SF1-216ENST00000486867 SPATA31E1Q6ZUB1 1445 aa19.52■□□□□ 0.72
SF1-216ENST00000486867 CPS1P31327 1500 aa19.52■□□□□ 0.72
SF1-216ENST00000486867 FOXD1Q16676 465 aa19.52■□□□□ 0.72
SF1-216ENST00000486867 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.52■□□□□ 0.72
SF1-216ENST00000486867 SETBP1Q9Y6X0 1596 aa19.52■□□□□ 0.71
SF1-216ENST00000486867 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
SF1-216ENST00000486867 CCDC144AA2RUR9 1427 aa19.51■□□□□ 0.71
SF1-216ENST00000486867 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
SF1-216ENST00000486867 NWD1Q149M9 1564 aa19.5■□□□□ 0.71
SF1-216ENST00000486867 ANKRD30BQ9BXX2 1392 aa19.5■□□□□ 0.71
SF1-216ENST00000486867 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
SF1-216ENST00000486867 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
SF1-216ENST00000486867 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
SF1-216ENST00000486867 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
SF1-216ENST00000486867 CERKQ8TCT0 537 aa19.48■□□□□ 0.71
SF1-216ENST00000486867 ADAMTS13Q76LX8 1427 aa19.48■□□□□ 0.71
SF1-216ENST00000486867 RPGRIP1LQ68CZ1 1315 aa19.47■□□□□ 0.71
SF1-216ENST00000486867 TBX22Q9Y458 520 aa19.43■□□□□ 0.7
SF1-216ENST00000486867 PIK3R4Q99570 1358 aa19.42■□□□□ 0.7
SF1-216ENST00000486867 NKTRP30414 1462 aaKnown RBP19.41■□□□□ 0.7
SF1-216ENST00000486867 LRRC7Q96NW7 1537 aa19.41■□□□□ 0.7
SF1-216ENST00000486867 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
SF1-216ENST00000486867 XRN1Q8IZH2 1706 aaKnown RBP19.4■□□□□ 0.7
SF1-216ENST00000486867 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
SF1-216ENST00000486867 SLC26A8Q96RN1 970 aa19.39■□□□□ 0.69
SF1-216ENST00000486867 NRXN1Q9ULB1 1477 aa19.37■□□□□ 0.69
SF1-216ENST00000486867 VGFO15240 615 aaPredicted RBP19.37■□□□□ 0.69
SF1-216ENST00000486867 KCNA6P17658 529 aa19.37■□□□□ 0.69
SF1-216ENST00000486867 NUTM2DQ5VT03 806 aaPredicted RBP19.37■□□□□ 0.69
SF1-216ENST00000486867 FBXO41Q8TF61 875 aa19.37■□□□□ 0.69
SF1-216ENST00000486867 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
SF1-216ENST00000486867 MYOM2P54296 1465 aa19.36■□□□□ 0.69
SF1-216ENST00000486867 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
SF1-216ENST00000486867 LAMC1P11047 1609 aa19.33■□□□□ 0.69
SF1-216ENST00000486867 PIK3C2GO75747 1445 aa19.33■□□□□ 0.68
SF1-216ENST00000486867 PTPRUQ92729 1446 aa19.33■□□□□ 0.68
SF1-216ENST00000486867 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
SF1-216ENST00000486867 METP08581 1390 aa19.31■□□□□ 0.68
SF1-216ENST00000486867 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
SF1-216ENST00000486867 BCANQ96GW7 911 aa19.3■□□□□ 0.68
SF1-216ENST00000486867 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
SF1-216ENST00000486867 ADGRF5Q8IZF2 1346 aa19.29■□□□□ 0.68
SF1-216ENST00000486867 KNDC1Q76NI1 1749 aa19.28■□□□□ 0.68
SF1-216ENST00000486867 ILDR1Q86SU0 546 aaPredicted RBP19.28■□□□□ 0.68
SF1-216ENST00000486867 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.68
SF1-216ENST00000486867 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
SF1-216ENST00000486867 TMEM94Q12767 1356 aa19.26■□□□□ 0.67
SF1-216ENST00000486867 SENP3Q9H4L4 574 aaPredicted RBP19.24■□□□□ 0.67
SF1-216ENST00000486867 KIAA1210Q9ULL0 1709 aa19.24■□□□□ 0.67
SF1-216ENST00000486867 PTCH1Q13635 1447 aa19.24■□□□□ 0.67
SF1-216ENST00000486867 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.23■□□□□ 0.67
SF1-216ENST00000486867 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
SF1-216ENST00000486867 TECPR2O15040 1411 aa19.23■□□□□ 0.67
SF1-216ENST00000486867 PROSER2Q86WR7 435 aaPredicted RBP19.22■□□□□ 0.67
SF1-216ENST00000486867 NALCNQ8IZF0 1738 aa19.21■□□□□ 0.67
SF1-216ENST00000486867 C14orf93Q9H972 538 aaKnown RBP19.2■□□□□ 0.66
SF1-216ENST00000486867 ADGRB1O14514 1584 aa19.19■□□□□ 0.66
SF1-216ENST00000486867 UBAP1LF5GYI3 381 aa19.18■□□□□ 0.66
SF1-216ENST00000486867 DCCP43146 1447 aa19.17■□□□□ 0.66
SF1-216ENST00000486867 TOM1O60784 492 aa19.17■□□□□ 0.66
SF1-216ENST00000486867 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
SF1-216ENST00000486867 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
SF1-216ENST00000486867 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
SF1-216ENST00000486867 MSH6P52701 1360 aa19.15■□□□□ 0.66
SF1-216ENST00000486867 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
SF1-216ENST00000486867 YTHDC2Q9H6S0 1430 aaKnown RBP19.15■□□□□ 0.66
SF1-216ENST00000486867 ADGRL3Q9HAR2 1447 aa19.15■□□□□ 0.66
SF1-216ENST00000486867 DLC1Q96QB1 1528 aa19.14■□□□□ 0.65
SF1-216ENST00000486867 FAM135BQ49AJ0 1406 aa19.12■□□□□ 0.65
SF1-216ENST00000486867 CFAP70Q5T0N1 1121 aa19.12■□□□□ 0.65
SF1-216ENST00000486867 RBM33Q96EV2 1170 aaKnown RBP19.12■□□□□ 0.65
SF1-216ENST00000486867 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
SF1-216ENST00000486867 C19orf44Q9H6X5 657 aa19.12■□□□□ 0.65
SF1-216ENST00000486867 ROBO1Q9Y6N7 1651 aa19.11■□□□□ 0.65
SF1-216ENST00000486867 SIRT1Q96EB6 747 aa19.11■□□□□ 0.65
SF1-216ENST00000486867 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
SF1-216ENST00000486867 ARHGEF28Q8N1W1 1705 aaKnown RBP19.1■□□□□ 0.65
SF1-216ENST00000486867 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
SF1-216ENST00000486867 TMEM132EQ6IEE7 984 aa19.09■□□□□ 0.65
SF1-216ENST00000486867 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
SF1-216ENST00000486867 CDC42BPGQ6DT37 1551 aa19.09■□□□□ 0.65
SF1-216ENST00000486867 L3MBTL2Q969R5 705 aa19.08■□□□□ 0.64
SF1-216ENST00000486867 CLSPNQ9HAW4 1339 aa19.06■□□□□ 0.64
SF1-216ENST00000486867 CADPS2Q86UW7 1296 aa19.06■□□□□ 0.64
SF1-216ENST00000486867 MST1RQ04912 1400 aa19.05■□□□□ 0.64
SF1-216ENST00000486867 ADGRB2O60241 1585 aa19.05■□□□□ 0.64
SF1-216ENST00000486867 FMN2Q9NZ56 1722 aa19.05■□□□□ 0.64
SF1-216ENST00000486867 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
SF1-216ENST00000486867 PIP4K2BP78356 416 aa19.02■□□□□ 0.64
SF1-216ENST00000486867 NEUROD1Q13562 356 aa19.02■□□□□ 0.64
SF1-216ENST00000486867 NHSL1Q5SYE7 1610 aa19.02■□□□□ 0.64
SF1-216ENST00000486867 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.64
SF1-216ENST00000486867 AHDC1Q5TGY3 1603 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms